KEGG   Oncorhynchus keta (chum salmon): 118394644
Entry
118394644         CDS       T09424                                 
Name
(RefSeq) tenascin-N-like isoform X1
  KO
K06252  tenascin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
oke04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118394644
   04518 Integrin signaling
    118394644
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118394644
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oke00536]
    118394644
Glycosaminoglycan binding proteins [BR:oke00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   118394644
SSDB
Motif
Pfam: fn3 Fibrinogen_C Fn3_Dep-1_3rd Fn3_PBP1 EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C EGF_2 EGF_Tenascin EGF_PEAR1L DUF7949
Other DBs
NCBI-GeneID: 118394644
NCBI-ProteinID: XP_052319690
LinkDB
Position
15:complement(24623308..24661742)
AA seq 1384 aa
MTTRLHWLLRALCLIGILCTVTTTYVTEDSPAPAEKGVTFSHIYKIDLTKSPGCKLALQT
IPHQQDQGLGLQELEGGPTLEGDKDIVFRHQINLKTSKCDCDESERFKSLLYRVNGLEEE
VEHLKSRCSQGFCGGKGGGAGGVDTSCSGHGTYQHDTCSCQCNSGWEGPDCSISTCPDEC
NDHGRCVDGKCVCLAGYMGSDCRQLMCPGDCNDKGYCVDGKCVCFSHFTGEDCSEQKCSP
DCVHGTCVNGMCICDEGFFGDDCSAVFSPNGLRLVRMTDVSLLVEWQAVTAAEYYVLAWH
PEGNEAELERVTVPNTDTSYLITGLRPGVTYIVQVYAVIKEIQSEGDRIEATTVVSGIDG
IRVLGQTEDSIQVDWQNPAAPLDHFRLTHANPDGQEEEQLVPMNAEARTTNTIVGLQPGT
EYLITVQGIKGTIEGKASFVTGVTDLDAPTNLLTKEVTEDTATVEWQKVQAEIDGYVISY
SSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTEAETDLDAPANL
LTREVTEDTTTVTWEKVQAEIDSYVISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTV
YIWAVKGSRVSRKSSTEAETDLDAPTNLLTREVTENTADVSWDRPLGDIDGYMISYSSAE
GSSGEIPVGADSSSYRLTGLRPGVIYTVDIWAVKGSRVSRKSSAIAETDLDAPTNLLTRE
VTEDTADVSWDRPLADIDGYVISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWA
VKGSRVSRKSSTVAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYMISYSSAEGSSG
EIPVGADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSAVAETDLDAPTNLLTREVAED
TADVSWDRPLADIDGYMISYSSVEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGS
RVSRKSSTVAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYMISYSSAEGSSGEIPV
GADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTPAETEIDSPKNLKASDVKLDAATL
TWTAPLARIDGYILTFRAEDGTLKTFEKKLREGESRFAMSGLEMGKNYIVTLLAYRGAKK
SRVIETTFKTVGLLHPFPMDCTQIKTNGNMASGIYTIYINSDRTKPMDVYCDMDTDGGGW
VVLQRRNNGQMDFMKRWRQYMAGFGNMTDEFWLGLDNIYELTNTPTQYELRVDLGVGSEK
AYAVYDNFKIAPAKQKFKLTIGKYRGTAGDAMNYHQGRPFSTVDNDNDIALGNCALTHRG
AWWYKNCHLANLNGKFGDNRHSMGVNWEPWKGHLMSLDFTEMKIRPVGAARKRRSLSSRT
APRK
NT seq 4155 nt   +upstreamnt  +downstreamnt
atgactactagacttcactggctcttaagagccctctgcctgataggcatactgtgcact
gtcactaccacatatgtgacagaagattctccagcccccgctgagaaaggagtcaccttc
agccacatctataagatagacctgaccaagagccctggctgtaaattggccttgcagacc
attcctcaccagcaggaccagggattaggtctgcaagagctggaggggggccctactctg
gagggggacaaggacatagtattcaggcaccaaatcaacctcaagacctcaaagtgtgac
tgtgatgagtcggagcgcttcaagtctttgctgtacagagtcaacgggctggaggaggag
gtggaacacctgaagagtcggtgctcccagggcttctgtggtggcaaaggtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacgacacctgcagctgc
caatgtaactctggctgggaaggcccagactgctccatctccacctgtcctgatgagtgc
aacgaccatgggcgctgtgtggacgggaagtgtgtgtgccttgctggctacatggggagt
gactgcaggcagctgatgtgcccaggtgactgcaacgataagggatactgcgtggacggg
aagtgtgtgtgcttcagccacttcaccggcgaagactgcagcgaacagaaatgcagtcct
gactgcgtccacggtacctgcgtgaatggaatgtgtatctgtgacgagggcttcttcggg
gatgactgctctgcagtgtttagccctaacggcctgcgtctggtcaggatgactgatgtc
tcgctgctggtagagtggcaggcggtgacagcagcagagtactacgtcttggcctggcac
cctgagggcaacgaggcagagctggagcgggtcaccgttcccaacacagacacctcctac
ctgatcaccggtcttaggccgggggtcacctacatagtgcaggtgtacgctgtcatcaag
gagatccagagcgagggggacaggatagaggcgaccacagtggtgtctggtattgatggt
atcagggtattgggccagactgaggactctatccaggtggactggcagaaccctgcagca
cctctggaccacttcagactaacccatgctaaccctgacgggcaggaggaggagcagctc
gtacctatgaatgcagaggccaggaccaccaacaccatcgtaggactgcaacctggcact
gagtacctcatcacagtgcaaggcatcaaaggcaccatcgaggggaaagcctccttcgtc
accggggtcacagatcttgacgctcctacgaacctcttgaccaaagaagtgacagaggac
actgctaccgtggaatggcagaaggtacaggcagagatcgacggctacgtgatcagctac
agctctgctgagggctccagtggggaaatccctgtgggggcagacagcagctcctacagg
ctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaagagctccacagaagctgagacagatctggatgctcctgctaacctg
ttgaccagagaagtgacagaggacacaacgacagtaacatgggaaaaagtccaagctgaa
attgacagctatgtgatcagctacagctctgctgagggctccagtggggagatccctgtg
ggggcagacagcagctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatctgggctgtcaagggctcccgggtcagcaggaagagctccacagaagctgagaca
gatctggatgctcctactaacctcttgaccagagaagtgaccgagaatacagccgatgtg
tcgtgggacagacctctaggggacatcgacggctacatgatcagctacagctctgctgag
ggctccagtggggagattcctgtgggggcagacagcagctcctacaggctgactgggctg
aggcctggagtcatctacacagtcgacatctgggctgtcaagggatccagggtcagcagg
aagagctccgctatagctgagacagatctggatgctcctactaacctcttgaccagagaa
gtgaccgaggacacagccgatgtgtcgtgggacagacctttagcggacatcgacggctac
gtgatcagctacagctctgctgagggctccagtggggagatccctgtgggggcagacagc
agctcctacaggctgactgggctgaggcctggagtcatctacacagtctacatctgggct
gtcaagggctccagggtcagcaggaagagctccactgtagctgaaacagatctggatgct
cctactaacctcttgaccagagaagtgaccgaggacacagccgatgtgtcgtgggacaga
cctttagcggacattgacggctacatgatcagctacagctctgctgagggctccagtggg
gagatccctgtgggggcagacagcagctcctacaggctgactgggctgaggcctggagtc
atctacacagtctacatctgggctgtcaagggctccagggtcagcaggaagagctccgct
gtagctgagacagatctggatgctcctactaacctcttgaccagagaagtggccgaggat
acagctgatgtgtcatgggacagacctctagcggacatcgacggctacatgatcagctac
agctctgttgagggctccagtggggagatccctgtgggggcagacagcagctcctacagg
ctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaagagctccactgtagctgaaacagatctggatgctcctactaacctc
ttgaccagagaagtgaccgaggatacagccgatgtgtcgtgggacagacctctagcggac
atcgacggctacatgatcagctacagctctgctgagggctccagtggggagatccctgtg
ggggcagacagcagctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatttgggctgtcaagggctcccgggtcagcaggaagagctccacaccagctgagaca
gaaattgattcgcctaagaacctaaaagcgtcagatgttaagctggacgctgcgaccctg
acctggactgctcccttagccagaatcgatggctacatcctcacattcagagctgaggat
ggcacattgaagacttttgagaagaagctgagggaaggagagagcaggtttgccatgtca
ggcctggagatgggaaagaactatattgttaccctcctcgcttacagaggagcaaagaag
agcagagtgatagagaccacattcaaaacagtgggtttgttgcacccgttccccatggac
tgtactcagattaagacgaatggtaacatggcaagtggaatctacacgatttatatcaac
agtgatcgcaccaagcccatggacgtgtactgtgacatggacactgatggcggtggatgg
gtggtgttacaaagacgcaacaatggacagatggacttcatgaagcgctggagacagtac
atggccggctttgggaacatgactgatgagttctggctcggtctggacaatatctatgag
ctgaccaatactcctacccagtatgagttgcgagtggacctgggagtgggttcagagaag
gcctatgccgtctatgacaacttcaagatagccccggcaaagcagaagttcaagctgacc
atcggcaaatacagaggaacagcaggtgatgccatgaactaccatcaaggtcgccctttc
tctactgttgacaatgacaatgacattgctcttggtaactgcgccctgactcatcgtggc
gcttggtggtacaagaactgtcaccttgccaacctgaacggcaaattcggagacaacaga
cacagcatgggtgtgaactgggagccatggaaaggccacctcatgtctcttgatttcact
gagatgaagatccggccagtgggcgccgccaggaagaggaggtcacttagcagcagaaca
gctcccagaaaatag

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