Oncorhynchus keta (chum salmon): 118396061
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Entry
118396061 CDS
T09424
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118396061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118396061
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118396061
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Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
118396061
NCBI-ProteinID:
XP_035646088
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Position
17:48582489..48594596
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AA seq
660 aa
AA seq
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MNSCSLEQNGTGTVISPTTVILGTDENISVLPGTVTGDGDDDDEGGDENKARGNWSNKMD
FILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGP
VSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNKWNTQH
CKDKDMLLLESCILRDANATSIRNTTLCLSADVIGNLSKLTNITSEINKTYVSPSEEYFK
YNVLNISRGIEYPGEIRWPLALCLLLAWAIVYASLAKGIKSSGKVVYFTATFPYVVLVIL
LVRGVTLPGAGDGILYFITPKWEKLYDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHN
NCYRDTIIVACTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADGGPGIAFVVYPEALTR
LPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPRYLRKYKALFTLGCCTSFYIL
GYPMITENGMYMLQLVDTYAASYSLIIIAIFELVGVSYIYGLKRFCEDIEMMIGFQPNMF
WRVCWAFVTPTILTFILGLSLYHWKVMTYETYTYPTWSMVMGWLMVVCSVIWIPIMFGIK
MHLAPGTFIQRLKLVCAPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKGLGQTQC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttgttccttagagcaaaatggcacggggacggtgattagtcccaccactgtg
atactggggacagatgaaaacatttcggttctacctggcacagtgaccggggacggggat
gatgatgacgaaggaggggatgagaataaagcgagaggaaactggtccaataaaatggac
ttcattctctcaatggttggatatgctgttggtttgggaaacgtctggagattcccatac
ctagccttccaaaatggaggaggtgctttcttgattccttatctaataatgttgggtctt
gctggaatccccatattcttattggaggtgtccttggggcagtttgcaagccaaggaccc
gtgtccgtatggaaagcaatccctgctcttcaaggttgcgggattgccatgttgataata
tcagtcttgatagccatatactataacataataatgtgctggacattgtactacctgttc
gcttcgttgaagggctcactcccctgggcgaactgcaagaataaatggaacactcaacac
tgcaaggacaaagacatgcttcttcttgagtcatgcattctgcgtgatgcgaacgccacc
tctataaggaatactacactgtgtttgtctgctgatgtcattgggaatctgagcaaactc
actaacatcacatctgagatcaacaaaacctatgtcagcccaagtgaagagtattttaaa
tataatgtactgaacatctccagaggaatagaatacccaggggaaatccgctggcctctg
gccctctgtcttctcttggcatgggctattgtctacgcctcactggctaaaggaatcaaa
tcatctgggaaggtggtgtatttcacagctacgttcccctatgtggtgctggtgattctg
ctggtcagaggagttactctgcctggagctggggatggcatcctctacttcatcactccc
aagtgggagaaactctacgatgccaaggtgtggaaggatgctgcaacccagatcttcttc
tccttgtcagcagcctggggtggactcatcacgctgtcctcctacaacaagttccataac
aactgctacagggacaccatcattgtggcctgcaccaacagtgccaccagcatctttgca
gggtttgtcatcttctctgtcatcgggtttatggctcatgagctgaaagtgcccatcgaa
caggtggctgatgggggtcctggcatagccttcgtagtgtatccagaggccctcaccaga
cttcctctctctcctttctgggccatcatcttcttcctcatgctactcaccctgggactg
gataccatgtttgccaccattgagaccatagtgacgtctgtgtcagatgagttccccaga
tatctgaggaagtacaaggccctcttcaccctggggtgctgcacctctttctacatcctg
gggtaccccatgatcacagagaatggaatgtatatgcttcagctggtggacacatatgca
gcctcatactctctgatcatcatcgccatctttgaacttgtgggagtatcatacatttat
ggtctgaagaggttctgtgaagacattgaaatgatgatcgggttccagccaaacatgttc
tggagggtctgctgggcctttgtgacccccaccattctcacatttattctgggtctgagt
ctgtaccactggaaggtgatgacctatgagacctacacctaccccacctggtccatggtg
atgggctggctcatggtggtgtgttctgttatctggatccccatcatgtttggcatcaag
atgcacctggcccccggcaccttcatccagcgtctgaagctagtgtgcgcccctcagcca
gactggggtcccttcctgatgaagcacagaggagaacgctacaagaacatgatcgacccg
ctaggaaccaactccctggggctcaaactccctcctaaaggcctgggccagacccagtgc
taa
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