Oncorhynchus keta (chum salmon): 118395249
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Entry
118395249 CDS
T09424
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118395249 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118395249 (chd8)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118395249 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
RcpB
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
118395249
NCBI-ProteinID:
XP_052320100
LinkDB
All DBs
Position
15:complement(42178036..42206769)
Genome browser
AA seq
2570 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPGDAFTQGSSDPVEEALKLALGQIDPPYEPTPALCTPVAA
PIIPDPVPVQQQASVPFALPQTVSIASTVPQTTLSVASNTSRAATVLLGSPLTVNSSAGT
TQQITTQQFTTQQLTQIAQQLTPQQLAAITQQAGGQGGSKIVILKGPGGHAQVLQTVPGT
GSQAGKVTFARVLSGTQLRPGMQILSGGTVLNQASPGQGPVKVGTGIQRLVQSPNGPLKQ
VQLISMPQGQTQTVQMQIPQAQLAQSQQIQLQPQTQVQLQSTMQTQVTATATGTTSVRPQ
GVTLTTVPQQGEAKRITLVLQQPHGGTTQGGAVTVGGSGQLQQGQQQRLVLGNLPGKLVL
QGGQLAALTQARAGQTGAQPKVLTIQLQVQQQPNQQGGPKFQLVSGGQGSSPQVVQISQG
QGGQRLAMPLKLLLQPQMSSTSTAGGTVSVVKVINTSAAGSAPSTTTTMASTGIRLAKAQ
EPVRRVETLGKQEKANRIVAEAIARAKARGERNIPRVLNQDELPPGQKAADKGAAATTTG
TPGAKKKGGGGGSKKKSPPGAGGKGMACAEKKGKAKAAGGAAVGTPVGVAGTSGSKSKSK
AKINTITLVGGKKRKRNASSDHSDGDLSPASPSKALEEDMLAKRRSNRQVKRKKYTEDLD
IKITDDEDEPEEDVDVTTTAAVASITGGAAGQLMGEQLKQELQLDGDGLSSMQFFVENPN
EEDAAIVDKVLSMRLTKKEVSQGHYINAEEFFVKYKNYSYMHCEWATLEQLERDKRIHQK
LKRFKIKHAQMRLLLQEEEEPFNPDYVEVDRILDESNSVDKDNGEPVVYYLVKWCSLPYE
DATWELREDVDEDKVVEFRKIQDRQPQLKRTPRPQAAAWKKLEEFREYKSGNVLREYQLE
GVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVLGAGVQGPFLVIAPLSTITNWERE
FATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFEALITTFEMILSDCPEL
REISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPA
QFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQ
KKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAEESIVAELREVY
DPMVPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLY
ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQND
LQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNVNGQ
IQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITIESEGKGSTFSK
ASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRKQTRQFATLRGE
GGEISDPDSDDEYPPANSRQSRSSRRSERHTGNGYGRTDCFRVEKHLLVYGWGRWRDILS
HARCKRRLGEHDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPHTLLNHSGL
SIPVPRGRKGKRVKAQSSFDIQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRVRMLY
YLRQEVIGEHADSVLRGADARDIDIWMPEMEQQEVPSGWWDTEADRSLLVGVFKHGYEMY
TTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEFKPASRHTKDLY
EEADSMNMGDDICVDDKPGPVKTKEPPSGLSGACEWPTSSSLTARLRRLITAYQRSYKRE
QLKVEAAEKGDRKRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVERIKEPNA
QEGVDAKLEWARFRTFARLDKKTDESLSRYFRCFMAMCRRVCNLRPARGEDPSDLGQSMA
PITEERASRTLYRISLLRRLRERVLPHPSMEESLLLAPLSSELPVWWSTPAHDRELMLGA
ALHGVSRTELSVFSDPQFSFSQAHHDYLEIQQNQPAPASPLRQPQAEEGSAVKEEEGLNR
ESGLLGASEALGHSDTQTTPLSRPDGKGRDRTGLGWKKSRGRGPRSEGRKGGGSGEGGMS
DLDSDSDSGSSTSSRRSESSDDSVDSDAERERAALKMEEDGENSLLSMTPSQDGAPPESL
TDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYASDAQLNPGSDDLGAGDELSFARL
MRKGNSTPGGEGADGEESEFTVKLLKEEGLKLTFSKHALMSNGSGGEGSGRRKRRDQELS
DPDRAVPVVNAMTGTVLSGERAPRRRDMPNWLKENPEYEVEGDMLELLVNRSKRKKKRTE
KAVALSGSEKINIIDMRTGKKVGAAHGPMLQDLREFLEENPDTAVAPEWAETARCSGFLP
DSLFHRLLSAHSVIPKRDRHHSHHHAPQPDPLEDPLLGGGEEETLVSDGAYMMEDEDLED
SSFLTQAFDVKMEGGDSLSQGGYESSDREALLDDVIMPQKDSDSSSSSED
NT seq
7713 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgatgatacgccgctgttcaatctggatgctctg
ccaggcgatgccttcacccagggttcctcagaccctgtggaggaggctctgaaactggct
ctggggcagattgaccccccctatgaacccaccccagctctctgcacaccagtcgcagct
ccaataatcccagacccagtccctgtgcagcagcaggcctccgtcccatttgccctccct
cagactgtttcaatcgcttcaacagtacctcagacaacactctctgtagccagtaacact
agtcgggctgccacagtcctgctgggctcacctctgactgtcaatagttctgctggcacc
acacaacagatcacaacacaacaatttaccacacagcagctcacacagattgcacagcag
cttactcctcagcagctagctgccatcacccagcaggccggggggcagggaggctccaag
atcgtcatcctgaaaggacctggggggcatgcacaggtgctgcagactgttcctgggaca
ggctctcaagcggggaaggtcacctttgccagggtactgtctggaacccaacttaggcct
ggcatgcagatactgtctgggggaacggtcctgaaccaagcatctcctgggcaggggccg
gtgaaggtggggactgggatacagaggctagttcagtcgcccaatggacccctgaaacag
gtgcagttgatctccatgccccagggccagacgcaaactgtccagatgcaaataccgcag
gcccagcttgcccaatcgcagcaaatccagctacaaccccagacacaggtgcagctgcag
tctaccatgcaaacacaggttaccgccactgctacaggcaccacttcagtacgaccacaa
ggggttaccctcactacagtaccacagcagggtgaagctaagaggattaccctggtgctg
cagcagccccatggtggcacgacccaggggggtgctgtgacggtgggtggatcgggtcag
ctgcagcagggccagcagcagaggctggtgttgggtaacctcccagggaagctggtcctc
caagggggtcagctggctgctctcacccaggccagggcagggcagacgggggcgcagcct
aaagtacttaccattcagctgcaagtgcagcagcaacccaaccaacaggggggacccaag
tttcagctggtgtctggagggcaaggtagcagcccacaggtggttcagatctcccagggg
caaggtggacagagactggccatgcccctcaaactgctgctgcaaccacagatgagctcc
acctccacagcaggcggtaccgtctccgtagtgaaggtcatcaacacctcggctgctggc
tctgccccttccaccaccaccaccatggcatcaacagggatacggctagccaaggcccag
gagcctgtacggcgtgtggagaccctgggcaagcaggagaaggccaaccgcattgtggcc
gaggccattgccagagcaaaggcccggggagagaggaacattccacgagtcctcaaccag
gacgaactgcctcctggacagaaggctgctgacaaaggggccgctgcaacgaccactggc
acacctggagccaagaagaaggggggaggaggcgggagtaagaagaaaagcccaccaggg
gcgggggggaagggcatggcttgtgctgagaagaaaggcaaggccaaggcagcaggtgga
gctgctgtagggacacctgtaggggtggctggaaccagcggcagcaaaagcaaaagcaag
gcaaagatcaatacgatcactctagtggggggtaagaagaggaagaggaatgcatcctca
gaccactctgatggggacttgagccctgcctctccctctaaggccctggaggaggacatg
ttagcaaagaggcgctctaaccgccaggtgaagaggaagaagtacacggaggacttggac
atcaaaatcactgacgacgaggatgagccggaggaggacgtggacgtaaccacgacggca
gcggtggcgtccattaccggaggggccgcggggcagctgatgggagagcagctcaaacag
gagctgcagttggacggggatggcctttccagcatgcagttctttgtggaaaaccccaac
gaggaagatgcagcaattgtcgacaaagtcttgtccatgaggctaactaagaaggaggtg
tctcaaggacattatataaatgctgaggaattctttgtcaaatataagaactactcctat
atgcactgtgagtgggccactctggagcagctggagagagacaagaggatccaccagaag
ctgaagagattcaagatcaaacacgcacagatgagactcctcttacaggaggaggaggag
cccttcaacccagactatgtggaggtggaccggatcctggatgaatccaacagtgtggac
aaggacaatggagagccggtggtgtattacttggtgaagtggtgctctctgccctatgaa
gacgccacctgggagctgagggaggacgtggatgaggacaaggtggtggagtttaggaag
atccaggaccgccaacctcagctcaagagaacgccccgaccccaagcggctgcatggaag
aagctggaggaattcagagagtacaagagtgggaacgtacttcgagaataccagctagag
ggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctggccgatgag
atgggtctagggaagaccatccagtccatatctctgctgtctgaggtgcttggtgccggg
gtccaaggccccttcctggtcatcgcccccctctccaccatcaccaactgggagagggag
ttcgccacctggactgacatgaatgccatcgtctatcacggcagcctggccagcaggcag
atgatccagcagtacgagatgtactgcaaggacgacaaggaccatctgatcccaggggca
tataaatttgaagctctgatcacaacgtttgagatgattctgtccgactgccctgagctg
agggagatctcctggcgctgtgtgatcattgacgaagcccaccgcctcaagaaccgcaac
tgcaagctgctggacagcctcaagatgctggacctggagcataaggtgcttctgacaggc
actcccctccagaacacagtggaggagctcttcagtctgctgcactttcttgagccagct
cagttctcctcggagtccgagttcttacgtgactttggagacctcaaaacagaggagcag
gtccagaagctccaagctattctgaagcctatgatgctgcgcagactcaaagaggatgtg
gagaagaacttggcgccaaaacaggagaccatcattgaggtggagctgacagatgtgcag
aagaaatactaccgggccatcctagagaggaactttagtttcctcagcatgggggcaacc
agcaacagcaacgtccccaatctgctcaacaccatgatggagctgcgcaagtgctgcaac
cacccctacctcatcacaggggcggaggagtctattgtggctgagctgagggaggtgtac
gaccccatggtgccagacttccacctgcaggccctggtgagatctgcaggcaagctggtc
ctgctggacaaactgctgcctcgcctgaaggccgggggacacaaggtgctcatcttctcc
cagatggtgcgctgcctggacatcctggaggactacctcatcaacaagagatacctgtac
gagcgtattgatggcagagtgagagggaacctgcgtcaggcagccattgatcgcttcagc
aaaccagactcggaccgtttcgtcttcctgttgtgtacccgggctggaggcctgggcatc
aacctgactgctgctgacacctgcgtcatctttgactcagactggaaccctcagaatgat
ctgcaggctcaggcgcggtgtcaccgtatcggccagtccaaggcggtgaaggtgtaccgt
ctgatcaccaggaactcctatgagagggagatgttggacaaggctagcctcaaactgggt
ctggaccgggctgtactgcagagcatgagtggcaacaaggagagcaacgtcaacggacaa
atccagcagttctctaagaaggagatcgaggacctcctgaggaagggggcgtacgctgcc
atcatggacgaggaggacgagggctccaagttctgcgaggaggacattgaccagattctc
cagaggagagcaaccaccatcaccatcgagagcgagggcaagggctccaccttctcaaag
gccagcttcgtggccaccgaaaacaggaccgacatcgccctggacgaccccgagttctgg
cagaagtgggccaagagggcagacatagactttgattccatgaataggaagaacactctg
gtgattgacacacccagagtaaggaagcagacccgtcagttcgctaccctgaggggcgag
ggcggggagatctctgaccccgacagcgacgacgagtacccgcccgccaattcccggcag
tcccggtcctcaaggcgctccgagcgccacaccggaaatggctatggccgcaccgattgc
ttccgtgtggagaaacaccttcttgtttacgggtgggggcgctggcgggacatcctgtct
catgcacgctgtaagcggcgcctcggggagcatgacgtggagaccatctgcagggtcatc
ctggtcttctgcctgctgcattaccgtggcgacgagaacatcaagagtttcatctgggag
ctcatcacccccccagagaacggccgggaaccacacacactcctcaaccactctggtctg
tccatccctgttcctcggggtaggaaggggaagagggtgaaggcccagagctcgtttgac
attcagaaggtggagtggatccgcaagtacaaccccgactccctgcttctggacgacagc
taccgcaaacatctcaagcaccagtgcaacaaggtgttgctgagagtgcgtatgctgtac
tacctgaggcaggaagtcattggagaacacgccgactctgtgctgagaggagccgatgcc
agggatattgacatctggatgcctgagatggagcagcaggaggtgccatcaggctggtgg
gatacagaggcagaccgctccctcctcgtcggtgtcttcaaacacgggtatgagatgtac
accaccatgcgcgccgacgactgtctctgtttcctggagagagctggtcgccctgacgac
caggccattgatgcggagcagcactctgcagacgcagagctgggagacggaggagacgat
gacaagtattctgaagacccagagttcaagcctgcgtcaaggcacaccaaagacctgtac
gaggaggctgactccatgaacatgggtgacgatatctgtgtcgatgacaagccgggacct
gttaaaaccaaggaaccgccttctggcctgtcaggagcctgtgagtggccgaccagctcg
tcacttactgcgcggctccggcgtctgatcaccgcataccagcgcagctacaagagagag
cagctgaaggtggaggcagcagagaagggcgaccgcaagcgcaggaggtgtgagcaggcc
agtaagctgaaggagattgcacgccaggaacgccaacagaggtggacccgtagagaggag
tgtgatttctaccgtgtggtgtccacgttcggtgtcgagaggataaaagagccaaacgcc
caagagggggtggatgctaaactggaatgggcccgcttccggaccttcgcccgtctggac
aagaagacggacgagagtctgagtcgctacttccgctgtttcatggccatgtgccggagg
gtgtgcaacctgcggcccgcccgcggagaagacccgtcagatttggggcagtctatggcc
cccatcaccgaggagcgggcctctcgcaccctgtaccgcatcagtctgctgcgccgtctt
cgtgagcgtgtcctgccccacccctccatggaggagagcctgctgctggccccactcagc
tccgagcttcctgtctggtggagcactccggcccatgaccgggaactcatgctgggcgcc
gccctccacggcgttagccgcaccgagctttcagtcttctctgacccgcagttctccttc
agtcaagcccaccacgactacctcgagatccagcagaaccagcccgcccctgccagtccc
ctccgccaaccacaggcagaggagggctccgccgtcaaggaggaggagggactgaacagg
gagtccggcctccttggagcttctgaggctctcggccactctgatacacagaccacaccc
ctctctcgccctgatgggaagggacgtgatcgcaccggcttgggctggaagaagagcagg
gggaggggcccgagaagcgaaggaaggaaaggcggaggaagtggagaaggagggatgtct
gatttggattcagactctgattcaggctcgtctacctcttcccggcgatcagaaagctct
gacgacagtgtggacagcgacgcagagagggagagagctgctctgaagatggaggaagat
ggagagaacagcttgctctcaatgactccatctcaagatggcgcgccaccggagtccctc
actgaccccttcagggttgactggcccaaggaccgtgtgttgataaaccggctggacagc
ctctgtacactggtgctgtctgggcagtggccgacagggcggcgctacgcctctgacgcc
cagctcaacccaggctctgacgacctaggggcaggggatgagctcagctttgcacggctc
atgcggaaaggcaacagcacacccggtggagaaggagcagatggagaggaatctgagttc
acggtcaaactcctcaaggaggaggggctgaagctgaccttctctaagcatgccttgatg
tccaacgggtcagggggagaggggagcgggcgcaggaagcgtagggaccaagaattgtca
gatccagacagagcggtcccggtggtcaatgccatgacaggcacagtgctgagtggggag
cgggcccctcgacgcagggacatgcccaactggctgaaggagaacccagaatatgaggtg
gagggagacatgctggagctccttgtgaacagaagcaagaggaagaagaagaggaccgag
aaggcagtagcgctgtcgggcagtgagaagattaacataattgatatgaggacaggaaag
aaggttggggctgcgcatggacctatgctgcaggatctgagggagtttctggaggagaat
cctgacactgcagttgcaccagaatgggctgagactgcccggtgctctggctttctgcca
gacagcctcttccaccggcttctctccgcacactctgtcattcccaagagagaccgtcac
cacagccaccaccacgctccccagcctgacccgctggaggacccactcctgggcggaggt
gaagaagagaccctggtctcagacggggcctacatgatggaggacgaagacttggaggat
tcttctttcctgactcaagcctttgatgttaagatggaaggcggcgacagcttgtcacaa
ggcggatacgagagttctgacagggaggcccttttggacgacgtcattatgccgcagaag
gactcggactcttcctccagctcagaggattga
DBGET
integrated database retrieval system
