Oncorhynchus keta (chum salmon): 118395541
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Entry
118395541 CDS
T09424
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118395541
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118395541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118395541
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118395541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
118395541
NCBI-ProteinID:
XP_052320631
LinkDB
All DBs
Position
16:complement(8229453..8274496)
Genome browser
AA seq
2280 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTLQLVIEIIWPLFIFFILISVRTHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGETPGLVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKVLVRALRKLQGNTAGFKLKDFLRDKETLSSFLHRNASLSHHAVQQIVEADLNLE
KVLIGGFGVHLRDMCNTTSLEEFVTISDKNVSRLTQDIICKASPDWLNKAQDHFLSNLDF
LKPIRKDVKSDPEVVQKVSAATDGLLESLGALAVELASMKSWKEMRNEIHYLTVNATGSP
SHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGGNGSDDQPVSAYDNTSTPY
CNSMMRSLEASPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEMNKTFQELGILRDLGG
MWEEMRPKVWTFMESSDEMHLVRTLLQNNASARFFNDRLAGTEWKAEDVARFLTKTAEDK
RPAGSAYTWREVFNETDDAIRTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAG
IVFPDIARSNSSDLPGNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDVIEQGIIRAVTGSKEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAL
IIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISASLLVVILKMGNLLPYSD
PCVVFLFLASFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSICLMLFDSFL
YGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKQGKNIQERKEGNAEAVCIEEEPSHI
EPGVYIKNLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAETEQI
VNDIGLPHKRQCRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFD
LTLSSCRNSSSSSSVSYSKKVGLPQPQPQALTVLKGDSVSESSSDAGLGSEPESEATTID
VTMISNVIFKHVPAARLVEDLGHELTYVLPYEAAKGGAFVELFHEIDDRLSDLGISSYGI
SDTTLEEIFLKVAEDSGVDAAELPNSDGTIPARRHRRHAFGDHQSCLKPFTEDDAFDFND
SEESRETDWLGGSDGKGSYQVKGWRLIRQQFVALIWKRFLYARRSRKGFFAQIVLPAVFV
CIALVFSLIVPPFGKYPSLELEPGMYEEQFTFISNDAPEDADTNKLLGALTNYDDFGSLC
NSPHAPCNTLDEEWAIPEVPESVRDIFMNGNWSMENPSPLCECSCEGRKKMLPECPAGAG
GLPPPQVKISDQGTLQNLTGRNISDYLVKTYAQIIGKSLKNKISVNEFRYGGFSLGARNT
QLLPPGDDIDQAISEIRRRFHLERGTASDRFLASLSSFIQGLDTKNNVKIWFNNKGWHSI
GSFLNVMNNGILRANLPAGQDSSKYGIRAFNHPLNLTKEQLSQVALMTTSVDVLVSICVI
FAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLSNFIWDMCNYIVPATLVIIIFI
CFQQDAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGS
VSTFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRS
PLAWDMVGKNLFAMAVQGVVFFTITVLIQYRFCIKARSLRTDQKPIGEEDEDVARERQRI
MGGGGQSDILELKQLTKVYNRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGD
SIVTSGEAYLAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVC
EVAEWGIRKLGLIKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRA
LWNCILSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTII
LRVAGPDPDLRPVMEFIEKELPGSTLKEKHRNMLQYQLSSSKTSLARIFSILAKNKEWLH
IEDYSVSQTTLDQVFVNFAKDQSDEDHLKDISVHKREAVAVDITQLKSFLTDEKARESCV
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctctactcaactgggcttactgctgtggaagaacttcacctacagacggaga
cagacactccagctagttatcgagataatatggccgctcttcatcttcttcatcctcata
tctgtgaggacgcattacccgccctacgagcaacatgagtgccatttccccaacaaggcc
atgccctcggcgggcaccttgccctgggtacaagggatcatctgcaacgccaacaacccc
tgcttccgccaccccacaccaggagagaccccagggctggtgggcaacttcaacgattct
ataatctcccgtctgttcatcgatgccaagaagatcctcctctacagccagaatgacaag
agcttcgagggctacaaagttctggtgcgggctctgaggaaactacagggcaacacggca
ggtttcaagctgaaggactttctccgcgataaggagaccttgtcgtcgttcctgcatcgc
aacgcctccctatcccatcacgccgtccagcagattgtggaggctgacctcaatctagag
aaggtcctgattggaggtttcggcgtccatcttagagatatgtgtaacaccacttctctg
gaggagtttgtgaccatctccgacaagaatgtgtcacggctcactcaagacatcatctgc
aaggcctcccctgattggctgaacaaggcccaggaccacttcctgtccaacctggacttc
ctaaagcccatacggaaggacgtgaagtccgaccctgaggtcgtccagaaggtatccgcg
gcaaccgacggtctgctagagagcttgggagcgctggctgtagagctggccagtatgaag
agttggaaggagatgcgtaacgagatccattacctgacggtcaacgccacgggctccccc
agccacatgtaccaggccgtgtcccgtatcgtctgtggccaccccgagggcggcggactg
aagatcaagtcgctcaactggtacgaggacaacaactacaaggccctgttcggtaaccac
ggcggcaacggcagcgacgaccaacccgtgtccgcctacgacaacacctcaactccgtac
tgtaacagcatgatgaggagtctggaagccagccccgtctccaggatgatctggagggct
ctgaagcctctcctcatgggaaagatcctctacacccctgacactcctgccacacagagg
atcatacacgagatgaacaagacgttccaggagctgggtatcctgagggacctgggtggg
atgtgggaggagatgaggcctaaagtctggaccttcatggagagcagtgatgagatgcac
ctggttcggacgctgcttcagaacaacgccagcgcccgcttcttcaacgaccgcctggct
ggcacagagtggaaggcggaggacgtggcccgcttcctgaccaagactgccgaggacaaa
cgccccgccggctcggcctacacctggagagaggtgttcaacgagaccgacgacgctatc
aggaccatctcccgctttatggagtgtgtgaacctggataaactagagccagtggccaat
gaggaaagactggtcaacaaatccatgggtctcctagacaaccagaagttctgggctggg
atagtgttcccagacatcgcccgtagcaacagttctgacctgccgggtaacgtcaactac
aagatccgcatggacatcgacaatgtggagcgcaccaacaagatcaaggacggttactgg
gaccctggtcctcgggccgacccctttgaggacctgcgctacatctggggcggtttctcc
tacctgcaggacgttatagaacagggcatcatcagggcggtgacaggcagtaaggagaag
actggagtctacatccaacagatgccttacccctgttacgtggacgatatgttcctgcgg
gtgatgagtcgctccatgcctctcttcatgaccctggcctggatgtactctgtggccctc
atcatcaagggcgtggtctatgagaaggaggcgcggctcaaagagaccatgaggatcatg
ggattggacaacggcatcctgtggctcagctggttcatcagcagcctcattcccctgctc
atctccgcctcgctgctggtagtcatactcaagatggggaacctgcttccctacagcgac
ccttgcgttgtcttcctgttcctggcttccttcgctgtggtaaccatcatgcagtgcttc
ctgatcagtaccatcttctcccgtgccaacctggcggcggcctgcggaggaatcatctac
ttcaccctctacctgccctacgtcctctgtgtggcctggcaggactacgtgggtttcggg
gctaaagtcattgtgagcctgttgtccccagtggcgtttgggttcggctgtgagtacttt
gccctgtttgaggagcagggagtgggaatccagtggtccaacctgttgtccagccccttg
gaggaggacagctactccctcaccacctccatctgtctcatgctgtttgactccttcctc
tacggggtcatgacctggtacatcgaggctgtcttccctggccagtatgggatccccaga
ccctggtacttccccttcaccaagtcctactggtgtggagagaaacaagggaagaatata
caagaaagaaaggaaggaaatgcagaagctgtgtgcatcgaagaggagccgtctcacatc
gagcctggtgtttacatcaagaacctagtgaaggtatatagccatggcaacaagctggct
gtggacgggttgaccctgggtttctacgaggggcagatcacctccttcctggggcacaac
ggagccggcaagaccaccaccatgtccatcctgacgggtctgttcccgcccacctctggc
accgcctacatcctgggcaaggacatccgctcggagctcagcgccatcagacagaacctg
ggcgtctgcccgcagcacaacgttctcttcagcatgctgacggtggaggagcacatctgg
ttctatgcccgtctgaagggtctgtctgaggagaaggtgaaggctgagacggagcagatc
gtcaacgacatcggcctgcctcacaaacgccagtgtcgtagcaacacgctgtccgggggc
atgcagaggaaactgtcagtggcgttggcgttcgttggagggtcaaaggtcgtgatcctg
gatgaacccactgctggagtcgacccctacgcacgccggggcatttgggacctgcttctg
aagtatcgtgcaggccgcaccatcatcctctcaactcaccacatggacgaggcggacatc
ttgggcgaccgcatcgccatcatctcccacggcaagctgtgctgcgtgggctcctccctg
ttcctgaagacccagctggggacgggctactacctgaccctggtgaagagagacttcgac
ctgaccctcagctcctgtaggaactcctccagcagcagctctgtctcctacagcaagaag
gtgggcctccctcagccgcaacctcaggccctcacagtcctaaagggggacagtgtttct
gagagcagctctgatgctggactgggtagtgaacctgagagtgaagccaccactattgac
gtaaccatgatctccaatgtgatcttcaagcacgtccccgctgccaggctggttgaggac
ctgggccatgaactcacctacgttctgccctacgaggcggccaaaggtggagccttcgtg
gagctcttccacgaaatcgacgaccgcctgtctgacctcggcatctccagctacggcatc
tcagacaccaccctggaagagattttcctgaaagtagcagaggacagtggagtggacgct
gctgaacttcccaactctgatggcaccatcccggctcgtaggcaccgcagacacgcgttc
ggagaccaccagagctgcctgaaacccttcaccgaggacgacgctttcgacttcaacgac
tcagaagaatctcgtgagacggactggctgggaggctcggatggtaaaggctcgtatcag
gtcaaaggctggcgtctgattagacagcagtttgtggcgttgatatggaaacgcttcctg
tatgcccggcgctccaggaaaggcttcttcgctcagatcgtgcttcctgctgtgtttgtg
tgcatcgccctcgtcttcagtctcatcgtccctccgtttggaaagtaccccagcctggag
ctggagcctggcatgtatgaagaacagttcaccttcatcagcaacgacgcccctgaggat
gcagacactaacaagctgctgggtgccttgacaaactacgatgactttggttcactctgt
aactcacctcacgctccttgtaacacgttggatgaggagtgggccattcctgaggtaccg
gagagtgtgagggacatctttatgaatggcaactggagtatggaaaacccctctcctctg
tgtgagtgcagctgtgaaggacgcaagaagatgctacctgaatgcccagcgggagctggt
ggtcttcctcctccacaggtgaaaatcagtgaccaaggtaccctgcaaaatctgactggc
agaaatatctcagattacctggtcaaaacctatgctcagattatcgggaaaagtttgaag
aacaaaatctcggtcaatgaattcagatatggtggattctcattgggcgcaaggaacact
cagctcctcccaccaggtgatgatattgatcaggccatctctgagatcagacgacgcttc
cacctggaaagaggcactgcttctgaccgtttccttgccagcttatccagttttatccag
ggactggacactaagaacaacgtcaagatctggttcaacaacaaggggtggcacagcatc
gggtctttcctgaacgtgatgaacaacggaatcctgcgcgccaacctgcccgccggccag
gactccagcaagtacggcatccgtgccttcaaccacccactcaacctcaccaaggagcaa
ctgtcccaggtcgcactgatgaccacctctgtggacgtgctggtgtccatctgcgtgatc
ttcgccatgtctttcgtcccggccagcttcgtagtcttcctcattcaggagagagtcaac
aaggccaaacacatgcagttcatcagtggggtgcagcccttcctctattggctgtccaac
ttcatctgggacatgtgtaactacatcgtccctgctactctggtcattatcatcttcatc
tgcttccaacaagacgcctacgtctcctccaccaacctgcctgtactggctctgctgctg
ctgctctatgggtggtccatcacgcccctgatgtacccggcgtccttcttctttaagatc
cccagcacggcctacgtggtgctcacctccgtcaacatcctcatcggcatcaacggcagc
gtctccaccttcgtcctcgagctcttcggcagcaacgagatcggagggatcaatgacatc
ctgaagaacgtgttcctgatcttccctcacttctgtctgggccgaggcctcatcgacatg
gtgaagaaccaggccatggccgacgctctggagaggtttggtgagaaccggttccgttcc
cctctggcgtgggacatggtgggcaagaatctgttcgccatggctgtgcagggcgtggtc
ttcttcactatcaccgtgctcatccaataccgcttctgtatcaaggccagatctttgcgc
accgaccagaaacctatcggtgaggaggatgaagacgtggccagagagaggcaaaggatt
atgggaggagggggacagtctgacattctggaactcaagcagctgaccaaggtgtacaat
agaaaacagaaaccagcagtggatcgtctttgtgtgggaattcctccaggagagtgtttt
ggtctgcttggggtcaacggagcaggaaagacgagcaccttcaagatgctgactggagac
tcaatagtcacgagtggagaagcttacctggcgggaaagagtgtgttgacggagataaac
gaggtgcaccagaacatgggctactgccctcagtttgatgctatcaatgacctgctgact
ggcagggagcaccttgagttctacgccatcctgaggggggttcccgagaaggaagtgtgt
gaggtggcagagtggggcatccgtaaactaggcctgatcaagtatgtggacaaggcagca
gggagctacagtggagggaacatgaggaaactctccacggccatggcactgatcggtggt
ccccccgtggtcttcctggacgagcccaccactggtatggaccccaaggccagacgggct
ctgtggaactgcattctcagtatcgtcaaggaggggcgatcagtggttctcacctcgcac
agtatggaggagtgtgaggccctgtgtacgcggatggccatcatggtcaatgggaggttc
cgctgcctgggcagcgtacagcacttaaagaacagatttggggatggctacaccatcatc
ctccgggtggcaggaccagacccggacctgaggccggtgatggagtttattgagaaggag
cttccaggcagcactctgaaggagaagcacaggaacatgctgcagtatcagctgtcctcc
tccaaaacctccctggcacgcatcttcagcatcctggccaagaacaaggagtggctgcac
attgaggactactccgtttcccagacaacactagaccaagtgtttgtcaatttcgccaag
gaccaaagtgacgaggaccacttaaaagacatttccgtgcacaagcgagaggcggtggca
gtggacattactcagctcaagtctttcctcaccgacgagaaggccagggagagctgtgtg
tga
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integrated database retrieval system
