Oncorhynchus keta (chum salmon): 118394902
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Entry
118394902 CDS
T09424
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118394902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118394902
Spliceosome [BR:
oke03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118394902
Complex C
U4/U6.U5 tri-SnRNP related factors
118394902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
118394902
NCBI-ProteinID:
XP_035644438
EnsemblRapid:
ENSOKEG00005049527
LinkDB
All DBs
Position
15:38933575..38949851
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AA seq
478 aa
AA seq
DB search
MANNTVAANQQQPQAVSRIGPNAGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
IKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKLIDTQMKARPRKVPEKVEQPEEPPAEGRRR
SRSPRPTPSPRRTPKRSRSRSHHRERERHGPSFDRELERERDRQRKERDSGDGKGEERER
RRSRSADRTQERRERRRSRSGSRERKGEQKDREKDGQGCMENDRRKDREYHKDGGSERER
SKDKRSKGEVEDRRQKEERDERRGHREERKAKRSSRSASRERRRKKSIKRQVQEENRGGA
EVGEEKEKSRKKQCSREGEQRSHKHSRSKERSHRPREPSNGRDHVKHRECKMSQSTER
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtcgccgcgaaccaacagcaaccacaggccgtgagcaggattggc
cctaacgctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgttctctcgtctccatatttcaaagtgcagctgtat
gaattgaaaacctaccatgaggtggtggatgagatctatttcaaggttactcatgttgag
ccctgggagaaaggcagtaggaagactgccggacagactggaatgtgcggaggggtgcgg
ggagtcgggaccggtggcattgtgtccacagccttctgcctgctgtataaactgtttacc
atcaagatgacccgtaaacaggtgatgggactgatcactcacaacgactcaccctacatc
agagcacttggctttatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggtggctgcgtt
atgacaatcggagagatggtccggtcgttcctcaccaagctggagtggttctccactctc
tttccacgcatcccggtgcccgtgcagaagctgatcgacacgcagatgaaggcaaggccc
cggaaggttcctgagaaggtagagcagcctgaggaaccaccggcagagggccgtagacgc
tccaggagccccagacctaccccgagccccaggaggactcccaaacggtcgaggagccgg
agccaccaccgcgaacgagagcgccatggccccagcttcgaccgcgagctggagagggaa
cgcgaccgccagaggaaagagcgggactctggggacgggaaaggagaagagagggagagg
cgtcggtcccgcagcgcagaccgtacccaggagcgccgggaacgtcgcaggagccgcagc
gggagccgggaacgcaagggagagcagaaagacagggagaaagatgggcaggggtgcatg
gagaatgacaggaggaaggacagggagtaccataaagatgggggcagcgagagggagcgg
tccaaggacaagaggagcaagggagaggtggaggacaggagacaaaaagaagagagagat
gagaggaggggtcacagggaggagaggaaggccaagcgctccagtcggagtgcaagcagg
gaaaggagacgcaagaagtccataaagcgacaagtccaagaagagaacagaggcggggct
gaggtaggggaggagaaggagaagagtaggaagaagcagtgcagtcgggagggggagcag
cgctctcacaaacacagccgcagtaaagagcggagccatcggccacgtgagcccagcaac
ggtagagaccacgtgaaacacagggagtgtaaaatgagccagagcacagagcgttga
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integrated database retrieval system
