Oncorhynchus keta (chum salmon): 118395745
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Entry
118395745 CDS
T09424
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04620
Toll-like receptor signaling pathway
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke04623
Cytosolic DNA-sensing pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118395745 (irf7)
04621 NOD-like receptor signaling pathway
118395745 (irf7)
04622 RIG-I-like receptor signaling pathway
118395745 (irf7)
04623 Cytosolic DNA-sensing pathway
118395745 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118395745 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118395745 (irf7)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118395745 (irf7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
118395745
NCBI-ProteinID:
XP_035645527
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All DBs
Position
17:complement(33276800..33281764)
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AA seq
454 aa
AA seq
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MTGVRGSALKMQSRNPKPQFADWLIEQVWTGQYAGLCFVDNNKFRVPWKHISRKDCCEDD
SKIFRAWAVVSGKINTHPNDKAKWKTNFRCVLNNLTKRFMMVEDHSKDSDDPHKVYLIIN
NESNYGSPHIEEIAVDYDIDIHSSLTSTGYTPPGMEHDNLLKLVNTIDLNQHTEEWAETY
IHTHHPVVPEDCYPFQPLTEPQPVSQNHSPPPVPVPVQQPYVHVNQDALLNLPAAQPSLY
DLEITISYRRREMLKTQVSGPMVQLHYQCDVPEPNAQTLCFPSTDGLLDHKQIEYTNCIL
GSVQRGLLLEVRNTGIYGYRQDKCHVFSSTSDPREAHPEPRKMPQNEMVQLLSFDKYMTE
LIAFKENRGGSPDYTIHMCFGEKFPDGKPLEKKLIIVKVVPLICRHFHEMAQGEGASSLQ
NDNISLQISHHNSLMELISATWPDGPEHTMGQYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagtacgtggctcagcattaaagatgcaaagtcgcaaccccaaacctcagttt
gcggactggctgatagaacaggtgtggaccgggcaatacgccgggttgtgttttgtggac
aacaacaagttcagagtcccgtggaaacacatctctaggaaggactgttgcgaggacgac
agtaaaatattcagggcatgggcagtggtcagtggtaaaatcaacacgcatcccaatgac
aaggcaaagtggaagactaacttccgctgtgtactgaacaacctgaccaagcgtttcatg
atggtggaagaccactccaaggactcagacgatccccataaagtctacctgattatcaac
aatgagtctaactatgggagcccacacatagaggaaattgctgtggactatgacattgac
atccacagctctctcacctctacaggctacacccccccaggcatggagcatgataatcta
ctcaagcttgtgaacaccatagacctgaaccaacatactgaggagtgggcagagacctat
atacacacacaccacccagtggtaccagaagactgctaccccttccagcctctaacagag
ccccagccagtctcccagaaccactcaccaccaccagtcccagtaccagtacagcagcca
tacgtccacgtgaaccaggatgccctgctcaacctgcctgctgcccagccgtctctctat
gacctggagatcaccatctcctacaggaggagagagatgttgaagacccaggtgtcaggc
cccatggttcagctccactaccagtgtgatgtccctgagcccaacgcccagaccctctgc
ttccccagcactgacggcctgctagaccacaaacagattgaatacaccaactgcatccta
gggagtgtccaaaggggtcttctcctggaggtacgaaacacgggtatctatggttaccgg
caggacaaatgccatgtgttctctagtactagtgaccccagagaggcacaccctgaaccc
aggaagatgccccaaaatgaaatggtacaactgttgagcttcgacaagtacatgactgag
ctgatagcatttaaggagaacagaggaggctctcctgactataccatccacatgtgcttt
ggcgagaagttcccagacggaaaacccctggagaagaaactcatcattgtcaaggtggtt
cccttgatctgtcgtcacttccacgagatggcccagggggagggggcatcttccctccag
aacgacaacatcagcctgcagatctcccaccacaacagcctgatggagcttatcagtgcc
acctggcccgacggcccagagcacaccatggggcaatacttctag
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