Oncorhynchus keta (chum salmon): 118395950
Help
Entry
118395950 CDS
T09424
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118395950 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118395950 (poc1b)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118395950 (poc1b)
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118395950 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Ge1_WD40
eIF2A
Beta-prop_IFT122_2nd
Beta-prop_WDR75_2nd
RMC1_N
Cytochrom_D1
DUF6986
THSD1_N
Motif
Other DBs
NCBI-GeneID:
118395950
NCBI-ProteinID:
XP_035645949
LinkDB
All DBs
Position
17:46903144..46977893
Genome browser
AA seq
509 aa
AA seq
DB search
MASVMEDPTLERHFKGHKDAVTCADFSSKHKQLASGSADKTLMIWNLNPKARAFRFFGHK
DVITGVQFSPAGDLVVSASQDKTVRLWTPSIKGESMVFKAHTATVRSVSFSHDGQRLVTA
SDDKSVKVWSVHRQRFVYSLNQHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSTKQCIN
CFTEYGGSATFVDFNTSGTCIASSGADNTLKIWDIRTNKLLQHYQVHSSGINCFSFHPSG
NYMISGSSDSTVKILDLLEGRLIYTLHGHKGPVLAVAFSRGGDFFASGGCDAQVLMWKTN
FDSFDYREVLSRHSQRVSPDPPPHLTDIYPRGPHLHSAQSGAIEISPMVADTQTTAPAVI
EVGQTLYTATTAVNGHANNLPARRIASTSLNPNEDCHSSGQGSTSGSQSGQMGGRREEEQ
GMTYPLEMRSDLPMNFSSTLERIVQQLDVLTQTVSVLEERLTLTEDKLKECLFNQSQILL
QVRGEEKDRRRERVEEEWEGESGSPVASA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttatggaggaccccaccctcgagcgacacttcaagggccacaaagatgct
gtcacctgtgcagacttcagttccaaacacaaacagctggcctcagggtctgcagataag
accctgatgatttggaatctgaaccctaaggccagggcgttccgtttttttggacacaaa
gatgtcatcacaggggtccagttctcccctgcaggagatctggtcgtctctgcatcccag
gacaagactgtacggctgtggacgcccagcattaaaggagagtcgatggtgttcaaagcc
cacacggctacagtacgcagtgtcagcttttctcacgacggccagaggctagtgactgcg
tcagacgacaagtctgtcaaggtgtggagtgtccacagacaacgttttgtctactcactc
aaccagcacaccaactgggtccgctgcgccaggttttctcctgacggccgtctaattgcc
tcctgtggtgacgaccgcacagtgcgactgtgggacacctccaccaaacagtgcatcaac
tgcttcacagagtatggaggatcagcaacatttgtagacttcaacaccagtggcacctgc
atagcatcctcaggagcagacaacacgttgaagatctgggacatacggacaaacaaactg
ctccagcattaccaagtccacagttcagggatcaattgcttttccttccacccgtctgga
aactatatgatcagtggctccagtgacagcacagtgaagatcctggacctgctggaggga
cgcctcatctacaccctccacggacacaagggtcctgtcctggctgtggccttctccagg
ggaggagacttctttgcctcagggggttgtgatgctcaggttttaatgtggaagaccaac
tttgattcttttgactaccgtgaggtcctgagcagacacagccagcgggtcagccccgac
ccccctcctcacctgacagacatctaccctcgaggaccacacctccactccgcccagtct
ggggctatagagatcagtcccatggtggcagacacccagaccactgccccggctgtcata
gaggtgggccagaccctctacacagccactacggctgtcaacggccatgcaaacaatttg
ccagcacggcggattgccagtaccagcctcaaccccaatgaagactgccacagtagtgga
cagggttcgacatctggttcccagtccgggcagatgggaggcaggagggaggaggaacag
gggatgacgtaccctctggagatgcgctcagacctccccatgaacttcagcagcaccctg
gaacgcatcgtccagcagcttgacgtcctcactcagactgtctctgtgttggaagaacgt
ctcaccctgacggaggacaaactgaaggagtgtttattcaaccagagtcagatcctgctg
caggtgcgaggggaggagaaggaccgaaggagagagagagtggaggaagagtgggaaggt
gagagcggatcccctgtcgcctcagcctaa
DBGET
integrated database retrieval system
