Oncorhynchus keta (chum salmon): 118395091
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Entry
118395091 CDS
T09424
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118395091
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118395091
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118395091
NCBI-ProteinID:
XP_035644771
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All DBs
Position
15:14343999..14346508
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AA seq
244 aa
AA seq
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MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDSGQFSTGAVQRISEIPHALAANGLSYAPSLGYQT
GAFGSLGCPSQHTHTHPSSTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaactctgaaatcagcaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgatgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
acggagtccattttggcttccgctgagaaagctcgagcccttttgccgccgacatcatca
ccatactcgctccttgactcaggtcaattcagcaccggtgctgtccagaggatctcagaa
attccccacgctctggctgccaacggcttgtcatatgcgccctctttgggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcatactcacccgtcctccacg
aacccggggtacgccttgccctgtaactgtggcacctggtcggcgacgggtttacagcct
caggttgcatacatcctttttccaggtatggccggtatagacccgtactcctgttcacca
cattcaagtgtgtga
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integrated database retrieval system
