Oncorhynchus keta (chum salmon): 118394560
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Entry
118394560 CDS
T09424
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X2
KO
K19192
histone deacetylase complex subunit SAP130
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118394560
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118394560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
118394560
NCBI-ProteinID:
XP_035643743
LinkDB
All DBs
Position
15:18168370..18187232
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AA seq
1027 aa
AA seq
DB search
MSSQQYSRPGIPPGMGKKQIPGGNTAMVASSQPNTTGGTDDSSRDPHPDHSPYDRPSGGG
GAPGFRDDKQETVVVRPYAQVHGPSQGHHPTLPQHLPLQQGMPVTVSAPPPHIPQGLPLA
FTEGPIKVQSSLKSPMPSRVIAPAPANIQGHISLPPKVPSHLTVTMESTVPPTPGIPVAT
ISGQQGNPSNLHHHVQIIRSNGPPLQLGSTGIPQHTFTSHLPRGAAAAAVMSSSKGPTVL
RPATGPGSGTGPPTVQHIIHQPIQSRPIVTTSTAVLPTVVAPVTATRPQSPVVSSATHSA
EMVHGRPGLTVHPPPATLSIQRPPQSRETPTRITLPSHPAIGGQKPQLYNTMAQKPIFSN
VTPVAAATVAPILATNTAPSPSTTGSGPHPNSNIVTMAMPSHSSHATAVTTSNIPVAKVV
PQPIAHTSPRIQPEYPGERGNLIPISGPRSSPNPITMEARSDRQPVPVQFQYFLPTYPSS
SYPLTHTYTPITSSVSTIRQYPVTPQAPSGTAMQTQASVGVASAVHLNPMQLMTVDRIAQ
INTQNIQPAAMATQGIKSTNISTQGLHTATGQITAQNILPVPINQQQPAIENKTSVVLAD
GSTLVANPIGQTFGSSQPPTCVGQTHPQNTGPGAPTLLSSPRPSILRKKPANEGSAVRKN
LIPEATSPRIDGGIRPASGMKHKADLHVSLASPLTSSSMEALPIHQINEQQPSQPIQTLL
SVSAPPHSQPGPAMSAITPPISSMANVVVPPTQAAANSTAACGISSTLPELKIKQEVDPM
DTSKAGPPMPHCGAPMLSMMPGGDVILGASPRKKPRKQQHVISTEESEMMETNSTDEEKV
LARPHSMRPEKRKSPPKEYIDEEGVRYVPTRARPPVTLLRHYRNPWKAAYHHFQRYSDIR
VKEEKKGTLQDVANQKGVVCRAQGWKMHLCAAQLMQLTNLEHDVYSRLTTLQEGLIPKKK
AGSDDDMHRINELIQGNMQRCKLVMDQITEARDAMMKVLDHKEKVMKLINKNGGVKKVNK
LKRKDKA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcaacaatattcacgaccgggaataccccctggtatgggaaaaaaacagatt
cccggaggaaacactgcaatggtggctagtagtcaaccaaacacgacaggtgggacagac
gatagcagccgtgaccctcacccagaccacagtccttatgaccgccccagtggtggtggt
ggagcaccggggttcagagatgacaagcaggagacagtggtggtccggccttacgcccag
gtccacggcccctcccagggtcaccacccaacactacctcagcacctgcccctccagcag
ggcatgcccgtcacagtgtcagctcctccaccgcacattccccagggcctgcctctggcc
ttcactgaaggacctataaaggtgcagtcatctctgaagtcgcccatgcccagtcgagtg
attgccccagcaccagccaacatccagggccacatctccctgccacccaaggtgccaagc
cacctcactgtaaccatggagagcactgtgcctccgacccccggcatccctgtagcaact
atcagtggccaacagggcaaccccagtaacctgcaccatcacgtgcagatcattcgcagc
aacggcccgcccctgcagctcggctccactggcattccccagcacacctttacctcccat
ctaccccgaggagctgctgcagctgctgtgatgtccagttccaaaggaccaaccgtactg
agacctgctacaggccctggtagtggtactggcccacctactgtccagcacatcatccac
cagcctatccagtcccggccaatagtaacaacgtccacggctgtgttgcccacggtggtt
gccccggtaacggccaccaggcctcagtccccagtggttagctcagccacgcactccgcc
gagatggttcatgggcgtccagggctgaccgttcacccccctccagccactctgagcatc
cagcgtcctccccaatctcgggagacccccacacgcatcaccctgccctctcaccctgcc
attgggggtcagaaaccccagttgtacaacaccatggcacagaagcccatattcagcaat
gttactcctgttgctgcagcaactgttgcccccatattagccaccaatactgctccatcg
cctagtacaacaggctcaggaccccaccccaacagtaacatcgtcaccatggcgatgccc
tctcattcctcccacgccacagcagtcaccacgtccaacatccccgtggctaaagtggtt
ccccagccaatagcccacacctcgcccaggatccaaccggagtaccctggagagaggggc
aacctgatccccatctcaggcccccgctcctcccccaaccccatcaccatggaggcccgc
agtgacaggcaaccggtgccagtgcagtttcagtacttcctgcctacctacccttcttcg
tcgtaccctctgacacacacctacacccccatcaccagctctgtttcaaccatccgacag
tacccagtaacccctcaggcccccagcggcacggccatgcagactcaggccagtgtgggc
gtagcgtcggcggtgcacctcaaccccatgcagctgatgacggtggaccgcatcgctcag
atcaacacgcagaacatccagcccgccgccatggccacgcagggcatcaagtcaaccaac
atcagcacccagggcctgcacactgccaccggtcagatcactgcgcaaaacattctacct
gttcccatcaaccaacagcagccagccattgagaacaagacctcagttgtgttagcagac
ggctccactctggtagccaaccccattggccagacgttcggcagcagccagcctcccacc
tgcgttgggcagacacacccccagaacactgggcctggtgcccccaccctgctgtcctcc
ccccggcctagcatcctgcgcaagaagcctgccaatgaagggtctgctgtgaggaagaac
ctgatcccagaggccaccagccccaggatagatggaggcatcaggcctgcatcaggtatg
aagcacaaggctgatctccacgtgtccctggcttccccgttgacgtcgtcctccatggaa
gcgctgcccatccatcagatcaatgagcagcagccctctcagccaatccagaccctcctt
tcagtgtctgcaccccctcactcccagcctggccccgccatgtccgccattactccacca
atctcgtctatggccaacgtggtggttccgcctacacaggcagcggccaatagcacagcg
gcatgtggaataagctccaccctccctgagctcaagataaagcaggaagtggatcctatg
gatacctccaaagcaggtccccctatgccccattgcggtgcccccatgttgtccatgatg
cctggtggggacgtgatcctcggggcctcacccaggaagaagccccggaagcagcagcat
gtcatctccacggaggagagcgagatgatggagaccaacagcacagacgaggagaaggtc
ctggccagaccacacagcatgaggcccgagaaacgcaagtcgccccccaaggagtacata
gatgaggagggtgttcgttatgtccccacccgtgctcgccccccggtcaccctcctccgc
cactacaggaacccctggaaggctgcctaccaccacttccagagatacagtgacattcgg
gtcaaagaggagaagaagggcaccctgcaggatgtagccaatcagaagggggtggtgtgc
agagcacagggctggaagatgcacctgtgtgctgcacagctcatgcagctgactaatctg
gagcatgacgtgtacagccgcctcactaccctccaagagggcctgatcccaaagaagaag
gccgggtcggatgatgacatgcaccgtatcaacgagctcatacagggtaacatgcagcgc
tgtaagctggtgatggaccagatcactgaagctagagatgccatgatgaaggtgctggac
cacaaggagaaagtcatgaagttaatcaacaagaacggcggagtgaagaaagtcaacaag
ctgaagcgcaaggacaaggcctag
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