Oncorhynchus keta (chum salmon): 118394804
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Entry
118394804 CDS
T09424
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118394804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118394804
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118394804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
118394804
NCBI-ProteinID:
XP_035644259
LinkDB
All DBs
Position
15:32936804..33168648
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AA seq
1395 aa
AA seq
DB search
MLLLSSQATERTIPGATSKAVTAHQSGGGKTAVDHISVILNGTLGREEVGSRSVAGQVAR
YAALEQSHPAAGSTRARQHALQGEEGRFSLGRIRQDLGRWPSLSHTGRVERRREDAVQEE
EEVEKEDGGEMTTDRFLQLQQPSNNSAAPAAAQPSQSDWETTAVEVEVDTATAAPEQQKT
QVETQGQDISPQYEGSLLGHNGGVLAGGGRLPRAVLRRKPSQDSAAPDSRRVVSMYGAPA
WQQRGSLSDQDRTDKPRRPRSVCMLGGPNLNPALLQPGSHRSHSQQSSRRVATGSLDGPP
QHCWTRRAELRAVDGLKPGVLPQRTVAEEKVVPRVRQQTWKQRPVSMTMLELRKKASGSQ
DELDSHRGSQVRGLFGRWRIFGRPAQDKEKDKEGARAPGSKPASRLDVPKKTLSSLRRSL
SLRIRRNRPRGRVEISEVTAEERSRTKSIGQETSLPSRPFSYLTGRSLPPPYERDNDGGM
QNIQYHSQGKVKVMEVPLYPARLSSTKPAHEEPSVWQLIASRFRRKEQQQPPNGKCKLQP
QPLSKETGKYPLAGNKKPQLVSIETLAGVDCSKGQDSFVNSQEWTLSRSVPELKVGIVGN
LSSGKSALVHRYLTGTYVQEESPEGGRFKKEMVVDGQSYLLLIRDEGGPPELQFAAWVDA
VVFVFSLEDEISFQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPRVIDDSRARKLS
NDLKRSTYYETCSTYGLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPNSPSHSSVPNAS
LPSVHINQAANGGVAFSDYSSSVPSTPSISQREMRIETIAASNTPTPIRKQSKRRSNIFT
SRKANSEQAKTTDSKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYH
PSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVTTIAPTASPKTNGLTKDRSTLQLGVGT
TGAPHSNSNTSLQSERSVSGGGLVGFGGSKDSMHQRSFSVSSADQWNEAVINTSASTGAA
NGMGEPLTCSSGVGSATSPKLEPPPSPHANRKKHRRKKSTGITKPDGPSAGNEESEESFE
FIIVSLTGQMWHFEASTFEERELWVTAIESQIFASLQSCESMKNKSRLGSQSDAASIQSI
RNVRGNSICVDCDAANPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPVGLSM
VMMAIGNAMANSVWEGALEGYTKVGADSTREERERWIRAKYEQKLFLVGLPQSDVPLGQQ
LLRAVVEDDLRLVVLLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDV
KSRDARGQTPLSCARRAGSQECSDILLQHGCPNDPVSSSSLTTPNMSRRNPNVNPNPNVN
NNNALSELNRSVSIM
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgctactactgagcagtcaggcaacggagcggactatccccggggccacaagtaaagct
gtcacagcccaccagtcaggaggaggtaagaccgcggtggaccacatttctgtcatcctg
aatggaactctgggccgtgaggaggtgggttcgaggtcggtggcgggccaggtcgcccga
tatgccgcactagagcaaagtcatcctgcagccgggagcactagggcacgacagcacgcg
ctgcagggggaggagggacgcttcagcctgggcaggatacggcaggatcttggcaggtgg
ccctccctgagccacacaggcagagtggagaggaggagggaggatgcagtgcaggaggag
gaggaggtagagaaggaggatgggggggaaatgacaacggaccggtttctccaactacaa
cagccctccaataactcagcagctccagcagcagcccaaccttctcagtcagactgggag
actacagcggtagaagtagaggtagatacagccacagcagctccagagcaacagaagacc
caggtagaaacccagggacaggacatttctccccagtacgaagggtctctccttgggcat
aatggtggtgttctggccggcggtggccgtctaccccgggcagtgctccgcaggaagcca
tcccaagacagtgctgcgccagacagcaggagggtggtgagcatgtatggagccccagcc
tggcagcaacgaggctcgctaagtgaccaggacagaacagacaaacccaggaggcccagg
agtgtgtgcatgctgggaggccccaacctcaaccctgccctgttgcagcctgggtcccac
aggtcccactcccagcagagctccagaagggtggctacaggatctctggacggtcccccc
cagcattgctggaccaggagggcagaactgcgggcggtggacggcctcaagccgggggtg
ctccctcagcggacagtggctgaggagaaggtggtccccagggtccggcagcagacctgg
aaacagagaccagtcagtatgacaatgttggagctgaggaagaaggcctctgggtctcag
gacgagctggatagccataggggaagccaggttagaggtctgttcggccgctggaggatc
tttggccgaccagcccaggacaaggagaaggataaggagggagcccgagccccaggttcc
aagcccgccagcaggctggacgtccccaagaagaccctgagctccttacgccggagtctc
agtttgcggatcaggaggaaccggccgcgggggagagtggaaatatccgaagtgacggca
gaggaacgctcacgcactaaaagtatcgggcaagagacatctctcccctcacggcccttc
tcctacctcaccgggaggtccctgccacccccttacgagagggacaatgatggagggatg
cagaacattcagtaccacagccagggcaaggtcaaggtgatggaggtgcccctctaccca
gccagactgtcctccactaaaccagcccatgaagagcccagcgtgtggcagctcatagcc
agccgctttaggaggaaggagcagcaacaaccgcccaacggtaaatgtaaactccagccc
caacccctgagcaaagagactggcaaatatcccctggctgggaataaaaagcctcagtta
gtttccatagagactctggcaggcgtcgactgcagcaaaggtcaagactctttcgtcaac
agccaagaatggacattgagtcgatcagtgccagagctcaaagtgggtattgtgggtaat
ctgtcgagtgggaaatcggcccttgtccaccggtacctgacaggcacgtacgtgcaggag
gaatcccctgaaggtggtcggttcaagaaggagatggtggttgatggacagagctacctg
ctgctgatcagagacgagggaggccccccggagctgcagtttgcagcgtgggtagacgct
gtggtgtttgtcttcagtctggaggacgagatcagtttccagacagtctacaactacttc
ctgcgtctgtccagttacaggaacacagcagaggtccccatggtcctggtcgggacgcaa
gatgccatcagtgctgccaaccccagagtgatcgatgactcacgggccaggaagctgtcc
aacgacctgaagcgttccacctactacgagacctgctccacctacggcctcaatgtggag
agagtcttccaagatgtcgcccagaaggtggtggctctgaggaaaaagcagcagctgtct
attggtccgtgcaagtcccttcccaactcgcctagccactcatcagtccccaacgcatcc
ctcccctctgtgcatattaaccaggcggcgaatggcggggttgcgttcagcgactactcc
tcctcggtgccttccactcccagcatcagccagagggagatgcgcatcgagaccatcgcc
gcctccaacacgcccacacccatccgcaagcagtccaagcgccgctccaacatcttcaca
tcacggaaagccaacagtgaacaggcaaagaccactgacagtaaaacagatagtataggc
agtggaagggccatacccatcaaacagggcatccttctgaagagaagtgggaagtccctg
aataaggagtggaagaagaaatacgtcactctttgtgacaacggcctcctcacctaccac
ccaagtttacatgactacatgcagaatgtgcacgggaaagagattgacctgttgaggacc
acggtcaaggtgccagggaaacgaccacctagagcagtcaccactatcgcccccaccgcc
agccccaagacaaacggactgaccaaggaccgcagcaccctgcagctgggcgtaggcacc
acaggtgcgccccattctaacagcaatacatccctccagtcagagcgttcagtcagcgga
ggaggcctggtgggcttcggtggcagtaaggacagcatgcaccaacgctccttctctgtt
tccagtgccgaccaatggaacgaggccgtcatcaacaccagtgcaagcactggggctgcc
aacgggatgggcgagcccctaacctgcagctctggagtgggcagtgccaccagtcccaag
ctggagcctcccccctcacctcacgccaaccgcaagaaacacagacggaaaaagagcacg
ggcatcaccaagccagacgggccgtctgcaggcaatgaagagtcggaggagtcttttgag
ttcattattgtgtctctgacgggtcagatgtggcatttcgaggcgtctacgtttgaggag
agggagctgtgggtcacagctatcgagagccagatctttgccagcctgcagtcttgcgag
agcatgaagaataagtcccggttaggcagccaaagtgatgcagcgtctattcagtccata
aggaacgtgagagggaacagcatctgtgtggactgtgatgcagccaacccggactgggcc
agtcttaacctgggggctctgatctgtatcgagtgttcagggatccacaggaacctgggg
acccacctgtcaagggtccgctccctggacctggatgactggcccgtggggctcagcatg
gtgatgatggctataggcaacgctatggccaacagtgtctgggagggggccctggagggg
tacaccaaggtgggcgctgacagcaccagggaggagagggagcggtggatccgggctaag
tatgagcagaagctgttcctggtgggtctcccccagtcggatgtgcccctggggcagcag
ctgctccgggccgtggtggaggacgacctgaggctggtggtgctgctgctggcccacggc
accaaggaggaggtcaacgagacgtacggagacggggacggacgcaccgccctgcatctg
tcctgtgccatggccaacgtggtcatcacccagcttctcatctggtacggtgtggacgtg
aaaagtcgggacgcgcgcggccagacgccgctgtcctgcgcccggcgggcaggaagccag
gagtgttctgacatcctgctccagcacggctgccccaatgatccggtcagcagcagcagc
ctcaccacccccaacatgagccgcagaaaccccaatgttaaccccaaccctaacgtcaac
aacaacaatgccctcagtgagctcaaccgcagtgtcagtataatgtag
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