Oncorhynchus keta (chum salmon): 118394554
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Entry
118394554 CDS
T09424
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118394554
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118394554
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
118394554
NCBI-ProteinID:
XP_035643725
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All DBs
Position
15:complement(17981672..17991314)
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AA seq
547 aa
AA seq
DB search
MESIVSDVAVGMKRGSDDLSLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVMPQVRNVPVF
IQFSNHKELKTDSTLNQRAQAVLQAVSAVQDGGSPNSDNSTLDSVLAHAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPAMAAAYNKDSSLLGTPSGM
GAHYSNGGGFQSSLSLSQGGGAINPMSAAAAAAAAAGRMVLSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMHGKIIRVTL
SKHQAVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSTTLHLSNVPFGLDRE
DVTEEDLRLLFSNAGGIVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKV
SFSKSTI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcattgtcagtgatgttgcagttggcatgaagagaggctcagatgatttgagt
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtggaggacaggatggagagtcccccttcccgcgtgctccacatcaggaagttgccc
agcgaggtgtcagagacagaggtcatcgctctgggcctaccgttcggcaaggtcaccaac
atcctcatgctgaaaggaaaaaatcaggcgttcctggagttgggtacggaggaggcggct
gttaccatggtgaactactacacggcggtgatgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctgaagacagacagcactctcaaccagcgtgcacag
gctgtcctccaggccgtgtcggcagtgcaggatggtggctctcccaactctgacaacagt
acgctggacagtgttctagctcatgcccccagccctgtgctcaggataatcatcgacaac
atgttctaccccgtcactctggacgttctacagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaaccagttccaggccctgctccagttcagtgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaattcctgc
tgcacgctgcggatcgacttctccaagctggtcaacctgaacgtcaagtacaacaatgac
aagagccgggactacacccggcccgagctccctgccggtgacggccagcctgcactagac
cctgccatggccgccgcctataacaaggactcctccctgctcggtaccccctctggaatg
ggagcgcactactctaatggtggagggtttcagtcttctctctccctctcgcagggcgga
ggagccatcaatccaatgagtgctgcggcggcagcggcggcggctgcagggaggatggtg
ctctccggacactctggctgcagcggcgtgctcctggtcagcaacctgaacgaggagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctcttatccagatgtcagacgggaaccaggcccag
ctcgcgatgagccacctgaatggccagaagatgcacgggaagatcatccgtgtgacgctt
tccaagcaccaggcagtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccggttcaagaagcccggctccaagaactttcagaac
atcttccctccttccaccacgctccacctctccaacgtccctttcggacttgacagggag
gatgtgacagaggaggatctgcgactgctgttctctaatgctgggggcattgtgaaggcc
ttcaagtttttccaaggccacaaaatggcgcttctccagatgtccacggtggaggaggcc
atccaggccttaatggacctccacaactacgacatgggcagcaaccaccacctgaaggtc
tccttctccaagtcaaccatctag
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