Oncorhynchus keta (chum salmon): 118395917
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Entry
118395917 CDS
T09424
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118395917 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118395917 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118395917 (amfra)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
118395917 (amfra)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118395917 (amfra)
Multi subunit type E3
ERAD complex
118395917 (amfra)
LMBR1L-GP78-UBAC2 complex
118395917 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
G2BR
zf-C3HC4_2
zf-C3HC4
CUE
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
118395917
NCBI-ProteinID:
XP_035645897
LinkDB
All DBs
Position
17:complement(45206167..45222407)
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AA seq
630 aa
AA seq
DB search
MPLLFLERCPWPTLQTYTALSAVFLAGSILSGYCTVPEPVEYTQTQSSSPVESDDVDEDP
ITSLSDVAATVRLYLVSNTVFVWVMVNTACCVLMLIAKVIQCIVFGPLRVSEKQHLKDKF
WNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAVLVFMHLMVQLCKDRFEYLSFSPTTPMDS
HVRVLTLLVGMLLTCCGLALLCGLLGNPHGVHTVTFMAAECMLVSVRTGHVIIRYFIHLW
DLNHEGTWESKGSYVYYTDFVMELALLGLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLF
HEVQKRIRRHKNYLRVINNMEARFAVATSDELVANNDDCAICWDSMLTARKLPCGHLFHN
SCLRSWLEQDTSCPTCRMSLNISEGAGGEREERQREPMLEDNMGPGGPGPDARQHLNQHN
HFFHFDGSRIASWLPSFSVEVMHTTNILGIVQQANNSQLNAMAHQIGEMFPEVPYHLVLQ
DLQLTHSVEVTTDNILDGRIVVPFPIQPVDHSASQVNPSPQDVGGASGSSEFVTPEVEDF
EVRGSRFSKSAEERQKILLQRKDELLLRAQRRYLSKSPEENAAAMNDDDEYDEGLPSLDD
DIPAGSVLDSMTLRRRKLAAAAERRMHTYQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctgtttttggagagatgtccatggcccactttgcagacatacacagctctg
agtgctgtatttctcgctgggtcaatattgagtggctactgtactgtcccagaaccagta
gagtacacacagacacagagcagttctcctgtagaaagtgatgatgttgatgaggaccca
atcaccagccttagtgatgtggcagccactgtccggttgtacctggtctcaaacactgtt
tttgtttgggtgatggtgaatacagcctgttgtgtcctgatgctgattgcaaaggtgatc
cagtgcattgtctttgggccgctccgtgtcagtgaaaaacagcacctaaaggacaagttc
tggaacttcatcttctacaagtttatcttcatcttcggggtgctcaacgttcagacggtg
gaggaggtggtgatgtggtgtctgtggtttgctgtcctcgtcttcatgcacctcatggtc
cagctctgcaaggaccgctttgaatatctgtcattctcacccaccactcctatggacagc
catgtgagggttctgaccctactggtgggtatgctgctgacctgctgtggcttggctctg
ctctgtgggctcctgggaaatccccacggcgtacacaccgtcaccttcatggccgctgag
tgtatgctggtgtccgttagaactggacatgtcattatccggtactttatccacctgtgg
gacttgaaccatgagggcacctgggagagtaaaggatcctacgtttactacactgacttt
gtgatggagctggctttgctggggctggaccttatgcaccacatccacatgctgctgttt
ggtaacatctggctctctatggccagcctggtgatcttcatgcagctgcgttacctgttc
catgaggtgcagaagagaatccgtcgccacaagaactacctccgtgtcatcaacaacatg
gaggccaggtttgctgtggccacctctgatgagctggtagcgaacaatgatgactgtgct
atctgctgggactccatgttgacagcacgcaagctgccctgtggacatctcttccacaac
tcttgcctgcgttcctggttggagcaggacacgtcgtgtcccacgtgccgtatgtctctg
aacatcagcgagggggctggaggagagagagaggagaggcaaagggagcccatgctggaa
gacaacatgggccctggaggccccgggccagatgcaaggcaacacctcaaccaacacaac
cacttcttccactttgatggttctcgcattgccagctggctgcccagtttctctgtggaa
gtgatgcacacaaccaacatcctgggaatcgtacaacaggccaacaactcccagctcaat
gccatggcccatcaaatcggggagatgtttccggaggttccctaccatcttgtgctgcag
gatctgcagctgacccactctgtagaggtcaccactgacaacatcttggacggacgcatc
gtggttcctttccccatacagcctgtggatcactccgcctcccaggtcaacccctcccca
caagatgtgggtggggccagcgggagttcagagttcgtgacccccgaggtggaggatttt
gaggtcagaggcagccgcttctccaagtcagccgaggagagacagaagatactgctacag
aggaaagatgagctgctgctacgagcacagaggagatatctgagcaagagcccagaggaa
aatgctgctgctatgaacgacgatgatgagtacgatgaaggtctgccctctcttgatgat
gacatcccagcaggctcagttttagactctatgaccctgcgacgcagaaagttagcggca
gctgctgagcgccgcatgcacacttaccagtga
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