Oncorhynchus keta (chum salmon): 118395212
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Entry
118395212 CDS
T09424
Name
(RefSeq) contactin-associated protein-like 2
KO
K07380
contactin associated protein-like 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecule (CAM) interaction
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118395212
04517 IgSF CAM signaling
118395212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118395212
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
118395212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
Syndecan
Motif
Other DBs
NCBI-GeneID:
118395212
NCBI-ProteinID:
XP_035644857
LinkDB
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Position
15:27416325..27484033
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AA seq
1313 aa
AA seq
DB search
MLPGKELTLLLWIFSRFSSLSAASSASRKCDEALATPLSHTAFTSSSVYSSGYGAGYAKL
NRRGGAGGWSPVDTDHYQWLQVDLGTRKQVTSIATQGRYSSSDWTMQYRLLYSDTGRNWR
PYLQDGNIWAFSGNSNSESVVRHDLQHAVITRYVRIIPLEWSEEGRIGLRVEVYGCSYWA
DVINFEGQGVISYRFKMKMKILKDVISLKFKTTASNGVLLHGEGQQGDYISLELKRSKLL
LMINLGSNQYGSILGHTSVTSGSLLDDDHWHSVIIERYRRNVNFTLDRHTQHFRTNGEFD
HLDLDYEISFGGMPVSAKPSSGGRENFVGCMEGITYNGDNITNLVKRKKIDTSSFRNLTF
SCSETHSFPVFFNATSFLRLPGLQDSDTLSVSLSFRTWNPSGLLFYTALADGVVEVGLTE
GKVTVYINVAQKKNTRIDISSGSGLNDGQWHNVYLHALENYAMLTIDGDEASTVRTVIPI
QIRTGGQYYFGGYFLRTNTPPAQRSFQGCMQLIHVDDQLADLVAVEQGNMGTFENVSLDM
CAIIDRCVPNHCEHGGRCTQTWDSFRCSCNGTGYTGATCHTSVYEQSCEEYKHLGKTSGT
YWIDPDGSGPVGPFKVNCNMTEDKVWTTVRNNLSPQTSVSGSDLERKALLQLNYNMSTEQ
VTAITSSAEYCEQHVAYACRMSRLLNNPAGSPFTWWVGRANERHYYWGGSGPGIQKCACG
IERNCTDPKYYCNCDADQTRWREDAGLLVYKDHLPVSQVVVGDTNRAGSEAKLTVGPLRC
QGDGNYWNAASFNTPASYLHFPTFQGETSADISFYFKTSSSYGVFLENLGNADFIRLELK
AATVVSFSFDVGNGLVELSVRSSTPLNDDQWHRVVAERNVKEAVLQLDGQFKEVRPAPPQ
GHTRLELYSQLYVGASGGQRGFLGCIRALKMNGVTLDLEERAKVTPGVKPGCSGHCTSYG
QHCRNGGQCMEKYNGYSCDCTLTAYDGPFCTEDVGGYFESGTLVRYDFLPEGGLPAIRDV
KSLSPLLPTEGNLTQEELVFSFSTSNTPSILVYISSRTQDYLAVVLRHNGTLQIRYSLGG
LREPFTIDLDQRNMANGQPHHINISRQERNIRLQLDHYPPVSYTLPAGSDTKFNLVKTIF
LGKVFETGQIDPVLIEKYNTPGFVGCLSRVQFNNIAPLKAALRSGIVAPVTTQGILVESN
CGASPLTISPMAAANDPWHLDSAGAVFPFNEERVSRDGVDRNAAIIGGIIAVVIFTILCT
LVFLIRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgggaaaggagctaacgttactgctctggatcttcagtcgcttcagcagcctc
agcgcggcatcttcagcatcccggaaatgtgatgaagcgttggccacaccactctctcac
acagcttttaccagctcttctgtgtactccagtggatatggggctggatacgcaaagctc
aacagaagaggaggtgctggaggctggtctcctgtggacactgatcattaccagtggctg
caggtggacctgggaaccaggaagcaggtcacgtccatcgccacacagggcaggtacagc
agctctgattggacaatgcaatacagactcctgtacagtgacacaggaaggaactggaga
ccatatctgcaagatggcaacatatgggcattttctggcaactccaacagtgagagtgtg
gtccgccatgatctgcagcatgcagtcataacacgctacgtgcgcatcatcccactggag
tggagcgaagaggggaggattggcctgcgagtggaggtctatggctgttcttactgggcg
gatgtgatcaacttcgaaggccagggtgtgatctcctaccgcttcaagatgaagatgaag
attttgaaggatgtcatctccctgaagtttaagaccacagccagtaacggtgtgctgctg
cacggggaaggacagcaaggagactatatcagcctggagctgaagagatccaaactactg
ctcatgatcaacctgggcagcaatcagtacggctccatcctcggacacacctctgtgaca
agtggaagtttattggatgatgaccactggcactccgtaattatcgagcgttaccgacgg
aatgtcaactttaccctggatcgccacacacagcacttccgcaccaacggggaatttgat
catcttgacctggactacgagatcagctttggaggcatgcctgtctctgccaagcccagc
tcgggaggcagggagaactttgttggttgcatggagggcatcacctacaacggagataac
attaccaacctggtcaagagaaagaaaattgatacttcaagttttaggaacctgacgttc
tcctgcagtgagacgcactccttccctgtgttcttcaacgccaccagcttcctgcgtctc
ccggggctgcaggacagcgacaccctgtcggtcagcctgtccttccggacgtggaacccc
agcggcctgctcttctacacggccctggctgatggcgtggtggaggtgggcctcacagag
ggaaaagtcaccgtctacatcaacgtcgcccagaagaaaaacacacgtatagacatctcc
tcaggttcggggctcaacgacggccagtggcacaacgtctacctccatgctctggagaac
tacgccatgctgaccattgatggtgacgaggcatccactgtcagaacggtcattcccatt
cagatcagaacagggggacaatactactttggaggctacttcctgcgtaccaacacgccc
cctgcccagcgctctttccagggctgtatgcagctgatccacgtggacgaccagctcgct
gacctggtggctgtagagcaaggcaacatgggaacctttgagaatgtcagcctggatatg
tgtgccatcatagacaggtgtgtccctaaccactgtgaacatggaggccgctgcactcag
acctgggacagtttcaggtgctcctgcaatgggacaggctacactggggctacatgccat
acctccgtgtatgaacagtcctgtgaggaatacaaacatcttggtaaaacatctggcacg
tactggatcgaccctgatgggagtggtcccgtaggccccttcaaagtcaactgcaacatg
actgaggacaaggtgtggactacagtgagaaacaacctgtctccccagacctcagtgagt
ggctcagacttggagaggaaggctttgctgcagctcaactacaacatgtccacagagcag
gtgacagccatcacgagcagtgcagagtactgtgaacagcatgtcgcctacgcctgtaga
atgtctcgactgctcaataacccagctgggtccccattcacatggtgggttggcagggcc
aatgagaggcattattactggggtggttcaggaccagggatccagaagtgtgcctgtgga
atcgaaaggaactgcaccgaccccaagtactactgcaactgtgacgctgaccaaacgcgg
tggagagaggacgctggtctcctggtgtataaagaccatctgcctgtgagtcaggtggta
gttggtgacactaaccgtgctggctctgaggctaagctgactgtgggtccactgcgttgt
caaggagatggtaactactggaacgcagcatccttcaacacgcctgcatcatacctgcac
ttccctaccttccaaggggagaccagtgctgacatctctttctatttcaagacttcctcc
tcttatggcgtctttctggagaaccttggcaatgctgacttcatccgcctggagctaaaa
gctgccacagtggtgtccttttcctttgatgtgggcaacggtctggtggagctgagtgtg
aggtcatccactcctcttaatgatgaccagtggcacagggtggtggctgagcgcaacgtg
aaggaggctgtgctgcagctggatgggcagttcaaggaggttcgccctgcacccccacag
ggtcacactcgcctggagctttacagccaactctatgtcggtgcatcgggtggccagagg
ggcttcctaggatgtatccgtgccctgaagatgaacggtgtgacccttgacctagaggag
agggcgaaggtcaccccgggggtgaagcctggctgctctggccactgcaccagctatggg
cagcactgcagaaacggtggccagtgcatggagaaatacaacggttactcatgcgactgc
accttgacggcatatgacgggccattctgcactgaagacgtgggtggctacttcgagagt
ggaacactcgttcgttacgacttccttcccgaggggggccttccagccatcagggatgtg
aagagcctgtctcccctgctgcccacggagggcaaccttacacaggaggagctggtgttc
agcttcagcacctccaacacccccagcatcctggtctacatcagctccaggacccaggac
tacctggctgtggtgctcagacacaatggaacacttcagatccgctacagcctgggaggc
ctgagggagccgttcaccatcgacctggaccagcgcaacatggccaacgggcagccccac
cacatcaacatctccaggcaggagaggaacatacggctgcagttggaccattacccccca
gtcagctacactctgcctgctggctctgacaccaagttcaacctggttaaaactatattc
ctgggcaaagtctttgaaactggccagattgacccagtcctcatagagaagtacaacacc
ccagggttcgttggctgtctgtccagagttcagttcaacaacatcgcccctctgaaggca
gcactgaggtctggcatcgtcgccccagtgaccacccagggcattctagtggagtccaac
tgcggggcgtctcctctcaccatctcacccatggctgctgccaatgacccctggcacctg
gactcagctggtgctgtattcccattcaacgaggaaagagttagccgggatggagttgat
cggaacgctgcaattattggaggtatcattgctgtggtcatcttcaccatcctctgcacc
ctggtgttcctgattcgccatatgttccgtcacaagggctcctaccacaccaatgaggcc
aaaggggcggagtctgcggactgtgccgatgcagccatcattgtcaatgacccagccttc
acagaaaccattgatgagagcaagaaggaatggttcatttaa
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