Oncorhynchus keta (chum salmon): 118394614
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Entry
118394614 CDS
T09424
Name
(RefSeq) deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118394614
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118394614
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118394614
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C64
118394614
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118394614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
118394614
NCBI-ProteinID:
XP_035643893
LinkDB
All DBs
Position
15:23246095..23253399
Genome browser
AA seq
1190 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEHEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNKECIIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKLNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIRKYIN
LEQDGSCVIAGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGMIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPEKDILIPDYKLSTLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEVTLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVEIQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQEQKGVQGHGRP
SSPSATQEPSSSAPATPTKSSFSPTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIA
NEFIVSPAQQCIRHGFPPKELLPPKDGEENEPVALQHGDRVTVEILRGPEDHKVSTPSAS
SSHSSLHSLHSVKSDDTVTSSRMNTSRELQENIDLEMSSLCLLATLMGEDVWSYAKKLPH
LFQQGGVFFNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEECLELCVDAAGHFSVGPDVE
DLVKEALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPG
GSPPEHKPITRQHSSGVDLSASVSKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSM
IEEQRKKLQEMVSSIQASMDRHLREQSNAGAGTGGPVERTSGAKMSASQSTPGVGEQEAS
SMDVSTAGAHGTPVKAGNKPDGKDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctcaaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggctcgatcagcattgaatgc
actgaatgtggccaacgccacgaacagaataatcttttaaacgtggaagaagtaactgat
ccagacgttgtactgcacaatttgttaagaaatgccctactcggtgtcactggagcccca
aagaagggaaccgagctggtgaaagtgatgggactttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgagg
gaaatgaatcaaggagagatgttcgactgctcacttctaggtgatcgggcgtttctaatc
gaacatgagcatgtatctacagttggctatggcaaggacagatccgggagcctgatatac
ctccacgacactttggaggagattaagaaagctaacagcaacaaagaatgcataatacct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttaagagagaatttgaaacagaatttcaagctaaatctg
gatcgctacaaggcactctttcaggattttattgatgcagctgaatgggaagacatcatc
aacgaatgtgaccccctttttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatatttggcttggctaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctctggggattactctgcaacttttctccccgggcttgtaccggaagag
cagtgcaagggaaaagatgggaagttcaacaagcctatatgtatcgcctggagtagctct
gggcgtaaccactacatcccgcttgtcggaataaaaaacaccctcctccccaagctgccg
cccaggcttctccccaaagcttggggggtcccacaggagctcatcaggaagtacattaat
ttggaacaagacgggagctgcgtcatcgcgggagaccggagcttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggaatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtatgatcggcgtccaaccc
gaagaggtgactgaggctgccaggaaatcagtcatggaaaaccggcttcatcgctgtctg
atctgcaatgcactctctgagcttcatgttctacctgagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccatgggcagctcagacccgacaagaactacagcttt
ccgttgaacaatgtggtctgctcttacgacccagagaaagacatcctcattcctgactac
aaactaagcaccttgaacacctgcaactggtgccacggcacctcagtgcgccacatccat
ggcaacggctctgtggtgtacttagatggagacagaaccaacacccgctcccagggggga
aagtgcggctgcggcttcaagcactactgggagggaaaggagtatgacaatctgccagag
gctttccccatcactctggagtggggtgggcgtgtcgtgcgggagacagtgtactggttc
cagtatgaagttgaggtgaccctgaacagcaacgtctatgatgttgccatgaaactggtt
accaagcatttccctggggagtttgggagtgagctcctagtgcagaaagtggtgaacacc
attttgcatcacactgccaagaagaacccagatgagtataacccagtctctattgacggt
gcgcatgctcagagactcacagacgtggtggaaatccaacaggccgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagctgacc
atgagtaaagcagagcggagccttcagcagagcatcagcgaacaggccctagtgacccag
aaaaggaggacagatcgactgaagcaggagcagaagggagtccagggacatgggcggccg
tcctctccgagtgctactcaggaaccttcctcatccgctccagccacgcccaccaaatct
tccttttctcccacttccagtaaggagaagaagatccgtgtcaccactagcgacgggcgg
caggccatgctcactctacaggctcaaaccaccttttctgagctccagaggagcattgcg
aacgagttcattgtgtctccagcccagcaatgtattcgacatgggtttccccccaaagaa
cttttacctcccaaggatggagaggagaatgagcctgtggctctccaacatggggacagg
gtgactgtggagatcctgagaggtccagaggatcacaaggtttccaccccaagtgcttcc
agttcccattcatccctgcattcactccactctgtgaagagtgatgatacagtgacttcc
agcagaatgaatactagcagagagctgcaggagaacattgaccttgagatgtcctccctc
tgtctcctagcaaccttaatgggagaagatgtctggtcatatgcaaaaaaactgcctcac
ttattccagcaaggtggagttttcttcaacattgtgaagaaagatatgggcctgatggat
ggcaagcactgcaccctcccacacttgactggaaagacgtttgtgtacaacgcagcagag
gagtgtctggagctgtgtgtggatgcagcgggacacttctccgtgggccctgacgtggag
gacctcgtcaaggaggccctggtgcagctccgctctgaagctgcctccaggagtcgggag
ggaagcccctctcacagcctgctgaggctcggaagtggaggtgtggtgcgcaagaaggag
cagctccagagtgtcaacgccttccaaggtaagggccactccctgggcagcgccccaggc
ggctctccccctgaacacaagcccatcacccgccagcacagcagcggggtggacctgagc
gccagcgtctcaaagggacctgacctctctgacatctcagaagatgcaaccaaggagctg
gtgcgcatggctcctggtttcgtcaccatgaaagacagccgacacctagaccctagtatg
atcgaagaacagaggaaaaaactacaggagatggtctcatccatccaagcctccatggac
aggcacctgagggagcagagcaatgcaggggcaggcactgggggccctgtagagaggaca
agtggggctaagatgagtgcttcccaatctaccccaggggtaggtgaacaggaagcctct
tctatggacgtatctactgctggtgctcatggcacaccagtgaaggcagggaacaagcct
gatggaaaggatgcagggtcagaggagctggaggaaatggatagccaggatgcagagcat
accaacgccctggagccgatggatcattcctga
DBGET
integrated database retrieval system
