Oncorhynchus keta (chum salmon): 118395910
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Entry
118395910 CDS
T09424
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118395910
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118395910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
118395910
NCBI-ProteinID:
XP_035645885
LinkDB
All DBs
Position
17:44874308..44909991
Genome browser
AA seq
1785 aa
AA seq
DB search
MLIIQIATLLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSSNSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSMVNTTTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNVSGGV
CNECQHNTMGHNCEQCKPFYFQHPERDIRHPSICEPCNCDPVGSLNGGICDRMTDVSSGL
IAGQCRCKPNVEGEQCDQCKQAHYGLGDHLLGCMACTCNALGTVPGGSPCDTDSGVCYCK
RLVTGRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGFVNVPEGAYLEFFID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YAVLPRPVCFEAGMNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLEIFTGSEGGD
LATSSAWNTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCNPQGSEHVFCHEATGQCACIH
GVYGRQCDHCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLDCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQYAGGCYHGLDSHYQVFCICNPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGRGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPAVGDCHCDLGSGQCQCLPNVVGQHCDQCAPDTWNMASKRGCE
SCDCDPNHSFGTSCNELSGQCSCKPGFGGKMCQECRELFWGDPEVKCNACDCDPQGIAEQ
QCNKANGHCVCLEGVSGPRCNLCARGSSGTFPYCERCHQCFADWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHAIDNMEQSARSIRTILAQNLATQPLSEIQQLLEQATDLMEEMSN
KLNLTEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYQQSLAAGAQANASTTDPGNPVESSFVLRQATEDKMNDTRDEFHRRQEEHSKRLDDLA
DQLETLDLSELSEKTCGSPAGEACADSPCGGLSCVDSEGNRRCGGEGCNGLVTLANNAWH
KAKDFDQEILMAMEEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNQTKQRVDQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVRDLAQVETILN
QSADDVQRAENLLKQAGRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDIKG
TNDLLSSVESETADSEFKLNNATQRLLWLEKDITLLREKAQNTSLCSEQTERDAESINKV
AEQVKKDLESELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgttgataattcaaattgcgaccctgctatccgcaggggcgtgcgtccttgcccaggta
ccggagttcagcgatgtgtgcacagaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctcctccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaagagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagcatggtgaacaccaccaccggccaccgggtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtccgagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttccggcctgctgccatggtgattgagcggtcggccgactttgggaagaactggcag
gtgtaccgctacttcgcctacgactgtgagtcagcattccctgccatatcctcggggccc
atgcagaaagtggatgacgtcatctgcgattcacattactccgacatcgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctaagggtgaagttcaccaagctgcac
acactgggagacaacctgttggactcccgcatggagatcaaggagaagtactactacgcc
gtctacgacttggtggtacggggtaactgcttctgctacggacatgcctccgagtgcgcg
cccgtcgatggggctggggatgttgttgagggaatggtccatggccactgtatgtgcaac
cacaacaccatggggctgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggtaacgtgagcggtggtgtg
tgtaatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtcaccccagtatctgtgaaccgtgtaactgtgat
ccggtgggctctctgaacggtgggatctgtgacaggatgactgatgtgtcgtctggattg
atcgctggccagtgtcgctgcaagcccaatgtggagggagagcaatgtgaccagtgcaaa
caggcccattacggcttgggagaccaccttctgggctgcatggcctgcacctgtaatgcc
ctggggacagttcctggagggagcccatgtgatacagactcaggagtctgttactgcaaa
cgcctggtcaccgggagggactgtgaccaatgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctgggtggagccatcaataacgattgt
tcccaggagactggtcaatgtgtgtgtcgagaacacatgtttggccggcgctgtgaccag
gtggagtcaggcttctacttcattgccctggaccactacacctacgaggcagaggacgcc
aaatttggacctggtgtgacagtcgtgcagagaccccaccctcaggaccgtagccccacc
tggacagggataggtttcgtcaatgttccagagggggcctacctggagttcttcatcgac
aacatcccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacggtgatgcggcccagtgtgatttcagctgacagtcgc
tgtgccaacaccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgcagtgctccccagaccagtgtgtttcgaggcagggatgaactacactgttcgtctg
agtctgcccctctactccgcactcagtgacgtccagtccccatatacactcatcgactcg
attgtcctgatgccccactgtaagaacctggagatcttcactggctctgagggcggtgac
ttggccaccagcagtgcctggaataccttccagcgctaccgctgtctggagaacagtcag
agcgtagtgaagaccccgtccacagacatctgccgcaactttatcttcagcgtatctgct
ctgctgcaccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacggtg
tgtgatgccagcggcgggcaatgccagtgtcgccccaatgtagtaggcaggaactgtgac
aaatgttctcctgccacctacctgtttggacccagtggctgcagatcctgtgattgcaat
ccccagggatcggagcatgtattctgccatgaggctactggccagtgtgcttgtatccac
ggggtgtacggccgtcagtgtgaccactgtttgccgggacactggggcttccccaactgt
cgcccctgcacctgcaatggccacactgagcagtgtgacccctactctggagaatgcctg
gactgccgagaacagaccaccgggcacaactgtgagaggtgtctggaaggttactacggc
gaccctgtcctgggttcaggggaccactgtcgtccttgcatgtgtccggacgggccaggt
agcgggcggcagtatgccggtggatgttaccacggtctggactctcactaccaggtgttt
tgtatctgcaaccctggatacagaggtgccagatgtgaggagtgtgccccaggttactat
ggaaatccccatgagaacggcgggcagtgccaaccatgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccac
accgagggtcgaggctgccacagctgcaagctgggttactatggagatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggtaccaacccagccacgtgcccggcggtg
ggcgactgccactgtgatctgggcagcgggcagtgccagtgtctaccaaatgtggtgggt
cagcactgtgaccagtgtgcccccgacacctggaacatggccagcaagaggggctgtgaa
tcttgcgactgtgaccccaaccactcatttggaacgtcctgcaatgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaatgtgtcaggagtgcagagagctgttctgg
ggagaccctgaagtcaaatgcaatgcatgcgactgtgacccacaaggcattgccgagcag
cagtgcaacaaggccaacggtcactgtgtgtgcttggagggcgtgtctggtccccgctgt
aatctctgcgcccggggctcctctggcaccttcccctactgcgaacgctgccaccagtgc
ttcgccgactgggatgtgatcgtaggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccatacaaacacgccatagataac
atggagcagagcgccaggtccataagaactatcctggcccagaacctagctacacagcca
ctgtcagagatacagcagctactggagcaagccacagatctaatggaagagatgagcaac
aagctgaaccttactgaggaggcgttggcccaagtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactaccagcagtctctggctgctggggcccaggccaacgcctccaccaccgaccca
ggcaacccggtggagagctctttcgttctacgacaagctacggaggacaagatgaacgac
accagggacgagttccataggaggcaggaagaacactccaagagactggatgacctggcg
gatcagctggagacattggatctatcagaactcagcgagaagacgtgcggcagcccagct
ggtgaggcgtgtgcagactctccgtgcgggggtctgagttgtgtggactctgaggggaac
aggaggtgtgggggtgaggggtgtaacggtctggtcaccctggccaacaatgcctggcat
aaggccaaggactttgaccaggaaatcctcatggccatggaggaggtggacaagctctcc
aagatggtgtcagaggccaaggtgaaggcagacgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaaccagaccaagcagcgcgtggaccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcagacatggagagcatcgag
gcagtggccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgcgagacctggcccaagtggagactatcctcaac
cagagtgctgacgatgtgcagagagccgagaacctactgaagcaggcaggcagagctagt
aaagaggccacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcagccgaggccatcaaacaggctaccactgacattaaaggc
acaaatgacctcctgtcctcagtggagtcggagacagcagactcagaattcaagctgaac
aacgccacccagaggctgctgtggttagagaaagacatcacactgctcagagagaaggca
cagaacacctcgctttgctctgaacaaaccgagagagatgcagagagcatcaacaaagtg
gctgagcaggtcaaaaaggacctggagtcggagctgaaggataagtacagcaccgtgcag
gacctgatcaaacaggaggccgggggtgtggccgacgccaagaagagggcggagcttcta
cagcaggaagccacagaccttctgctacaggccagtgacaaattacagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtgaaagagctgctgcaggagatcagtcacaaagtcactgtgtac
agcacctgtctgttttaa
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integrated database retrieval system