Oncorhynchus keta (chum salmon): 118394631
Help
Entry
118394631 CDS
T09424
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke04068
FoxO signaling pathway
oke04110
Cell cycle
oke04115
p53 signaling pathway
oke04210
Apoptosis
oke04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118394631 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118394631 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118394631 (atm)
04210 Apoptosis
118394631 (atm)
04115 p53 signaling pathway
118394631 (atm)
04218 Cellular senescence
118394631 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118394631 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118394631 (atm)
03036 Chromosome and associated proteins [BR:
oke03036
]
118394631 (atm)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118394631 (atm)
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118394631 (atm)
Protein kinases [BR:
oke01001
]
Serine/threonine kinases: Other
PIKK family [OT]
118394631 (atm)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118394631 (atm)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
118394631 (atm)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
Check point factors
Other check point factors
118394631 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
118394631
NCBI-ProteinID:
XP_052375517
LinkDB
All DBs
Position
1:complement(25814664..25867077)
Genome browser
AA seq
3089 aa
AA seq
DB search
MSLVLHELLVCCRGLENDKATERKKEADRFRQLIRSPDTVKELDHISGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEVLRSSFSCLAYGEDYSSILLKNILSVRKYWCDITQQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTAVQGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLVSALN
VFLRSAAMNCRMRVCRLGEELLPSVLYVWTQMRPSTTLKEEIVEFFNLQLCVHHPKGSKT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNFQMLEVTQAHLRATQRGSPHGTPSKRRRIDLGWEVLRDHLQPHHNDFDVIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATHPERA
QSYRAELGRLWGRVWALALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCPVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMNEQSEEAEES
SRPHPIICRDFPHNLIPRILVPLTLKDTRAGIIFLLGAKGLESAVMQEQAQVEVKGFLSE
IESMYLQFSFDEMPSNPMVKVVVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQ
TTPPECLVRCSSLLTGVLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMA
EDGTMTTLRSVMRLCTQCVNRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCR
RGSVGIEEEITDEDWDMTRTQADQQEDIDLFDDGDGPQTSTSTGTHRQNVDPNDTQCGFD
AKSLLAEEHLAQQDLAILASLEFLSLCVSAEFIHGLSFKPVEVRRRLLLLLEQIDCTKPL
HLNMYLVLLKKLPAEDTSLAAEEFDSLLRPLADLCSLYRQDQEVCAAVLLGLLPSIRSLG
RTQDQHNDMRHVQGALLQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLT
LREEKLPVSVILPSHLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFEN
VYLKAQEGMRLQKNSSPEDLSDETFNRKATLLKSVSVVLCCSPVCEKQSLFALFQSYKEN
NIEEPLIKKVLGSVSRALGYRSVEGFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHVTLK
DFYSSSYQVLIPHLVFLDDFKQVKSISTLLGKDWKKLLANCFPKIMVNILPYFAMSGQDA
QVARQREKAHRVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDL
RRFIGELDPAPNPPYFSSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQK
AAETINAYERHRILMMYHLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDE
VSSRSFSLCCDLLTSVCRTAVEFCDDAVESHLQVIVGTLTAQVTTQLAISQQVLSLLKFL
VVESQDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSTGKFTLRQEIAHFLSVASCDSLP
LTRLEGLKDLRRQLHNNKSQIRPLLRECLADPAESVLVLLVLNLLQLCKLAANHPGGRDI
LEAAGSCLGELGPVDFSTIALLHGKDQLNARAVSLFPSVEPQWLYITLNCINNALTHHCI
EVRQAAVQSLKDILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVGMSEEVSLVARG
RLESQDLWVPEAGGHKAWLKMLCIVLLDSGGVRSETLLLSRPLCLVKTDFCQRVLPLIIH
DILLGDSDGSWRKLLSTHIQDFFTSCVSRARASSRSTTPLPSDSAGESDISNQGPLDKAS
LRTMLSVINYLRQQQRPLGSDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSE
IYVDKIKTNMEENRRNPARTSRRITFDESSQNFTISSLTEESVKDTGISLQDLLIEVYRS
IGEPDSLYGCEGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNI
GLSSILATYLRGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCS
LQALRDKEFSTFDQTLKYARGNEVEELCKGSLEAVSSLYPALRNLQRISELESIRQLFSK
PLTDVGLAEVCSHWQQHSQLLVDSDFTLVEPILALRSVAQETLISQERNPEKNKYLSTVL
TSHLMELCQLARAAGNTQLAERAVFQMKQHGGGGGRGSTASSWQLEEAQVFWAKGEQGLA
LGLLRQMIHTLEEQVNVNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVVVIE
GHAIGSDTKLQSQRTQAFLSLARFSDAQYQGIDNYMKSSEFENKQALLEKAKEEVDLMRE
RKVSTNRYTVKVQRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLAS
LWLENADVKTVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSSTVAEDVGFYGVLNELI
CLSCLEHPHHTLFIILALVNANKDESFSRSRLSKSTPRHSSQLDLERSEVAQGIMKKIRK
KRAQMIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKV
DPSGKYDNLVTIKSFKPHFHLAGGVNLPKIIDCVGSDGKIRRQLVKGQDDLRQDAVMQQV
FHMCSMLLQRNTETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGDFLIDPQKGAHTRF
CPQDWTSITCRKKMMESQRLGSGGKTQAFSEVCQNFRPVFRYFCMERFLDPAVWLEKRLA
YTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLS
RDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFYLQ
QQHDEQAELQSTLNSTLGGDILEAHRKSSSDSQSFNKVAERVLLRLQEKLKGVEDGRVLS
VGGQVNLLIQQAMDPNNLSRLFPGWQAWV
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtccttcacgagctgcttgtctgctgcagaggtttagagaatgacaaagca
acggagagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
aaggagctggatcacatttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttctgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggccaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggcgagctcctgaatcatgtgatggaggtgctgcggagctcattcagctgcttggcctat
ggggaggactacagcagcatcctgctcaagaacatcctgtctgtccgcaagtactggtgt
gacatcacccagcagcagtggcacaatttgctggatctgtattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgcagtccagggc
tgctgtctgcagactgagggcttcagccatacactcttcagcttcttctccagagcactg
ctcaatgccaggcaggagagacacttggcagtggtggagcacttggtctctgctctgaac
gtcttcctgaggtctgctgccatgaactgccgtatgagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatagtagagttcttcaacctgcagctctgtgtacatcatcccaaaggatcaaagaca
caagacacaggagcctacgctgaggactgggtcaaatggcagagtctactttataacctg
tatgatgccctggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccacatcgctgtgaaggagaaccttatggagctgactgcagaaatttgccatcag
ctctttagcgaggattgtaacttccagatgctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaagcgtagacgcattgacttgggctgg
gaggttctccgagaccacctgcagccacaccataatgactttgacgtcataccatggtta
cagatcacatcagtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctatctgtcctttgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacacacccagagagggcc
caatcctacagggctgaactgggcaggctgtggggccgtgtctgggccctggctctaagg
ggggtcagctccccccagactgaggccctcagtctggccctgctgtccaccatcctccag
ggagccttcattcccattgacagagagctttggaagctcttctctggctcggcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggccctcctcaagtgtcctgttcttaag
agcctgggcactgggtgggaccatgcaggggccgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaatgaacagagtgaagaggcagaggagagc
tcaagaccacaccccatcatctgcagggattttcctcataacctcatccccagaattctt
gtgcctttgaccctcaaagacacccgagctggcattatttttctccttggagcaaaggga
cttgagagtgctgtgatgcaagagcaagcacaagtggaagttaaaggtttcctgagtgag
attgagagcatgtacctgcagttcagctttgacgagatgccctctaaccccatggtgaaa
gtggtggtgtcctcagccggcacccagctcactgttgtccccagccttaaacacaagctg
gagcagggcctcttgtctgtggctgaccacctactcaactgctactccccagattctcag
accacaccaccagaatgcctggttcgttgttcaagtctccttactggcgttttagcagga
tatgtctctactggtctcctgactgaggaagaagcctgccattcccaactcttcctaaag
gccaaggcactggtccaggattttagtgagtacatatctaatgtgaaggtgaagatggca
gaggatgggacaatgaccacactcaggtctgtcatgcggctgtgcacacagtgtgtcaac
agaggggttaaggacagtatgagttctgtctcttgcaacttgttcatgaagattttccct
gcgagacttttgactgaactggcagaaatatgcaaactgttgctgaacagctcctgtagg
agaggtagtgtggggattgaggaggagatcacagatgaggactgggacatgacgaggaca
caggctgaccagcaggaggatattgacctgtttgatgatggagacggaccacagaccagc
acatctacggggactcacagacagaatgtggaccccaatgacacccagtgtggttttgat
gctaaaagcctactggctgaggagcatttggcccagcaggatttagccatcttggccagt
ctagagttcctgtccctgtgtgtatcggctgagtttatccacgggctctctttcaaacca
gtggaggttcgccgcaggttactactgctgctggagcagatagactgcaccaagccacta
cacctcaacatgtacctggtccttctgaagaaactacctgctgaggacacatcgctggca
gctgaagagtttgactcactcctcagacctctggcggatctttgctcattgtaccgccag
gaccaggaggtctgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggc
cgtacccaggaccagcacaatgatatgagacacgtccagggagctctgctccaagtggtc
tctggattctgcattttgggcagaacggggaaatgcacagcaattgtaaaggtggcatta
attcactgtctactggctctactggaggctgacccttgctgtaagtgggcggtccttacc
ctgagggaggagaagcttccagtgtccgtcatcctcccgtcccacctgtctgactctcac
catcatgtacgaatgcttgcagccatgacagtggaaaggctgtttttggagatgacaccg
gacagcttggagaagagaaagatgcttcctctgaaatgccagcagacagcctttgagaat
gtctacctgaaagcccaagaagggatgaggctccagaagaacagctctcctgaagacctg
agtgacgagacctttaaccgcaaggccacgctgctgaagagtgtgtcggtggtgctgtgc
tgcagccccgtctgtgagaaacagtccctcttcgccctcttccagtcctacaaggagaac
aacatagaggagccactcatcaaaaaggtcctgggcagtgtgtccagagctctgggctac
aggagtgtggaggggtttgtcagctctcacctggattacctggtggcagagtggctgggc
cagcatggctacactctggaatccttcccttacactctgctcaaccacgtcactctcaag
gacttctacagctcctcctatcaggtccttatcccacacctggtcttcctggatgacttt
aagcaggtgaagtccatcagcaccctcctgggtaaggactggaagaagctgctggccaac
tgcttccctaagatcatggttaacattctgccctactttgccatgtcgggccaggatgcc
caagtggcccggcagagagagaaggcccacagggtctatgacctactcaaggacagcaac
tgcctgggcaaaccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtg
gagctgttgatgaccctgtatgaaggggctgctactgaggaggggggcagaggggacctg
agaaggttcataggggaactggacccagccccaaacccaccctatttcagctcctatgtc
ataaaagccacactggactatctcagctcgtgtcacagtgccaatctcaagtctctggtg
gccattttatccaagactccgatctccatccagaggatcctactggcggtgtgtcagaag
gcagctgagacgatcaatgcctacgagaggcaccgcatcctgatgatgtaccacctgttt
gtcagcctgctgctcaaggaggtcaaggacggcctggggggagcctgggccttcgtcctc
cgagacataatttacacactcatccaccacatcaacagcaggccggcccagttggacgag
gtgtccagccgtagtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggct
gtggaattctgtgacgatgctgtggagagccacctacaggttatcgttggtactctcact
gcccaggtgacaacccaacttgctatctcacagcaggtgctcagtctgttgaagttcctg
gttgtagagagtcaggataagctgaagagtgccatccagaagttagagcccttcccagac
cgacctgagttcagagagctgagggccgtgcagcacacactgaagtacagcacagggaaa
ttcactctcagacaggagatagcccacttcctgtctgtggcttcctgtgactccctgcct
ctgaccagactggaggggctgaaggacctgaggagacagctccacaacaacaagagccag
atcagaccgctgctgagagagtgcctcgcggaccctgcagagagtgtgttggtgctgctg
gtccttaacctactacagctctgtaagctagcagccaatcaccctggaggaagagacatc
ttagaggctgcagggagctgtctgggagagctggggcctgtggatttctccaccatcgct
ctgctccatgggaaggaccagctcaatgccagagctgtatcactcttcccttcagtggaa
ccacagtggctctacatcaccctgaactgcatcaacaacgccctcacacaccactgtatt
gaggtgaggcaagctgctgtccagagtctgaaggacatcttggccactcaggctggagct
gacttctgggagatccataaagacaaccgtgaccccatgctggcttatctcaaccctttt
aggtctaccaagaagaaggtggtcgggatgagtgaggaggtgagcttggtggctaggggg
cggctggagagccaggacctgtgggtgcctgaggctggcggccataaggcctggttgaag
atgctctgcatagttctgctggacagtggaggggtcagaagtgaaactctgctgctttcc
cggcccctgtgtctggtgaaaacagacttctgccagagggtgctgccactcatcatccat
gacatcctgctgggggactctgacggctcctggaggaagctcctctccacacatatccag
gactttttcaccagctgtgtcagtcgtgcccgggcctctagccgctccaccactcctctc
ccctcagactctgcaggagagtctgacatttccaaccagggtccgttggataaggcctct
ctgcgcaccatgctctctgttattaactatctgaggcagcaacaaagacctctaggatct
gatagtaacttgtgtggtacggtgtgccactctaacttctggttggagctgaactacctg
gaggtggccagggcagcccagtcctgctcagcccacttcacagccctgctctactctgag
atctacgtcgacaagatcaagactaacatggaggagaaccgcagaaatccggccagaacg
tcgcgcagaatcacatttgatgagagcagtcagaacttcaccatctccagtctgacagag
gagagtgtgaaagacactggtatcagtctacaggacctactgattgaggtgtatcgtagt
attggggagccagacagtctgtatgggtgtgaaggtgggaagatgaccagcgctctcacc
aggattcgaacctacgagcatgaggcgatgtggggaaaggctctgacctcctacgacctc
cactccaatcttcctgatggcacacggcaagtgggcattgtggagggtctgcagaacatt
ggtctgagcagtatcctggccacctacctgcggggtctggagagtgagggggtggagtgg
ggggcggagctaagggagctaaggtttcaggccgcctggaggaacatgcagtgggactgt
gacctatcagagaggaatgaaaaattgaaccctggcttcaacgagtcagtgttctgctcc
ttgcaggctttgagagacaaagagttttccacattcgaccaaactcttaaatatgccagg
ggcaatgaggtggaggaactgtgcaaaggcagtctggaggcagtgtcctctctctaccct
gctctacggaacctccagaggatcagtgagctggagagcatccgacaactcttctccaag
cccctgaccgacgtaggcctggccgaggtgtgttcccattggcagcagcactcccagctg
ctggtggacagtgactttacgctggtggagcccatcctggccctgcgctccgtggcccag
gagaccctaatctcccaggagagaaaccctgaaaagaacaagtacctcagcactgtcctc
acctcccacctcatggagctctgccaactggcccgcgccgcaggaaacacacagctggca
gagcgggcggttttccagatgaagcagcatggcggaggaggggggcggggctccacagcg
tcgtcatggcagctggaggaggcccaggtgttttgggcgaagggagagcagggtcttgct
ctggggctactgagacagatgatccacactctggaggagcaggttaacgttaaccctgcc
ctggtgccggtgttcacggagtgcctgaggctgtgtgggaactggctggcagagacgtgc
ctggagagccctggggtcatcctggagaagtacctggagagggcagtggttgtgatcgag
ggccatgcaataggttcagacaccaagctgcagagccagaggacgcaggccttcctgtcc
ctggccaggttctcagatgcccagtaccagggcattgataactacatgaagtcatctgag
tttgagaacaaacaggctctgctggagaaggccaaggaggaggtggacttgatgagggag
cgcaaggtcagcaccaacaggtacacagtgaaggtgcagagggagttggagctggatgag
agagctctgtccaacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaac
tacatccattgtcttgagcagggtgaggagcacgacacctgggtgttccgcctggcctca
ctgtggctggagaacgctgacgtcaagacagtcaatgacatgatgaagggaggtgtgaac
aggatcccgtcctataagtttctgcctctcatgtaccagttggctgcccgcatggggacc
aaaatgtcctctacagtggcagaggatgtgggcttctatggtgttctcaatgagctgatc
tgcctgtcgtgtctggagcacccccaccacaccctcttcatcatccttgctctggtcaac
gctaacaaggacgagagcttctcccgcagccgcctgtccaagagcaccccgcgccattcc
tcccaactggacctggagcggtctgaggtggcccaggggataatgaagaagatcaggaag
aagagagcccagatgatcagaggcatagaggtcctctgtgatgcctacatcactctggcc
tacatggacgccagtcgacacaagacagagaaaaaagccatcctcatcccctctgaccag
cccatcatgcagataaagaacctagatgatgtcatcattcctacaatggagatcaaggtg
gacccctcgggtaaatatgacaacctggtgaccatcaagtccttcaagcctcactttcac
ctggccggaggggtcaacctgcccaagatcattgactgtgtgggatcagacgggaagatc
agacgacaactggtcaagggccaggatgatctgcggcaggatgctgtaatgcagcaggtg
tttcacatgtgttctatgctgctgcagcgcaacactgagacacgcaagaggaaactcaac
atcagacgctacaaggtggtgcccttctcccagcgtagtggggttctagagtggtgctcg
gggaccgtccctataggggatttcctcatagacccccaaaagggcgctcacacacgcttc
tgcccccaagactggaccagcataacctgccggaaaaagatgatggagtctcagaggctt
ggttccggtgggaagacccaggctttcagtgaggtgtgtcagaacttccggcctgtcttc
cggtacttctgcatggagcgattcctggacccggcagtgtggctggaaaaacggctggcc
tacactcgcagtgtggccacttcctccatcgtgggctacattgttggactgggggatagg
cacattcagaacatccttatagacgaacagacagctgaactggtgcatattgatttgggt
gtagcgtttgaacagggcaagattctcccaactcctgagacggttcccttcaggctatcc
agagatattgtggatgggatgggcataacgggggtggagggcgttttcagaagatgctgt
gagaagaccatggaggtcatgagaagttctcaagaggccttgctgactattgtagaggta
ctgctgtacgaccctctgtttgactggaccatgaaccctctcaaggccttctacctgcag
cagcagcatgatgagcaggctgagctccagtccacgctcaactctacactggggggagac
atcttggaggcccaccgcaagtccagcagtgatagccagagcttcaacaaggtggcggag
cgcgtgctgctgcggctgcaggagaagctgaagggggtggaggatggcagggtgctcagt
gtaggagggcaggtcaacctcctcatccagcaggccatggaccctaacaatctcagccgc
ctcttccccggctggcaggcctgggtctag
DBGET
integrated database retrieval system
