Oncorhynchus keta (chum salmon): 118396004
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Entry
118396004 CDS
T09424
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like isoform X1
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118396004
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118396004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
118396004
NCBI-ProteinID:
XP_052322382
LinkDB
All DBs
Position
17:51439431..51456801
Genome browser
AA seq
721 aa
AA seq
DB search
MEESEVGELSVEDEPKRRRISSKRTSAVHSETSPATVNNSKKPPLCRGSSFTFLTPGTPW
DFSLKRKHKEPKDDDTVSLSSFDLKVKRKRKEKKEDDDTVSLSSFDLKEPSNKRVRPLSR
VSSLANLISPSKNGAVRRFGQTIQNMSLRGDSKSPGASLKSCSKAAGPTPPKRRNSTLWS
ETLDVHQKSTFSTKEIKRQEAIHELSRGEQDLIEDLQMARKAYHDPMLKLSIMTEEELTH
IFGDLDSYIPLHEGTRSSSYSYIPLHEGTRSSSYSYIPLHEGTRSSSYSYIPLHEGTRSS
SYSYILLHEGTRSSSYIPLHEGTRSSSYSYILLHEGTRSSSYSYILLHEGTRSSSYSYIP
LHEDLLDKLAKGTGPNGTVGQIGQIVVDWLPGLNAYRDYCSNQLAAKALLDQKKQDRKVQ
DFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLREILRHTPPDHPDVPCLEKAIAIIQ
GVLSDINMRKGESESQYYINKLEYLDDRQRDPLIDNCKTLLCHGELRNKSGSKLHVFLFS
ELLVLTRPVTRHERSCYQVYRQPLPIRDLALEDLQDGDVRMGGSFRGAFSQGEKAKNVFR
VTSLDPTHGQSHTLQVNDVFHKQQWLNCLRSAIDAQPQQQRAPLRDQHSEATTMTRAKRR
SSVVSMSDMVGEGADENVWHQVGEPILGCKGTETLPASGSSSKIKREWRRGTQRRRKETG
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccgaggtgggcgaattatctgtggaagacgagccgaagagacgaaggatt
tcctcgaagagaacgtccgcggtccactcggaaacctcccccgccactgtcaacaactcc
aaaaaacctccactgtgccgagggagttccttcacctttctgactccaggaacaccatgg
gacttcagtctgaagaggaaacataaagagcccaaggatgatgacactgtcagcctgtcc
agctttgacctcaaagtaaagagaaaacgcaaagagaaaaaggaggatgacgacaccgtc
agtctgtctagttttgacctcaaagagcccagtaacaagcgtgtgcggccactgagccgg
gtgtcatctctggctaacctgatttccccttccaagaatggagccgtccgacgctttggt
caaaccatccagaacatgtcactgcggggtgacagcaagtcgccgggggcgtccctgaag
tcgtgcagtaaggcagcgggcccaacacctcccaaacgtagaaacagcactctgtggtct
gaaacactggacgttcaccagaagagcaccttctccaccaaggagattaagagacaggag
gccattcatgagctatccagaggagaacaagaccttattgaagacctccaaatggcacga
aaggcatatcatgatcccatgctgaagctttccatcatgacagaggaggagctaactcat
atatttggagatctggattcgtacattccacttcatgaaggtactaggtcttcatcatat
tcgtacattccacttcatgaaggtactaggtcttcatcatattcgtacattccacttcat
gaaggtactaggtcttcatcatattcgtacattccacttcatgaaggtactaggtcttca
tcatattcgtacattctacttcatgaaggtactaggtcttcatcatacattccacttcat
gaaggtactaggtcttcatcatattcgtacattctacttcatgaaggtactaggtcttca
tcatattcgtacattctacttcatgaaggtactaggtcttcatcatattcgtacattcca
cttcatgaagacttgttggataagcttgcaaagggcaccggtcctaatggaacagttggt
cagattggacagatcgtcgtggactggttgccaggtctgaatgcgtacagagactattgc
agtaaccagctggctgccaaggccctgttggaccagaagaagcaggaccggaaggtgcag
gacttcctgcagcgctgcctggagtctcccttcagtaggaagctggacctgtggagcttc
ctggatatacccaggagccggctggtgaaatatcccctactgctgagagagatactgaga
catacaccaccagatcaccctgacgttccctgtctggagaaggcgatagccatcatccag
ggtgtgctgtctgacatcaacatgaggaagggagagtcagagagtcagtactacattaat
aagctggagtatctggacgacaggcagagagacccgctcatcgacaactgcaagaccttg
ctgtgtcacggagagctacgcaacaagagtggctcgaaactgcacgtgttcctgttctct
gagctgctggtgctgacaaggccggtgacacgtcacgagcggagctgctaccaggtgtac
cgtcagcccctccccatcagagacctggctctggaggacctgcaggatggagacgtacgc
atgggagggtcattcagaggggccttcagccagggggagaaagctaagaacgtgttccgc
gtgacctccctggacccgacccacggccagtctcacactctgcaggtcaacgacgtcttc
cacaagcagcagtggctcaactgtctccgcagcgccatcgacgcccaacctcaacagcag
agggcgccactccgagatcagcacagtgaggctacaaccatgaccagggccaagcgtcgt
tcttctgtggtgtccatgtctgatatggtgggggaaggggcagatgagaacgtctggcac
caggtcggtgagccaatccttgggtgtaaaggcacagagacactccccgcgtctggttct
tcaagtaaaatcaaaagagagtggcgccgtggtacgcagcgcaggaggaaagagaccggg
gtttag
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