Oncorhynchus keta (chum salmon): 118395881
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Entry
118395881 CDS
T09424
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118395881 (ppfibp2b)
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118395881 (ppfibp2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
FxsA
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
118395881
NCBI-ProteinID:
XP_052322072
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All DBs
Position
17:complement(43394323..43490266)
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AA seq
982 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRAQVPSSTAHMLMDWLDMDRGSDRGSVNLRSPVNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRNSLETQKLDLMD
EVSYLKLKLVSMDEKQNHNDSSKDQQNKAECVVNLISELQEQMCRFQEEIHNRIMEKRAM
EAQGESGAREAHDQSPDVGLGGSDMEEFCCRCGGQNGLLQELRLLKSKVEVLEGEKLQYE
RKLKATKVEIADVQQILASKDSEIEGLQSQLVSRGPMTNENPERVEVFRRLLTDQYQEFQ
RLKMGMESLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQVTSDKLLVGSSEEELSGSL
KRRALTHKAHSDIIRSEMSSRCSSPLLRSSSSFQKELNSSNQTSLETSTVMVSPSDAGCF
HNGQWSQPQMLSSSLEELQSRSLPKHVVGQPVEAVSENRHMEMNKYQTLPGKLSRPDMNG
DQEQYATPVQLSPDDSEDSELNLRKSERLDESTQSDLSPLSSGVDSGKQSPVSPENKKNH
LGIKKLWGKIRRTQSGTLQREDLEPGEFKRGGLRATASPRLARTGETLTSVWDLKTPFSK
WTPEQVCCWLAESGLDQYVILAQHWANSGQTLLSASPQDLEKEMGIKNPLHRKKLQLALK
SFSTKTTEKSSELDHIWVTRWLDDIGLPQYKGQFHEGRVDGRMIQYLTVNDLLFLKVTSQ
LHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAP
NLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQEKREFM
ESLGYAPLSTTAKVRPKKLGFSNFGHLRKKRCDESTDYICSLEVAQVQAVLNGAHRPYSG
FRGLSPILDRDPDRRQQVGPNS
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatc
gcaggctccaaggctgcagccgagtacaccaatggcctgtttgagctgggctctccaggt
agcgcagggcccctgcaggttctacagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagaggaacaccctgagggcccaggtccccagcagcactgctcac
atgctcatggactggctggacatggacaggggctcagacaggggctcggtcaaccttcgc
tccccggtgaacaatgagagctatcaggagcgtctggttcgcctagaaggggacaaagag
tctctggttctccaggtgagcgtgctcacagaccaggtggaggcccaaggagagaagatc
cgagacctggagagctctctggaggagcaccaccacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccggaactcgttggagacccagaaactagatctgatggat
gaggtttcctacctgaaactgaagctggtcagcatggacgagaaacagaaccacaacgac
agcagcaaggaccagcagaacaaagctgagtgtgtggtaaatctgataagcgagctccag
gagcagatgtgtaggtttcaggaagagatccacaaccgtatcatggagaaacgggccatg
gaggcccagggggagagtggtgcccgcgaggcccacgaccagagccctgacgtgggcttg
ggtggctctgacatggaggagttttgctgtcgctgtggaggacagaatggcttactgcaa
gaactcaggctcctcaagagtaaagtggaagtgctggagggggagaaattgcagtatgag
agaaaactaaaagccacgaaggtggagatagcagacgtacagcagatactggcttccaaa
gactctgagatcgagggccttcagagccagctggtctccagaggcccaatgaccaatgag
aatccagagagggtggaggtctttaggagactgctgacagaccaataccaagaattccaa
aggttgaaaatggggatggagtcgttgttagcggcaaatgatgagaaagaccgtcacata
gaggagctcactgttctcctgagacagtacaggaagatgaaggaggtgatggccctcgca
caagtgaccagtgataagctccttgttggaagcagtgaggaggaactgagtgggagtctg
aagaggagagctctcacacataaagctcattcagacatcatccgttcagagatgtcttcc
aggtgctcctctcctctgttaaggtcttcctcatccttccagaaagagctgaactctagt
aaccagacctccctggagacgtccacggtgatggtctccccgagcgatgctggctgcttc
cacaacggacaatggtcccaaccacagatgctttcaagcagcctggaggagttacaaagc
agatcgttaccaaagcatgtagtgggtcaaccagttgaagcggtttcagagaatcggcac
atggaaatgaacaaatatcagaccctaccagggaagctatctcgacctgacatgaatggg
gatcaagagcagtatgccacaccagtccagctgtcccctgacgatagcgaggacagtgag
ttgaacctaagaaagtcggagagactggatgagtccacgcagtcggacctgtcccccctg
tcatctggagtggactcaggaaagcagtctcctgtctccccagagaacaagaagaaccac
ctgggcatcaagaaactctgggggaagattcggaggacccagtctggcaccctgcagaga
gaggaccttgagcctggagagtttaagagggggggactgagagccaccgccagccctcgt
ctggcccggactggagagacattgacctctgtgtgggatttgaagacacccttctccaag
tggactccggagcaggtctgttgctggctagcggagagtgggctggaccagtatgtgatt
ctggcccaacattgggccaacagtgggcagaccctcctctccgcctcaccacaggactta
gagaaggaaatggggattaagaatccactgcacaggaagaagttgcagttggccctcaag
tccttcagcaccaaaacgactgagaaatcctctgaactggaccacatctgggtcacacgt
tggcttgatgacattggtttacctcaatacaagggtcagtttcacgagggaagagtagac
ggcagaatgattcagtacttgacagtgaatgacctcttgttcctgaaagtgaccagtcag
ctccatcatctcagtgtgaagtgtgctatccacgtcctccacgtcaacaagttcaacccc
aactgcctgaagagaagacctggagatgagaacaagacttctccctctgaggtggttcag
tggtcgaaccacagggtgatggagtggcttcgctcagtggacctggcggaatacgcaccc
aacctgaggggcagcggggtgcacgggggcctcatcattctggagcctcgttttaactca
gataccctggccatgctgctgaacatcccccctcagaagaccctgctgcgacgtcacctg
gccaccaacttcaacatgctggtgggctcccaggctcagcaggagaagagggagttcatg
gagtctttaggctacgctccgctcagcaccacagccaaagtcaggccaaagaagttgggc
ttctcaaacttcggccacctgaggaagaagaggtgtgacgagtcaacagactacatttgc
tccctggaggtggcccaggttcaggcggtgctgaacggggcccaccggccctactccggc
ttcaggggcctcagccccatcctagacagagacccagacagacggcagcaggtggggcca
aacagctga
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