Oncorhynchus keta (chum salmon): 118394481
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Entry
118394481 CDS
T09424
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118394481
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118394481
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118394481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
118394481
NCBI-ProteinID:
XP_035643585
LinkDB
All DBs
Position
15:14475482..14498046
Genome browser
AA seq
1643 aa
AA seq
DB search
MLDSEECTLSLDNLFFERPVVHKVKPLCQDQSSWQLEPPPSLSQIPATQDIQKEAEDLSS
FSFSQRSKKFIPPLKRTVGSDGFIQNNTDFNEMTSDGRKEPEGQGGCALWSQEDFMNKSQ
CSTMVSRGRTETPQESGHALEQKHFPLDFSQSPPVRRSLFKPLIGQVLNSGADLNTRHSQ
TRPREQQTFNQVSMATEPRLARQSAAGPSPLSGLGPAAARGPPPHTTDKGTKRANILPMT
PQPLQIQGFSGPGILRPVSEIHAKFRSVFKEFPYFNYVQSKALDDVLYTGKNVVACAPTG
SGKTVLFELAIIRLLMETTEPWRNVKAVYMAPIKALCSQRFEDWKKKFEPLGLSCKELTG
DTEIDDFFEIQDAHIIMTTPEKWDSMTRKWRDNCLLQLVRLFLIDEVHMVKDTTRGATLE
VVVSRMKAVHAFRAAENPQEDVSMRFVAVSATIPNIKDIADWLCDTRGPATCLEMDESHR
PVKLRKVVLGFPCSSNQTEFKFDLSLNYKMANIIQTYSDQKPTLVFCSTRKGVQQSAAVL
AKDARFIMRIEHKQRLMKYANSLLDSKLRDLVTFGVGFHHAGVDVSDRKVIEEAFTMGDL
PVLFTTSTLAMGVNLPAHLVVIKSTMHYIGGACKEYSDADMLQMIGRAGRPQFDTSATAV
IMTKTHTKDKYMQFMNGAEIIESSLHTHLVEHLNAEIVLHTISDVNMALDWIRSTFLYIR
ALKNPKHYGFSTDLDRCGIEAKLQELCLKNLNSLASIGLVSMDEDVNIKATEAGRLMARY
CVAFDTMEQFSKVTGTETLPELIELMAKGREFTDVQLRVNEKRTLNTLNKDKNRITIRYP
MEGKIKNNEMKVNCLIQAQFGSIPIQEFGLTQDTGRIFRNGVRISRCLAEFLNQRSKTGF
SALLNSLILAKCFSAKLWENSPYVSKQLEKIGLTLSAAMVNAGLTTFSKIEKTNARELEL
IINRHPPFGNQIREAIINLPKYEVCLEQLPRYNVATAEIVVTVSVKNHEQLLSKRTAPDH
HYVTMIIGDCDNNVVFLQKLTDLMLLKSGSWSKKIEVAKASKGEEINVNLVSSEYVGLDI
QQKFSPFFSGPKRYGAESLAPEQHNTMQQAQANAQRSQGATQRTQPTAQQTQKRNSTSTC
ATEKDSSQSDPGKRQCNHLCKNKDQCGHDCCKNGGPGVLKRQINQHSSFTSYLQDLKTRS
DTLTETPVKRLKMRMNGGMGAVNMQQFSYSPKPILPASSRYEGNQYGALARPQSVDSAED
FTTPQEMAYVVTYGHEYNDYLEDISQTTGDLKPPPVQLQTLTESQSTSMWRKPNAYDGRS
LSHSNPQSTPQSQSRSYPQSHSTPQSQSRSYPQSHSTRQSRDYPQSHSTPQSQSRGYPQS
HSTPQSRGYSQSISQSQSRCYPQSHCTPQSRSYPQSHSTPQSQCRSYPLSQSTTQTQSRG
NSTPQNQSRSFSQSSIVDLTDDSGFFSSSITPSVTFDLGDEWDDFDDDNLVHANEKPCTT
VAKTKGVDLDCDRPKGNSTPLSSISLLPKPRFTTSNSPLRSISPVVSQIPVTTLPVRPPN
SQATASWRHSDNKTTRTFSEPPMKAPPSFPKQTDTSLPPLGQRFDFFSKTTTPNNDTVTG
KRLQGEDYSKEVEAFMGIFDGLF
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgttggactcagaagagtgtactttgtccctggataacttgttctttgagaggccagtt
gtccacaaagtaaagccactttgtcaagatcagagttcttggcagttggaaccccctcca
tccctctcccagattccagccactcaggacatccaaaaagaggcagaggatctttcatca
ttcagtttctctcagaggtccaagaaattcattccccctttgaaaagaacagtcggcagt
gatggtttcatacaaaataacacagattttaatgaaatgaccagtgatggaagaaaagaa
cctgagggccagggcgggtgtgctctctggtctcaggaagacttcatgaacaagtctcag
tgttccacaatggtcagcagaggtcgaactgaaaccccacaggagtctggtcatgcgctg
gagcagaaacattttcctctggacttcagccaaagcccacctgtacggagaagtttgttc
aaacctctcattggtcaggtgctgaacagtggtgcagacttgaacacccgccacagccag
acaagacccagagagcagcaaaccttcaaccaggtttccatggcgacagagcctcgactg
gcaagacagtcagcagcaggccccagccccctcagtgggctgggtccggctgcagcccgg
ggacccccaccgcatacaacggacaagggcaccaagagggctaacatcctccccatgaca
ccccagccccttcagatacaaggtttttctgggcctgggatactccgaccagtctctgaa
atccatgcaaaattcagatctgtcttcaaagagttcccttacttcaactacgtccaatcc
aaagccctggatgatgttctttacacaggaaagaacgttgtggcttgtgctcctactggt
tctggtaagacagtgctctttgagttggccatcatccgcctactgatggaaaccacagag
ccctggagaaacgtcaaagctgtttatatggcacccatcaaagctctatgcagccagcgc
tttgaggactggaagaagaaattcgagcctctgggcctgagctgcaaggagctgaccgga
gacacagagatcgacgacttctttgagattcaggacgcccatatcatcatgaccacacct
gaaaaatgggacagcatgaccaggaagtggagggataactgcctgctgcagttggtccgg
cttttccttattgacgaggtgcacatggtgaaagacactacgcgtggagcgacactagag
gtggtggtgagcaggatgaaggcggtccatgccttccgtgcagcagagaacccccaggag
gacgtctccatgagatttgtggctgtctccgccaccatccccaatatcaaggatatagca
gactggctgtgtgacaccagaggccctgctacttgtctggagatggatgagagtcacaga
cctgtgaaattgaggaaggtagtgctgggtttcccctgcagcagcaaccagactgagttc
aagttcgacctgtcactcaactacaagatggccaacatcatccagacctactcggaccag
aaaccaacccttgttttttgctcaacaaggaaaggagtccagcagtcagccgctgttctg
gccaaggatgccaggttcatcatgaggattgagcataaacaacggttgatgaagtatgca
aactctctcctggactcaaaactcagagacctggtgacgtttggggttggtttccaccac
gccggggtagacgtgtccgacaggaaggtgattgaagaggccttcaccatgggagacctg
cctgtactgtttacaaccagtactctggcgatgggggtgaacctgccagcccacctggta
gtgatcaagtccaccatgcactacatcgggggagcctgtaaggagtacagcgacgccgac
atgctgcagatgattggccgagcaggccggccacagtttgatacgtcagcaacagcagtg
atcatgaccaagactcacaccaaagacaagtacatgcagttcatgaatggggcagaaatt
attgagagcagtctgcacacccaccttgtagagcacctgaacgctgagatcgtcctccac
accatctcagacgtcaacatggccctggactggatccgctccaccttcctctacatcaga
gcactgaagaaccccaaacactacggtttttccaccgacttggaccgatgtgggatcgaa
gccaaattgcaagagctctgtctgaagaacctgaactccctggcctccattggtctggtc
tccatggatgaggatgtcaacatcaaagctacagaggcaggcaggttgatggccaggtac
tgtgtggcatttgacaccatggagcagttcagcaaggtgactggcactgagaccttacct
gagctgatagaattgatggcgaagggcagagagttcactgacgtgcagctgagagtgaac
gagaagagaaccctgaacacgttgaacaaggacaagaacaggatcaccatcaggtatccc
atggagggaaagatcaaaaacaatgagatgaaggtgaactgcttgattcaggcccagttt
ggctccattccaattcaagagtttggactcacacaagacaccggtagaatcttccggaat
ggagtccgaatcagcagatgtttggcagagtttctaaaccagcgctccaagacaggcttc
tctgctctgctcaactccctgatactggccaagtgcttcagtgccaagctgtgggagaac
tctccttatgtctcaaagcagctggagaaaatagggttgactctttcagccgccatggtg
aacgcagggctcaccaccttcagtaagatagagaagaccaacgccagggaactggagctg
atcatcaacagacatcctccattcggaaaccaaatcagagaggctatcatcaatctaccc
aagtatgaagtttgtttggagcagcttccaagatacaacgtcgccaccgcagagattgtc
gtgactgtgagcgtgaagaaccacgaacagctgctgtcaaagagaactgctcctgaccac
cactatgtcaccatgatcatcggggactgtgacaacaacgtggtcttcctgcaaaaactc
acagacttgatgctgttgaagtcgggaagctggtcaaaaaagattgaagtggcgaaagcc
tccaaaggagaggagatcaatgtgaatctggtcagctcagaatacgtggggttggacatt
caacagaagtttagtcccttcttctctggaccgaagaggtacggagctgaatcactcgca
cctgagcaacataacaccatgcagcaagcacaggctaatgctcagagatcacagggtgca
acacagagaacacagccaacagctcagcaaacacagaagagaaactccacatccacatgt
gccacagaaaaggattcctcacaatcagatccaggcaaaagacaatgtaaccacttatgc
aaaaacaaggatcaatgtggccacgactgctgtaaaaatggagggccgggggttctgaaa
aggcagattaatcagcattcgagtttcacctcctacctccaagacctgaagaccaggagt
gacacactgacggagacaccagtcaaacgcctcaagatgagaatgaatggcgggatggga
gctgtgaacatgcaacagttctcttattcacctaagccaatcctacctgcttcctctagg
tatgaaggtaaccagtatggcgctttagcaagaccacagagtgtagattcagctgaggac
tttacaacaccccaagagatggcttatgttgtgacctatggccatgagtataatgactac
ctggaagacatatctcagacaacgggagatttgaaaccaccacctgttcaacttcagacc
cttacggagtcacaaagcacttcaatgtggaggaagcccaatgcctacgatggaagatcc
ctcagccacagcaacccccaaagcaccccgcaaagccagagcaggagttaccctcagagc
cacagcaccccccagagccagagcaggagttaccctcagagccacagcacccgccagagc
agggattaccctcagagccacagcaccccccagagccagagcaggggttaccctcagagt
cacagcacaccccaaagcaggggttactcccaaagtatctctcagagccagagcagatgt
tacccacagagtcactgcaccccccaaagcaggagttaccctcagagccacagcaccccc
cagagccagtgcaggagttaccctctgagtcaaagcaccacccaaacccagagcaggggt
aacagtaccccccaaaaccagagcaggtctttttctcagagttccattgtagacttgacc
gacgacagtggtttcttctcatcgtcaatcacccccagcgtgacctttgacctgggagac
gagtgggacgattttgacgatgacaacttggtgcacgccaacgagaagccatgcaccact
gttgctaaaactaaaggggtggacctggactgtgataggccaaaaggaaactccacacca
ctatcatccatttccttactgcccaaaccccgcttcactacatccaattccccactcagg
tcgatctccccagttgtttctcagataccagttactactctcccagtcagaccacccaac
tcccaggctactgctagctggagacactctgacaacaagaccacaaggacattcagtgaa
ccccccatgaaagcaccaccctccttcccaaaacagactgacactagcttgccccccctg
ggacaacggtttgatttcttctcaaagacgactaccccaaacaatgacactgtgactggc
aaaaggctccagggagaggattacagcaaggaagtggaggcattcatggggatatttgat
ggactattttag
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integrated database retrieval system
