Oncorhynchus keta (chum salmon): 118394430
Help
Entry
118394430 CDS
T09424
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118394430 (cpdp)
Enzymes [BR:
oke01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
118394430 (cpdp)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118394430 (cpdp)
Prokaryotic type
118394430 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
118394430
NCBI-ProteinID:
XP_035643511
LinkDB
All DBs
Position
15:13158842..13179064
Genome browser
AA seq
551 aa
AA seq
DB search
MHRSLLLIPASKHIWKFVTLESQRHCSFTKLVGPSSINNRTTMPAEKRKATFVKMDNTKR
QKLQAVKEGKRERVEGWLQDVVAEQRKEKKDLKFNKQRLRFLSQTQKIKQGSEGVVYWMN
RDHRVQDNWALIYAQQLALEEKLPLHICFCLVVPQNSELATIRHVGFMLRGLEEVAKDCS
ALDIQFHLLQGSAGELLPGFVADWSFGAVVTDFSPLRTPLQWVEEVKKGLPSDIPFIQVD
AHNVVPCWVASDKLEYSARTIRNKITKLLKEFLTEMPLVDKHPHAALRTAKPVDWAEALS
SLEVDRTVEEVDWAKSGTAAGIAMLESFIDLRLKNFATQRNNPNSSAVSQLSPWIRFGHL
SAQRVVLQVKCCGKSAGESVSSFTEELVVRRELTDNFCFYNPSYDSVKGANDWAQKTLKD
HAKDPRPYVYTREQLEKAQTHDKLWNAAQYQMVIEGKMHGFLRMYWAKKILEWTSSPEGA
LSIAIYLNDRYELDGQDPNGFVGCMWSICGVHDQGWAERPIFGKIRYMNYKGCTRKFDVA
QFERKYCPKDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcagtttgttgctcattccagcatccaagcacatttggaagtttgtgacactc
gagagccaaagacactgctcctttaccaaattagtaggcccaagcagcattaataatcga
accaccatgccagcagaaaaacgcaaggccacatttgtcaaaatggacaacaccaaacgg
cagaagctgcaggctgtaaaagaggggaagagggagagagtagagggctggctgcaggat
gtggtggcagagcagcggaaggagaagaaggacttgaaattcaacaagcagcgcctccgt
tttctgtcccaaacccagaagataaagcaaggttcagagggagtagtctactggatgaac
cgggatcacagggtccaagataactgggcgttgatctatgcccagcagcttgccctcgaa
gagaagctgcccctgcatatctgtttctgtttggtggtaccacaaaactcagagttggcc
accatccgccatgttggcttcatgctgaggggactggaggaagttgcaaaggactgcagt
gccctggatattcagttccacctgctccagggctccgctggagaattgctgccagggttt
gtggcggactggagttttggggcagtagtgaccgacttctcccctctaaggacaccgctg
cagtgggtggaggaggtcaaaaaggggcttccgtcagatatccccttcatacaagtcgat
gcccataacgtggtgccctgctgggtggcatcagacaagctggagtattctgccaggacg
atccgtaacaagatcaccaagcttctgaaggagttcctcacagagatgcctttagtggac
aaacacccacacgctgctctccgaaccgccaaaccagtagactgggcagaggcattgtcc
tctctggaggtggacaggacggtggaggaggtggattgggccaagtctggcactgcagca
ggcatagccatgttggaatctttcatcgacctgcgcctcaagaactttgccactcagagg
aacaaccccaattcttctgccgttagtcagctctcgccgtggatccgcttcggtcacttg
tctgcccagcgcgtggtgctgcaggtaaagtgctgtgggaagagtgccggcgagtccgtt
tcctccttcacagaagaactggtggtgcgcagagagttgaccgataacttctgtttctac
aaccccagctatgacagtgtgaagggtgcaaatgactgggcccagaaaacgttgaaagat
cacgccaaagaccccaggccatacgtctatacccgcgagcagctggagaaagcccagacc
cacgacaagctctggaacgcagcccagtaccagatggtgattgagggtaagatgcatggc
ttcctaaggatgtactgggccaagaagatcctggagtggacctcttcaccagagggagcg
ctctccatcgccatctacctcaacgaccgatacgagttggatgggcaggaccccaacgga
ttcgtaggttgtatgtggtccatatgtggggtccatgaccagggctgggccgagagaccc
atcttcggaaagatacggtacatgaactacaaaggctgcacccgcaagtttgacgtggca
cagtttgagaggaagtactgccccaaagacctgtaa
DBGET
integrated database retrieval system
