KEGG   Oncorhynchus keta (chum salmon): 118395315
Entry
118395315         CDS       T09424                                 
Symbol
primpol
Name
(RefSeq) DNA-directed primase/polymerase protein isoform X1
  KO
K22761  DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118395315 (primpol)
   03029 Mitochondrial biogenesis [BR:oke03029]
    118395315 (primpol)
Enzymes [BR:oke01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     118395315 (primpol)
    2.7.7.102  DNA primase AEP
     118395315 (primpol)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    118395315 (primpol)
Mitochondrial biogenesis [BR:oke03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    118395315 (primpol)
SSDB
Motif
Pfam: Herpes_UL52 DNA_primase_S
Other DBs
NCBI-GeneID: 118395315
NCBI-ProteinID: XP_035644924
LinkDB
Position
16:642275..664593
AA seq 548 aa
MNKGDWENRLKKVEELAQSFQQCPLTSCYKPRLSRPWQPSSIWKLFPRQCMAINFAQSCR
EDVHVFALEKEQAKMGQRIFLVTSYSELWHYYSTYRQSLMHCYEVIPEGAVCKLYFDLEF
HRPSNKGFDGKCMVASLIQYVCEKLEEVYGIECSGKDVLNLDSSTEEKFSRHLIFILPNA
AFKDNLHVGQFIHLILQPVLSVNRRGSELENDMCGVTEDSGKRGLIGSPQAKRPRQEERD
LSFLLVKNKDGHDGLFVDLGVYTKNRNFRLYKSSKVGKNVAFTVAEDNKFITKPKRNISI
EESLFQSSLISNVSFTGQKILTWDLHDERDGICPKPHAQLGSTSPCVSDSLGGYQCSPHK
EVDNFVLSVVKKDGIQGSIRRWNYFVSEQLLVYDILKYRWCQNVHRCHKSNNIMILVDLK
QEVWYQKCHDPACKSFRSSSYPLPQDICISYLITMDEEDQAYLMDDVGNIELSQTLLVEK
YLGGPAATLLQGEDRDPWGDDQAYLEALEDVERSTGDLAEDDVPDELLLQNMTEFESLKD
LCLSATKC
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgaacaaaggtgattgggaaaacagattgaagaaggtggaagaactagctcagtccttc
cagcagtgtcctttgacctcatgctacaaacctaggctgtcccggccatggcagccatcc
tccatatggaagctcttccctcgtcaatgtatggctatcaactttgcacagagttgcaga
gaggacgtacacgtgtttgcacttgagaaggaacaggcaaagatgggtcagaggatcttc
ctggtcaccagttacagtgagctatggcattactacagtacctacaggcaatctctgatg
cattgctatgaggtgatcccagagggggctgtttgcaagctatattttgacttggagttc
cacaggccctccaataagggctttgatgggaagtgcatggtggcctccctcatccagtat
gtgtgtgagaagctggaggaggtgtatgggattgagtgctctgggaaagatgttctgaac
cttgactccagcacagaggaaaaattcagtcgccatctcatcttcattttaccaaatgca
gcttttaaggataacctacatgtcgggcaatttatccatttgattctgcaaccagtgctg
agcgtgaataggaggggaagtgaacttgagaatgacatgtgtggagtcacagaggacagt
ggcaaaagggggctgattggaagtccacaggccaagaggcccagacaggaagagagggac
ctcagcttcctgttggtgaaaaacaaggacggacatgatgggctttttgttgacctcggt
gtgtacaccaagaacagaaacttccgtctctacaagtcatctaaggtggggaagaatgta
gccttcactgtcgcagaggacaacaagttcatcaccaagcctaaaaggaacatctctata
gaggagagcttgttccagtcctccttaatcagcaacgtaagtttcaccggtcagaagatt
ctgacatgggacctccatgacgagagggatgggatatgccccaagcctcatgctcagctg
ggttcgacttcaccctgtgtttcagactctttgggaggctaccagtgttctccccacaaa
gaagtggacaactttgttctttctgtggtgaaaaaggatggcatccaaggaagcatacga
cggtggaattactttgtttcagagcagttacttgtctacgacatcctaaagtaccgctgg
tgtcagaatgttcaccggtgccacaaaagcaacaacatcatgattctggtggatcttaaa
caggaggtctggtaccagaaatgtcatgaccctgcttgcaagagcttcagatcttctagt
tacccattaccacaggacatctgcatcagctacctcataacaatggatgaggaggaccag
gcatatctgatggacgacgtggggaacatcgagctcagccagacactcctagtggagaaa
tacttggggggcccggcagcaacacttctccagggagaagaccgcgatccctggggggat
gaccaggcttacctggaggccctggaggatgttgagagaagcacaggcgatttggcagag
gatgatgtcccagatgagcttctgcttcaaaacatgactgagtttgagtccctcaaagat
ttgtgcttgtcggccactaagtgctaa

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