Oncorhynchus keta (chum salmon): 118394643 Help Entry 118394643         CDS       T09424                                  Symbol tnr Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04510   Focal adhesion oke04512   ECM-receptor interaction oke04518   Integrin signaling Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118394643 (tnr)    04518 Integrin signaling     118394643 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118394643 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oke00536]     118394643 (tnr) Glycosaminoglycan binding proteins [BR:oke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118394643 (tnr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N EGF_Tenascin Fn3_VIN3 EGF_2 Fn3_Dep-1_2nd Interfer-bind FN3_Tor_3rd DUF4998 Fn3_Dep-1_1st DUF7949 Motif Other DBs NCBI-GeneID:  118394643 NCBI-ProteinID:  XP_035643965 LinkDB All DBs Position 15:24449613..24594210 Genome browser AA seq 1369 aa AA seqDB search MSPVRGWLLGQVLLLLGTQAALSQSGEEGKLVRTIRVRRQAPSDGPTSQSNNQTIKEQPM VFNHVYNINVPLESLCSVDLDSAVPLPSQATRGAVSSGSGEDATEFTEQTVDADSQVTFT HRINIPKQACACPTANIVQQLAIRIEMLEREVLLLRAQCSSGNCGCGESSAMGHLDFIPQ CSGHGSFKMDLCGCVCEDGWTGKNCSEPRCPDNCSGQGVCMEGECVCDRDFGGDNCSEPR CPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQCRPGYVGEDCSL AYCANNCSQKGICKEGFCVCQDGFAGEDCSAVAPALNLRMRGVTEHTIDLEWEGSVLMTD YLVTYVATSPGVVQLEIRIPGNTTTCSIPDLEPGIEYNINVYAVLNNVISAPTNIQVSTY LSNPDGLLFKFITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGL RPGEEYTVNLVALRDQGRSQPVSATVTTLIDGPTQLIVRDVSDSVAFVEWTNPKAKMDQI VLRYGLVGGDSPKSTFRLQPTLSQYSLQMLRPGSRYEVSISGVRKGNESGTISTEFSTVL VFLSEIDAPKNLRVLSKFSTTLELEWDNSEAEVEGYQVVYSTLAGDQYEKVIVPLNDGPT SKTTLTNLLPGTEYGIGISAMLGTNQSFPATMNARTGLDVPMDLTVTASTDNTITLLWGV VQGPIDHYMVTYTSSSGLTTEVTIPKDVTTTTLNDLEPGTEYTITVAAQRGRQQSTAATI DGFTGFRPIIALYLSDVTWDSVAVAWSAPAPPADLYILTYSSEDGTDTSKVTLDGSKTRS SIKGLLPSTEYTVSLITIHGEVKSEAVTATLTTGMDPPKEMTVSYATEDSVIISWLRPFA PFDYYKMSYQSARGTVDSVVIDNDVTNYTLSSLHPATEYEINLNVVRGSQESKSITTSVF TAMDMPMELTALNITPQGALLRWNPPLSSVDNYVFTLTCYQVTANTFLVEGVKQEHQLSK LKPSTTYSVALYATKGPLTSGTVIANFETPMDAPLNLTASEVNHRSALISWQPPIADIDN YMLTYKSVDGNRKELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSGIVSTAFTTGNR LFATPQNCAQHLLNGESLNGVYTIYINRDANQGVQVYCDMTSDEGGWIVFQRRQNGLTDF SRKWSDYRVGFGNLEDEFWLGLDNIQKLSAQGRYELRIDMKDGQESVYASYDKFAIGDVR NLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNG KYGESRHSQGINWYHWKGHEFSVPFVEMKMRPFNYRSISGKRRRSTPPE NT seq 4110 nt NT seq  +upstreamnt  +downstreamnt atgagccctgtacgaggctggctgctgggccaggttctactcctcctggggacccaggct gctctatcccagtccggcgaggaggggaagctggtccggaccatcagggtcagacgacag gcaccttcagatggccccaccagccaatctaacaaccagaccatcaaggagcagccaatg gtcttcaaccatgtgtacaacatcaacgtgcccctagagtctctgtgctcagtggatctg gactcagcagtgcctctacctagccaggccaccagaggggctgtgtccagtgggagtggg gaggatgccacagagttcacagagcagacagtggacgcagacagccaggtcaccttcacc caccgcatcaacatccccaaacaggcctgcgcctgtcctacagccaacatcgtgcagcag ctggccatccgcatcgagatgctggagagagaggtgttgctgctgagagcccagtgcagc tctggcaactgtggctgtggggagagttcagccatgggtcacctggactttattccccag tgcagtggtcatggcagcttcaaaatggacctgtgtggctgtgtgtgtgaggacggctgg acgggcaagaactgctctgagccgcgctgcccagacaactgctccggacagggagtgtgt atggagggtgagtgtgtgtgtgaccgtgacttcgggggggacaactgctcagagccccgc tgcccggcggactgctccggtcgagggctgtgcatggatggggagtgtatctgtgaggag aacttcactggagaggactgtacactgggtcgctgcctcaatgactgttctgaccagggc ctgtgcaccaacggaacctgccagtgtcgcccgggatacgtaggagaagactgctccttg gcctactgcgccaacaactgtagtcagaagggcatttgtaaagaaggcttctgtgtctgc caagatggcttcgctggagaagactgctctgcagtggctccggctctgaacctgcgcatg cggggagtgacggagcataccattgacctggagtgggaggggtcagtgttgatgacagac tacctggtcacctacgtggccaccagcccaggtgtggtccagctggagatcaggatccct gggaacaccaccacctgcagtatcccagacctggagcctggcatcgagtacaacatcaac gtctacgctgtgctcaacaacgtcatcagtgcccctaccaacattcaggtgtcaacctat ctctcaaatccagacggtttactcttcaaattcatcacagagacgtcagtggaggtgcag tggcaacctttctactactcctttgatggctgggaaataagcttcattcccaaggacaat gatggagggatgacagcccagctacccagcaccatcacttcgttccaccagacaggcctg aggccaggggaggagtacaccgtcaacctggtagctctgagggaccaaggccgcagccag cctgtatccgccaccgtcaccacattgattgatgggccgacacagctgatagtgcgtgat gtctcggactcggtggccttcgtggagtggaccaatcccaaggccaagatggaccagata gtgctgcgttatggcctggtaggaggggacagtcccaagagcactttccgtcttcagccc accctcagccagtactccctgcagatgctgaggccaggctcgcgctatgaggtgtccatc agtggtgttcgcaagggcaatgagagtggaaccatctccacagaattcagcaccgttctg gtgttcctctcagagatcgacgcgcccaagaacttgcgagtgctgtccaagttctccacc accctggagctggagtgggacaacagcgaggcggaggtagaggggtaccaggtggtctac agcaccctagcaggagaccaatacgaaaaagtcattgtcccactcaacgatggacccacc agcaagaccacactcacaaacttgttgccaggtacagagtatggcattggcatatcggct atgcttggcaccaaccagagttttcctgccacaatgaacgccagaactggtctagatgtc cccatggacctaactgtgacagcgtccacagacaacaccatcaccctgctgtggggggtg gtccaggggcctattgaccactacatggtcacctacacctcctcatctggcctgaccacg gaggtgaccatccccaaggacgtgaccaccaccacgctcaatgacctggagccaggcaca gaatacaccatcactgtagctgcccagaggggaaggcagcagagcactgcagccaccatc gatggcttcacaggcttccgccccatcatagcactctacttgtctgatgtcacatgggac tcggtggcggtggcatggagtgcccctgccccacccgcagacctctacatcctcacctat agctctgaggacggcactgacacgtccaaggttaccctggatggatccaagacccggtcc tctatcaagggactcctgccctccacagagtacaccgtcagccttatcaccatacatgga gaggtgaagtctgaggctgtcacagccacgctcaccacaggaatggatccacctaaagag atgactgtgtcatatgccactgaagactccgtcatcatatcatggttgagaccatttgct cccttcgactactacaagatgtcctatcaatcagcaagagggacagtggacagcgtggta attgacaatgacgtcactaactacaccctatccagcctccacccagcaacagagtatgag atcaacctgaacgttgtgcgaggcagccaggagagcaagtccatcaccaccagtgtcttc acagcgatggacatgccaatggaactaacagccctcaacattaccccacaaggagcttta ctccggtggaaccctcctctgtccagcgttgacaactacgtgttcaccctcacctgctac caggtgacagctaataccttcctggtggaaggtgtgaaacaggagcaccagcttagtaaa ctcaagcccagcaccacttactctgtagccctctacgccaccaagggacccttgaccagt ggaaccgtcatcgcaaactttgaaacacccatggacgctcctctgaacctgacggctagc gaggtgaaccaccgcagtgccctcatctcctggcaaccgcccatcgcagacatcgacaac tacatgctcacatacaagtcagtggacggcaacagaaaggagctgatcctggatgccgag gacacttggatccgtctggaggggctggcagaaaccacagaatacactgtgaggttgcag gctgccaggggattagagaccagcggaatcgtctctacggccttcacaacaggaaatcgt ctgtttgccaccccccagaactgtgcccagcatctgttgaacggggagtccctcaatggc gtctacaccatctacatcaacagagatgccaatcagggagtgcaggtctactgtgatatg acctcagatgaaggaggctggattgtgttccaacgtcgtcagaacggcctgacagacttc tccaggaagtggagtgactacagggtcggctttggaaacctagaggatgaattctggctc ggtttggacaacatacagaagctctcagctcaaggtcgctatgagctccggatcgacatg aaggatggccaggagtctgtctacgccagctatgacaagtttgccattggagacgtcagg aatctgtacaaactcaggataggagagtacaatggcacagctggggactcgctgagctat caccaaggccgtcccttctccaccaaggacagagacaatgacatcgccgtgaccaactgt gctctgtcctacaaaggagcctggtggtacaaaaattgccatcgggccaacctgaacggg aaatacggcgagtcgagacacagtcagggtatcaactggtaccactggaagggccatgag ttctctgtcccctttgtggagatgaaaatgaggccgttcaactaccgcagcatcagtggc aagcgaaggaggtccactcctccagaataa

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