Oncorhynchus keta (chum salmon): 118394622
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Entry
118394622 CDS
T09424
Name
(RefSeq) cell adhesion molecule DSCAM-like isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118394622
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
DSCAM family
118394622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
118394622
NCBI-ProteinID:
XP_052375504
LinkDB
All DBs
Position
1:complement(25630425..25766991)
Genome browser
AA seq
2066 aa
AA seq
DB search
MWILAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFRQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLMVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNNV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDSHHHPGHYETHEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLNVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPASLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTIKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPSVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIELHPSSTYNIR
IFAKNNIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWRAPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGESSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKSA
AATSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPTVMSEFEASPDVYFYRVPNLARNRKYS
IWVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMKDIILPCKAVGDPPPTIK
WLKGNNGTPAPVLIDGRRSVHSNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQV
PPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRL
ENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIG
WNNGGCPITSFTLEYRPVDTAMWTMAQRTSLTKSYILYDLAEATWYELQMKVVNSAGFAE
KKITFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKR
RRREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQAMRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PAASRNRYASQWTLNPPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSPSQDTGTGL
TLCLTYNISLQQRGDHYYCTWKGQSAHDRARSSMVSTESASSTYEELARAYEHAKMEEHL
RHAKFTITECFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNM
AAPKAHRPGGELVHLPPYLRMDFLLNRGSASGGRGSNGGNGGREGGGGETGALGQACLEP
QKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLPQREPTGREATGDLAQAPAAKLSS
SQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccacccgcctcgctgcgctggtacctg
gccaccggagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctaatccatgacaatacctac
tattgcacagctgaaaatccttcagggaaaataagaagccaagatgtccacattaaggcc
gtatttcgggaaccctacacggtccgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggacgttcagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagtgcccggctttttgtgtcagatccc
accaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtggaactgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccgccagagtgtcacgggcttgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaggtgtggaacagctatggc
aacgctgaggtggtgggccggcttatggtcaagcagcccctgaaggcggtggtcagccca
cgaaaggtgaagggcagcgtgggtagtaaggtgtccttgcattgcagtgtcagtggctct
gatgagtatgagctgtcgtggtatcgtaacggagagatcatctaccctggcaacaacgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgatggc
ggggcctaccaatgtttcgccaggaagaacaaaatgtctgctcaggattttgttcaggtc
attttggaggacggcactccgaagattctgtcctccttcagtgagaaggtggtcaacccc
aacgagccggtcttcttggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacagtcaccaccaccctggccactacgagacc
cacgagggccacgtggtcagccagctgaacatcacccacaccaaggaggtggacggaggg
gtgtaccgctgcacctgcaggaactcggccggggcggtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacagccatcgcagggcgggac
gcgtacgtccactgtcgcgtcattggctacccatactattccatcaagtggtataagaac
tcccacctgctcccctttaaccaccggcagcgggccttcgagaacaacggcactctgaag
ctgtccaacgtgcaggagttggaccagggagagtacaactgcagggtattggtcaaacct
catcaagagaccaatcagagcgtccatctcaatgtcaaagttccaccgtacatccagccc
tttgcattccagcggttctccattggtcaacgcgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacgtggcagaaggacgggcggccaatccctgccagtctg
ggggttaccatcgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgaccctcaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactcgaaaggtaacggggttccccagttccagcctatcgccctgaactct
ggctcccgtatccaactgctggtcaacggctctctgctcatcaaacacgtgctggaggag
gacagcggctactacctgtgtaaggtcagcaatgacgtgggagctgacgtcagcaaatcc
atgtacctcaccatcaaaattccggccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaagagatgagctgcacggcccatggagagaagcccatcatggtg
cgctgggaaaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccagtgttcgggaagat
tctgggttcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccggaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggctttgacggaaacagccccatcacaggatatgac
attgagtgcaagaacaagtcagcctcgtggaattcagcccagataaccaaagatgtgtcc
ccccagctgaaccaggccaccattatagagctgcacccctcctccacctacaacatccgc
atattcgccaagaacaacatcggcaagagcgacaccagcaacgagctcaccatcaccact
gacgaagcagcccctgatggccctccacaggaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggagggccccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggagagcagcgagagcatcaccctggacaacctgaggaagttcact
gagtatggggtggtggtgcaggcagctaaccgtgctggcaccggcccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaaatccccagaagtaatctctctgtcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaacctgccagacggagagttggga
gagatcaggaacgtgaccacctcctacccgtctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtccgaagtgag
cagatcttcacccggaccaaggaagacgtccctgggcctccagcgggggttaagagtgca
gccgccaccagctctgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
atcaggaagtacattgtcttctgttccaacctgcaccccacggtgatgagtgagtttgag
gcttctcctgatgtgtatttctacagagtgccaaacctggcccgcaacaggaagtacagc
atctgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtg
gaacctcgggccaaagctcctgccaggatcctgacgttcaacggaacagtgactacaccc
tggatgaaggacatcattctgccctgcaaggcggtcggagatccaccccccactatcaag
tggctgaagggaaacaatggtacacctgcccctgttctgattgatggacgccgcagtgtc
catagcaatggtagcttcatcatccgaacggtgaaagcagaggactctgggaactacagc
tgtgtggccagcaacaactggggctctgatgagatcacgctcaacctgcaggttcaagtt
cctccagaccaaccacgcctcacagttaccaagacaaccaccacatcaatcactctgtcc
tggatacctggggacaacggaggaagctccatcagaggctacatcctgcagtactcagag
gacaacagtgagcagtggggcagctttcccatcagccctagcgagcgctcgtaccgtctg
gagaacctgaagtgtggcacttggtacaagttcaccctgactgctcagaatggagtgggc
cccggacgcatcagtgagatcattgaagcaaaaacgcacggaaaagagccccagtttgcc
aaagaacacgagctgtttgccagcatcaattccacccgggtcaggctcaatctaattggg
tggaacaatggcggctgcccaatcacctcattcaccctggagtaccgtccggtcgacacg
gcaatgtggaccatggcccagcgcacctcactaaccaagagctacatcctgtacgacctg
gcggaagccacctggtacgagctgcagatgaaggtggtcaacagcgctggcttcgccgag
aagaaaatcacattcgccacgctcaacgccgatggaagtactatccctcctctgttgaaa
acagtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgacc
atcacctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagagg
aggaggagggagcagaggctcaagagactacgcgatgcaaaaagcctggcagaaatgctg
atgagtaaaaacacacggacaccagacacatcgaacaagcagcaagccatgagaatgcac
atcgacatcccccgagcccagctgctcatcgaagagagagatactatggagactatcgac
gacaggtcgacggtgctgctgactgataatgactttggggagacgtccaaacagaagtcg
tccactgtcacgcacacagtccactaccagtccctgtcgcaggccaccggcccactggtg
gacgtctccgatgcccggcctggaaccaaccccacagcacgccgcactgccaaagcaggc
cctgcagccagcaggaaccgatacgccagccagtggaccctgaaccccccccaaccaccc
acctcctcccacaccctgagcacagactggagactgcccacaccgcgcgccgccggctct
gtggacaaggagagcgatagctacagcgtcagcccatcgcaggacacaggtactggactg
accctatgtctcacatacaacattagtctgcagcaaaggggagaccactactactgtacg
tggaagggtcagagtgctcacgaccgcgcgcggagcagcatggtgtcgacggagagcgcg
tcgtccacgtacgaggagctggcccgggcctacgagcacgccaagatggaggagcacctg
cggcacgccaagttcaccatcacagaatgcttcatctccgacacctcctcagagcaaatg
actgccggcaccaatgactacacagacagcctgacgtccagcacgccatccgagtcaggc
atctgcaggttcaccgcctccccgcccaagcctcaggacgtcagccgggttatgaacatg
gcagcacccaaggcccacagaccgggaggagagctggtgcacctgcccccgtacctacga
atggacttcctgttaaaccgtggctctgcatcgggaggccgggggtccaatggtggtaac
ggaggaagagaaggaggaggaggggagacaggggcgttgggtcaggcgtgtttggagccc
cagaagagccgcacactgaaacggcccccgctcctggaacccacacccatggaggtgccc
acatccagggaggtgcagcagtggcagccagggactgcctccaccctgccccagcgtgag
cccactggccgtgaggccaccggagacctggcccaggcaccggctgccaagctcagcagc
tcacaggagtccctgctagactccagaggacacttaaaacagagcaacaacccctacgca
aagtcctacacactggtataa
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