Oncorhynchus keta (chum salmon): 118395428 Help Entry 118395428         CDS       T09424                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism oke  Oncorhynchus keta (chum salmon) Brite KEGG Orthology (KO) [BR:oke00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oke04515]     118395428 Cell adhesion molecules [BR:oke04515]  Cadherins   Cadherin related    118395428 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_pro RET_CLD1 LapA_dom CADH_Y-type_LIR He_PIG Motif Other DBs NCBI-GeneID:  118395428 NCBI-ProteinID:  XP_052377747 LinkDB All DBs Position 1:31831414..32033158 Genome browser AA seq 3308 aa AA seqDB search MKTEAKGLGRSVSRSLQDKGRWSRGVLLLAYIILELITVHSSTVLGNLELQLDEEQPAGT IVGDISAGLPPGVTANLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDHELRDRYNFIAV TMTGVTVEVTITVNDINDHAPTFPRRRAAFKIPEMTAVGTRFPLEPAVDGDKGQLTTQGY IIKDGNPGQAFLLETRRGSNQVLYLDLVVNTLLDSETTPSYTLSLEAFDGGSPKRTGQMV LDVTVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFASDIDQGDNGLVLYEINRRQSD PESYFVIDSRTGVITLNKPLDFEMRRVHELVVQARDNATQPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI IYLMCVDQILDREERDTYELRVMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQQYRQV IPEVVFPGSFVLQVTARDKDQGPNGDITYSLLQDGKAGQDENQAQWFTIDPVTGIITTLS QLDYESQPRPNVTVVATDGGRPSLSSTALVHVVLQDINDNEPVFGTNFYNVSIKENTAAG TCILEVTATDADGGSFGSISYSLGSGINSAVPSQFSVGKETGQICTNVALDRDQGPTSYD FTVTAVDGGGLNSVAYVRVDLLDINDNRPVFYPVSYAVSLSSQSAPGTSVVKVTALDPDT GENGRVTYRTVPRGNSPFFTLNKDTGVISLSRSLHGKANTVIPMVVSAQDGGGLAALVNA RVNISVVAGLVAPPVFEHSQYSFTVSENVLRGTEVGIVQAISKNGGPSKDILYTISSGDP AGYFTVDPESGALRTSLPLDHEAQPSLTLELQARSGSPPAFGQTHVHITIQDINDNAPVF MPSSSESLLLPEHTEIGTVVYRVQAKDRDSGLNGQMTFDLSSTATSIGGQRTFSMERSTG EIRLVGGLSYDVTPRYDLTVTAKDGGAPQLSSTMMLVVHVQAENDHGPVFDTLTYRVELR ENTPLSTRFLQVRALSLDTTGSGSSSPLAYYLRPDGDAAGFGIAADSGWLFVKSALDREV KDMYMLMVLATSGHGQLTKTGSATVRVSVTDENDNSPRLTQERAFLAVRENLPAGSGFGR VSAMDRDSGLNGRLSYRLLHSDRSFQINSHTGEISTRVGLDREQQSSYQVLLVVQDGGTP PRSATGTAFITVLDENDNTPSFRHSQPGRGLTMQVMEGQASGLLLGKVQAKDPDEGENGT VYYSMSGPRAERFSLNPTTGELHSSSPLSHSDRAEYSFTVTATDRGQPSHSATCSLHIQV LSASRAPSKANSLSIYLNSVEEAKPGSVIGSVKSHDSLELPEAGQVTYTVVGGSDRDGTF MVDRQTGDVYLARELDYERSARYTLQIEVDDFSMTLPSSHLVQLDIEVKDSNDHAPYFPE DPVTMVIPENMEPGASIYTFQASDQDGSGPNSLLTYSILHQYPDLPDILTLHPSTGVLTL AQELDHEVTSSLILVVQATDSALNDSQRRWGSVTARVFVTDENDNAPVFSSPSAVSVMED QPVGFVVLYVVARDADQGENRRVSYFIETGNAGGTFSLNPNTGSLSILKPIDREEQVLFN LTIVAQDHGVPALSSSQLLSVQVIDVNDQVPWFQEKQYQAQITENQPAGTTVLVVSASDL DQGTNGQVTYGGISDEGFSIHPATGVITTTKALDREAQEQYTLTVYARDGGMPPNFARAS VRIRMLDENDNAPTFSRLYYSLEVPENMEAVELFTLRATDLDTGDSGEMTYKITAGDPSG DFRVDRKSGVLSTSRPLDRERRARYSLTVTALDGGSPALSSTATVEVTLLDVNDHSPQFT SPSYIADLSEDAPIGSLVLEVSATDLDQGSNSQVLYFLLRGSQGMFIIDQHTGHVITAAP LDRERTASYTFDVCATDPSPASPRNSTATVNVYVQDVNDNAPFFIQDPLVINISASSVSS HRVLATMRAEDRDFGANGSVFYRFASPVRGFTINSLTGDIQATEKLQGLTQGQRTLIVEA MDQGSPAQSSLGVVVIYIREQTYRGIRFSRHARDVSLQENAAKGTAVVQTQAQYPDGSRS GISYSIFSGNTLLSFGISSSTGEIWVQSSMGLDYEESPRLRLVVKAETASSSSFMAVNLI LQDVNDNLPRFQLQNYVAYIREAQGYHFPIIQVVADDLDQGQNGQVTYSLRSSSLSGLFK IDSLTGSITTAAIMDREIWTQTKLVVTATDRGTPRLAGSATLTVIIVDLNDNSPTIPLPR EIRVPENTLVGSVITQVTGNDVDSGPALSYTLHLDLSSQGVFGIHRYGGGVSLTAPLDYE EKTWYTLTVRATDSKHQTEANLTILVEDVNDNAPTFTQDLYQMTLAEHSPAGSAVVTVTA TDRDSGENGRVTYRVMSSTRDIFYIDPSNGTLFITQQAEFDSENPSILVVIESRDMGTPA LSSIATVQVQVTDINDNAPVFHQSEYRSTVSEDGLPGATILTLEATDGDASRDNCGFDFT IASGNSGNAFQIESSVRFLEGRGFQTVGSVVLTGEGLDFEAVSSYNLTVVVSDRGVPQRS SAVSALISVTDTNDNPPAFSRAEYSVVLSEGTAAGTEVLSLSATDPDSSVVGKVQYLISS GDETGMFQVDRWTGALRLQRPLENERQGSHVIIVQASDGQGHYALAPVTVEVKDINDNRP YFPLPVLTASIRENQPHNTLVTMLHAIDQDTGVFGQLRYYMLDKTGEGKDAFLVNQTSGE VRTRFTFDFEKVNLFNFVALAMDAGNFSATVTVQVYVTGEDEYDPVFSDPEFSFLVPEGS KKGQSIGQVTARDEDEGVDGIVLYSLADPSPYFQVNASTGVVFLKMDSHVHHLSRSKREV RVMNLDLKAHSPLETSRVATARITVDVTHTSFGVASDMNLLLVSVIAVSLGAILILIFIA MALFCVRLRRQRKEQQSRCRPPASPGHGTMLHKLEETKVTGTDRSIYHQALPGYTSDQTG SGVGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQEHISARGPDSG IQQDADQLSDVSCEPNMDANQWFKAKKLASLSGTLLAGQVPVYREDGGGYLGVGRGLNIS HPKDYAFPVDGKPAVDGSLTAIVASDEELRGSYNWDYLLDWCPQFQPLASVFTEIARLKD ETAPPNPRRPLQHKAKVDPKPPRIDPPPLITSIAHPGAKTVPVKPAPVKPSVGRSSFPHL ASLRRSPISHEGSPSSVAMSPSFSPSLSPLAARSPAITPFGVTQGPSASMISTTEHSMEH SEEAEMRI NT seq 9927 nt NT seq  +upstreamnt  +downstreamnt atgaagaccgaggccaagggtttgggacggtctgtgtcgaggtcgctgcaggataagggc cggtggagccgaggggtcctgctgctggcctacatcatcctggagctgatcaccgtccac tcctccaccgtcctggggaacctggagctccagctggatgaggaacagccagccggaacc atcgtaggggacatcagcgctgggttaccgcctggtgtcaccgcaaatctttacttcatt tcagaccacgagggcactggggtggggagtgacctggacatagatgagagcacgggcatc atcaagacagccaaggtgttggaccatgagctgagggaccgatacaacttcattgcagtg acaatgacgggtgtgaccgttgaagtgaccatcacagtgaatgacatcaatgaccatgct cctacattcccccggaggagagcggcattcaaaatcccggaaatgacagcggtgggaacc aggttccccctagagccggcggtggacggggacaaaggccaactgactacccagggatac atcatcaaagatgggaaccccggccaggctttcctcctggagacccggagaggctccaac caggttctctatctggacctggtggtcaacactcttctggacagcgagaccacaccgtct tatacgctatccttggaggcgttcgatggaggctcccctaagaggactggtcagatggtg ctagatgtgacggttcaggatatcaacgacaacgctccagtcttcaaccagagtcgctac cacgccattatctcagagaatctgcagccgggtagcaacattctccaagtctttgcctct gacatcgaccaaggagacaacggtctggttctgtacgagatcaaccgcaggcagagcgac ccggagagctacttcgtcatcgactctcgtacgggtgtcatcacgctcaacaagcctctg gactttgagatgcggagggtccacgagcttgtggtccaggcgagggataacgccacgcag cccgaggttaccaacgccttcgtcacaatccacgtccgggactacaatgacaaccagccc accatgaccatcatcttcctcagcgaagacggctccccacagatctccgagggtgcccag cctggccagtatgtcgcccgcatctccgtcaccgacccagactacggagaatacgccaat gtcaatgtctccttggaaggaggggacgggaagtttgccctgaccaccaaagacaacata atctacctgatgtgtgtggaccagatcctagaccgagaggagagggacacatacgaactc agagtgatggctacagacgcaggcacccctcctctcagggctgagtcctcctttacgata caagtcactgacgtcaatgacaaccctcctctgtttgatcagcagcagtacagacaggtc atacctgaggtggtgttcccagggagcttcgtgttgcaggtcacggctagagacaaagac caggggcccaatggagacatcacatacagcctcctgcaggatggcaaggccggccaggat gagaaccaggcccagtggttcaccatagacccagtaacagggatcatcaccacactctcc cagctggattacgagtcgcagcccaggccgaatgtgacagtggtggctacagacggaggg aggccttccctgtcctccacagctctggtccatgtggtgctgcaggatattaatgacaac gaacctgtgttcggtaccaacttctacaatgtatcgatcaaggagaacacggccgctggg acctgcatcctagaggtgacagcgacagatgcggacggtggctccttcggctccatcagc tactctctggggtcaggcatcaacagtgctgtcccctcccagttctctgtagggaaggag acaggacagatctgtaccaacgtggctctggacagggatcagggaccaaccagctatgac tttaccgtcaccgccgtggacgggggcggtctgaactctgtggcctatgtcagggtggac ctgctggacatcaatgacaacagaccagtcttctaccctgtgagctacgccgtcagcctt agctcccagagtgcacctggcacttctgttgtcaaggttacggcccttgaccccgacact ggggagaacgggagggtcacgtaccgaaccgtccctaggggcaactctcccttcttcacc ctcaacaaagacacaggtgtgatctccctgtcccggtcgctgcacggcaaggccaacacg gtgatccccatggtggtttcagcccaggacggagggggtttggcagcactggtcaacgcc cgggtcaacattagtgtggtggcaggcctggtggcgccccctgtgttcgaacacagccag tacagcttcactgtatctgaaaacgtactgcgagggactgaggttggcatcgtacaggcc atcagtaagaacggcggccccagtaaggacatcctgtacaccatctcctctggagaccct gctggctacttcactgtggacccagagagtggtgccctgcggaccagccttcctctggac cacgaggcccagccctctctaaccctggagctccaggctcgtagcggcagcccccctgcc ttcggtcagacccacgtccacatcaccatccaggacatcaacgacaacgctcctgtcttc atgccctcctcttctgagtctctcctcctcccagagcacacagagatagggaccgtggtc tacagagtccaggccaaagaccgggactccggcctcaacggccagatgacctttgatctt tcctccaccgcgacctcaatcggaggtcaaagaaccttttccatggagcgcagcacaggg gagatccggctggttggcgggctgtcatacgacgtaacgccgcgttacgacctgacggtg acagctaaagatggcggcgcgccgcagctaagctctaccatgatgctggtggtgcacgtc caggcggagaacgaccacggtcccgtgttcgacaccctgacctaccgcgtggagctgagg gagaacacgccgctcagcacacgcttcctacaggtgcgagctctgagcctggacaccaca ggttcaggctcctcctctccactggcgtactacctgagacctgacggagacgcagcaggg tttggcattgcagcagacagcggctggctgtttgtgaagagcgccctggacagagaggtg aaggacatgtacatgttgatggttctggccacgtcgggccacgggcagctgacgaagacg ggcagtgccacggtgagggtgtccgtgaccgatgagaacgacaactcacctcgtttgaca caggagagggctttcctggccgtgagagagaaccttccggcggggtcagggttcggacgg gtttcggctatggatcgcgactcagggctcaacggcaggctcagttacagactcctacac tcagacagaagcttccagatcaactcacacacaggtgagatcagtacccgtgtaggtctg gacagggagcagcagagtagttaccaggtgttgttggtggtccaggatggaggtactccc ccgcgcagcgctacagggacagccttcatcaccgtcctggatgagaacgacaacactccc tccttcagacacagccagcctggcagaggacttaccatgcaggtgatggagggccaggca tcaggtctactgctggggaaagtacaggccaaggaccctgatgagggagagaacggcacg gtgtactactccatgtcaggtcccagagcagagcgtttctctctgaacccgactacaggt gaactgcattcctcctctcctctgagtcactctgacagagctgagtacagcttcactgtg actgccactgaccgaggccagccatctcacagcgctacctgttcactacacatacaggtc ctgagtgcgagcagagctccttccaaagccaactccctctccatatacttaaactccgtt gaggaggccaaaccgggctctgtgattggctctgtgaagtcacatgacagcttagagctc cctgaggctggtcaggtgacctatacggtggtgggcgggtcagaccgagacggaacgttc atggtggaccgtcagacaggtgacgtgtacctggcaagggagctggactacgagcgatct gcccgctacacactacagatagaggtggacgacttctccatgacattacccagcagccac ctggtgcagctggacatcgaggtgaaggacagcaacgaccacgcaccctacttcccggag gaccccgttaccatggtgatacctgagaacatggagcctggggcgtccatctacaccttc caggcctcagaccaggatggatcaggacccaacagcctgctgacctactccatcctgcac cagtaccctgacctccctgacatcctgacccttcacccttccactggcgtcctgaccctg gcgcaggaactggaccatgaggttacttcctccctcatcctggtcgtacaggcgacagac tccgccctgaacgacagccagcggcgctggggctccgtgacagcaagggtgtttgtgaca gacgagaacgacaacgctccagtgtttagctcgccttctgcggtcagtgtcatggaggac cagcctgtgggcttcgtggttctctacgttgtggcgcgagatgccgaccagggggagaac agacgggtcagctacttcatcgagactggcaatgctggagggacgttcagcctcaaccct aatactggttctctgtctatcctgaagcccatcgaccgggaggagcaggtcctgttcaac ctgaccatcgtagcccaggaccacggggtaccagcgctctcatccagccagctgctgtct gtccaggtcatcgacgtgaacgaccaggtgccctggttccaggagaagcagtaccaagcc cagattacagagaaccagcctgcaggaaccactgttctggtggtgtcagcctccgacctg gaccaaggtaccaatggccaggtgacatatggaggcatctctgatgagggtttcagcatt cacccagctacaggtgttataaccaccactaaagccctggacagagaggcacaggaacaa tacacactgacagtgtatgcccgagacggtggcatgcctcctaactttgcccgggcgtca gtgaggatccggatgttggatgagaatgacaacgccccaacgttcagtagactgtactac agtctggaggtgcctgagaacatggaggctgttgagctgttcaccctcagagctacggac ctggacactggagacagcggagagatgacctacaagatcacagcaggcgacccatcaggt gacttccgtgtggacaggaagtcaggtgttctctccacctccagaccgctggacagggaa cgtagggccaggtacagtctgacagtgacagcccttgacgggggctctccggccctgagc agcacggccactgtagaggtcactctcctggacgtcaacgaccacagcccccagttcacc agccccagctacatcgctgacctctctgaggatgctcctattggctccctggtgctggag gtctctgctactgacctggaccaagggtctaacagccaggtgctgtacttcctgttgcgc ggttcccagggcatgttcatcattgaccagcacacgggacatgtcatcaccgccgcgccg ctcgaccgggagcgaaccgcgtcgtacactttcgatgtctgtgccacagacccgtccccc gccagcccacgcaactccaccgccacggtcaatgtgtatgtacaggacgtgaacgacaac gctccattcttcatccaggatcccctggttatcaacatctctgcctccagtgtctcctcc caccgcgtcctggccaccatgcgggcggaggaccgtgactttggggccaacggctcagtg ttctaccgcttcgccagccctgtccggggcttcaccattaactctctgaccggggacata caggctacagagaagctgcagggactgacccagggccagaggactctgattgtagaggct atggaccagggcagcccagcccagtcctctctaggggtggtggtcatctacatcagagaa cagacctacagggggatccgcttctcacgccacgctagagatgtcagtctgcaggagaac gctgccaaaggtaccgccgtggtgcagactcaggcccagtaccctgatggatcccgtagt gggatcagttacagcatcttcagtggcaacaccctactctcctttggaatcagctcttcc actggtgagatctgggtacagagctccatggggctggattatgaggagtcccctagactc cgcctagtggtgaaggctgaaactgcatcctccagttccttcatggcggtcaacctgatc cttcaggacgtcaatgacaacctgccgcgcttccagctgcagaactatgtagcctacata cgagaggcacagggatatcattttcctatcatacaggtggtggctgatgaccttgaccag ggccagaatggtcaggtgacctatagcctgaggtcgtcgtctctcagcggcctgttcaag atcgactcgctgaccggaagcatcaccaccgccgctatcatggaccgagagatctggaca caaaccaagctggttgttacggcgacggaccggggcacaccacgattggccggctcggcg accctcacggtgatcatcgtggacctcaacgacaacagtcctacaatccctctgccgcgt gagatcagagtaccagagaacactctggttggctcggtaataacccaggtgacaggaaat gacgtggactcaggccccgccctgtcctacaccctccacctggacctgtcttcccagggc gtatttgggatccaccgctacgggggcggggtgtctctgaccgcccctctggactacgag gagaagacctggtacacgctgactgtcagggctactgactccaaacaccagactgaagct aacctcaccatactggtggaggatgtcaatgataatgctcctacgttcacacaggatctt taccagatgactctggcagagcactccccagctggcagtgcagttgtcactgtgacagcc acggaccgcgattctggggagaacggccgcgtcacctacagagtgatgtcatcaacccgg gatatcttctacatcgaccccagcaatggtaccctgttcatcacccagcaggcagagttt gactctgaaaacccttctatcctggtggtaatagagtccagagacatgggaacaccagcc ctctcctccatcgctactgtacaggtccaggtgactgacatcaatgacaacgcgcccgtc ttccaccaatcagagtacagatccacggtgtcggaggacggccttccgggcgccaccatc ctgaccctagaggcgaccgacggcgacgcgtcacgcgacaactgcggcttcgacttcacc atagccagcggaaactcaggcaatgccttccaaatcgagagcagcgtacgcttcctggaa ggacgaggcttccagacggtaggcagcgtggtattgactggtgagggcctggacttcgag gctgtgtccagttacaacctgaccgtggtcgtgtcggaccgtggcgtgccccagaggagc tcggctgtctctgcgctgatcagtgtgacagatactaacgacaaccctccggcgttcagc agggcagagtacagtgtggtgctgagtgaaggaacagccgcagggactgaagtcctcagc ctgtctgcaacagacccagactcctcggtagtagggaaggtgcagtacctgatcagctct ggggatgagacgggtatgttccaggtagaccgctggaccggagccctgaggctgcagaga ccactggaaaatgagagacagggatcccatgtgatcattgtgcaggcgtcagatggacag ggtcactatgcgctggctccagtcactgtggaggtgaaggacattaatgacaacagacct tacttccccctgcctgtcctcaccgccagcatcagagagaaccagcctcacaacaccctt gtcaccatgctgcacgccatcgaccaggacacaggagtctttggacagctgagatactac atgttggacaagactggagaggggaaagacgccttcctggtcaaccagacgtcaggcgag gtccggactcgcttcaccttcgactttgagaaagtcaacttgttcaactttgtagctctg gccatggacgcagggaacttctctgccacggtgaccgtccaggtgtacgtgacaggggag gatgagtacgaccctgtgttctccgacccagagttctccttcttagttcctgaggggtcg aagaagggccagagcattggtcaggtgacagccagagacgaggacgagggagtagacggg attgttctgtactccctagctgacccctcgccctacttccaggtcaatgcatcgacgggc gtggttttcctgaagatggacagccacgtccatcatctgagcaggtccaagagggaggtc cgtgtgatgaaccttgacctgaaggcccacagccctctggagacatcccgtgtggccacc gctcgcatcaccgttgacgtaacacacacctcctttggcgtggcatcggacatgaacctg ctgctggtcagtgtgatcgctgtgtccctgggagccatcctcatcctcatcttcatcgcc atggctctgttctgtgtgagactgagacgtcagaggaaggagcagcagagtcgctgcaga cctccagcctctcccggccacggcacgatgctgcacaaactagaggagactaaagtcact ggcaccgaccggagcatctaccaccaggccttaccagggtacacttctgaccaaactggg agtggtgtgggagggccatacccccgcgggggctccctggacccatcccactccagcggg cgtggctcggcagaggcggcagaagacgatgagatccggatgatcaacgagtacccccgt gtctcctccatctcttcgtccatgcaggaacacatctcagcccgcgggccagactctggt atccagcaggacgctgatcagctgtctgacgtctcctgtgagcccaacatggacgccaac cagtggttcaaggccaagaagctggccagtctcagtgggactctgctggctggccaggtg cctgtctacagggaggatggtggaggttatctgggggtagggagggggctgaacatctcc caccctaaagactatgccttcccagtggatggtaaacccgctgtggacggctccctcaca gccatagtggccagtgacgaggagctgaggggtagttataactgggactacctgctggac tggtgcccacagttccagccattagcaagcgtcttcacggagatagcgaggttaaaggat gagacggcccctcctaaccctcgcagaccactccagcacaaagccaaggtggaccccaaa ccccctcgcattgaccccccgcccctaatcacctccatagcccaccccggggcgaagaca gtcccggtcaagcctgcccccgttaagccctctgtggggaggtcctccttcccccatctg gcctccctacggaggtcccccatcagtcacgagggctccccctcctcagtagccatgtcc cccagcttctccccctccctgtcccccctggccgcccgctccccggccatcacacctttc ggcgtcacccagggcccctcagcctccatgatcagcaccactgaacacagcatggagcac agtgaagaggccgagatgaggatatag

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