KEGG   Oncorhynchus keta (chum salmon): 118395745
Entry
118395745         CDS       T09424                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04620  Toll-like receptor signaling pathway
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke04623  Cytosolic DNA-sensing pathway
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118395745 (irf7)
   04621 NOD-like receptor signaling pathway
    118395745 (irf7)
   04622 RIG-I-like receptor signaling pathway
    118395745 (irf7)
   04623 Cytosolic DNA-sensing pathway
    118395745 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118395745 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oke03000]
    118395745 (irf7)
Transcription factors [BR:oke03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    118395745 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 118395745
NCBI-ProteinID: XP_035645527
LinkDB
Position
17:complement(33276800..33281764)
AA seq 454 aa
MTGVRGSALKMQSRNPKPQFADWLIEQVWTGQYAGLCFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTIDLNQHTEEWAETY
IHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPVQQPYVHVNQDALLNLPAAQPSLY
DLEITISYRRREMLKTQVSGPMVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNCIL
GSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMTE
LIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEMAQGEGASSLQ
NDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgacaggagtacgtggctcagcattaaagatgcaaagtcgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtgttttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgttgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgatccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggactatgacattgac
atccacagctctctcacctctacaggctacacccccccaggcatggagcatgataatcta
ctcaagcttgtgaacaccatagacctgaaccaacatactgaggagtgggcagagacctat
atacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaacagag
ccccagccagtctcccagaaccactcaccaccaccagtcccagtaccagtacagcagcca
tacgtccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctctat
gacctggagatcaccatctcctacaggaggagagagatgttgaagacccaggtgtcaggc
cccatggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctctgc
ttccccagcactgacggcctgctagaccacaaacagattgaatacaccaactgcatccta
gggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttaccgg
caggacaaatgccatgtgttctctagtactagtgaccccagagaggcacaccctgaaccc
aggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgactgag
ctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgcttt
ggcgagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtggtt
cccttgatctgtcgtcacttccacgagatggcccagggggagggggcatcttccctccag
aacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagtgcc
acctggcccgacggcccagagcacaccatggggcaatacttctag

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