Oncorhynchus keta (chum salmon): 118395536
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Entry
118395536 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118395536
03036 Chromosome and associated proteins [BR:
oke03036
]
118395536
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
118395536
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
118395536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
118395536
NCBI-ProteinID:
XP_052320564
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All DBs
Position
16:7770701..7793031
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AA seq
704 aa
AA seq
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MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTTKFSGPLLS
FEVSDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDTATTEEGPE
PVEVFRDRVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPY
TTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMTEDHRGE
TSWGKHSHKNMSGLHTQMVGTVMKALVNKKITVTGNFLGHSGTQCITCSYKASSGLLYPL
ERGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREEYGRLF
DFVTAKKLSIKNRGFKEGIKGKDDMLEDSDEDQHDAYLERMKEEGKIREEANDSDDSDGE
SDESFNPGEEEDDIAEEYDSKASASDSSAEGGDSDREKKKRPAKKAKVVKERKPRKKKPK
DSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKVEWDGKAEE
AKKDYEVAMREYRESGGGSSAPSKKERKKKGGKSDEKKKKGTSGGGRERERERTGNDSFK
SREFISSEESSSESDRGKGKRKRKGSDELEEVASTPPSSDSGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgtctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagctgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccggacacatctacaaatatgacggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgagcgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaacgatgaggcagaggtgtcgctg
atggaggtccgcttctatgtcccgcccggggacactgccaccacggaagaggggccagaa
cctgtggaggtgtttagagaccgtgtgctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatcttcaaagagctgcagtgtctcacgcccaggggcaggtatgatatc
cgtatctacccgagcttcctccacctccacggtaagacatttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctggacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggatcaccgtggagaa
acttcctgggggaaacactcacacaagaacatgtcaggtttacacacacagatggtcggc
acggtgatgaaggctctggtcaacaagaagatcaccgtgacaggaaacttcctgggtcac
tcggggacccagtgtataacgtgttcctacaaagcatcgtcaggcctgctctatcctctg
gagaggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcg
tgtgtgaacttcgctagaggcaccaccaccacgcgctccttcgactttgagatcgaaacc
aagcagggcacccagttcaccttcagcagcattgagagagaggagtatgggagacttttt
gactttgtgacggccaagaagctcagcatcaagaacagaggattcaaagagggtataaag
ggtaaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggagagg
atgaaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatggagag
agcgatgagtcttttaaccctggagaggaggaggatgacatagcggaagagtatgacagt
aaggcatcagccagtgacagcagtgcagaggggggagacagtgacagagaaaagaagaag
agaccagccaagaaggccaaagtggtgaaggagaggaaaccacgcaagaagaagccgaag
gacagtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagccgc
gagagcatcaaagcagagcaccctgggatatccatcacagagatctccaagagggccggg
gagatgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggaggag
gcgaagaaggactatgaggtagcgatgagggagtacagagagagtggaggaggatcctct
gccccctccaaaaaggagaggaaaaagaagggagggaagagtgatgagaagaagaagaag
gggacgtctggtggagggagggagcgagagagggagaggacaggaaacgacagctttaag
agcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaagggcaaa
cgcaaacgcaagggttcagatgaactagaggaggtggcctcgaccccacccagttctgac
tcaggatcagactga
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integrated database retrieval system
