Oncorhynchus keta (chum salmon): 118394511
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Entry
118394511 CDS
T09424
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03010
Ribosome
oke04120
Ubiquitin mediated proteolysis
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
118394511
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118394511
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118394511
04137 Mitophagy - animal
118394511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oke03011
]
118394511
04121 Ubiquitin system [BR:
oke04121
]
118394511
Ribosome [BR:
oke03011
]
Ribosomal proteins
Eukaryotes
Large subunit
118394511
Archaea
118394511
Ubiquitin system [BR:
oke04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
118394511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
118394511
NCBI-ProteinID:
XP_035643635
LinkDB
All DBs
Position
15:complement(16063065..16069317)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacgttgacgggtaaaaccatcactcttgaggtggaacccagt
gacaccatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcctgaccaa
cagcgactcatcttcgctggcaaacagttggaggatggccgcacattgtcagattacaac
attcagaaagagtccactctacatctcgtgctgcgtctgagaggaggtatcatcgagcct
tccctgagacagctggcacagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgtgcagtcaactgccgcaaaaagaagtgtgggcataccagcaac
ctgcgccccaagaagaagctgaagtaa
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