Oncorhynchus keta (chum salmon): 118396159
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Entry
118396159 CDS
T09424
Name
(RefSeq) tsukushi-like isoform X1
KO
K08130
tsukushi
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118396159
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
118396159
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_LRWD1
LRR_RPS2
LRR_EndoS
LRRNT
LRR_NXF1-5
LRR_9
Motif
Other DBs
NCBI-GeneID:
118396159
NCBI-ProteinID:
XP_035646191
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All DBs
Position
1:23108757..23132910
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AA seq
356 aa
AA seq
DB search
MIKSMMAFLLCVSLWMLLAVHGQAGAVKNCHPGCHCEVESFGLFDSFSLTRVDCRGVGPS
TNPISIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSNNLISMVSPKALSRLRYL
ESLDLSHNSLEGLDEGCFSGLPLAEVDLSHNHFREFDLDMFITKDHGEPISVDLSHNRLT
VVSWSSSRSPLLHVQSLTLAANQLRAVPKLKGILLRDLNLDGNSISHIEEGAFEDLKDLV
YLSLSGLPELFNIQPNCFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGIT
SLPNNMLSHLPIIKSITLGQNIHCWRTQKQGQFHRQLGQEQKHDEVLTCDVEGVIS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagcatgatggcgtttctcctgtgtgttagcctgtggatgctcctggctgtc
catggccaagctggagcagtgaagaactgccacccgggttgccactgtgaggtggagagc
ttcggcctgttcgacagcttcagcctgaccagggtggactgcaggggagtgggccctagc
accaaccccatctccatccccctggacactgcccacttggacctctcttccaactctatg
tccctgctgactgacaccatgctctctgggcctggctataccaccttggtcagcctggac
ctcagcaacaacctcatctccatggtcagccctaaggccctgtccaggctgcgctacctg
gagtctctggacctcagccacaactcgttggagggcctggacgagggctgcttctctggc
ctccccctggccgaggtggacctcagccacaaccacttccgagagtttgatctggacatg
ttcatcactaaagatcacggagagccaatcagcgtggatctgtcccacaaccggctgaca
gtggtctcctggagttcttctaggagccccttgctacatgtccagagcctgactctagca
gccaaccagctgagggccgtgcccaagctaaaaggcatcctgctgagggacctaaacctg
gatgggaacagtatctcccacattgaggagggtgcttttgaggacctcaaggaccttgtt
tacctgtccctcagtgggcttcctgagctctttaacatccagcccaactgtttcagaggc
ctacagaaccttcaggtcttagacctctccaacaatgccaagctaaaaacactgagccca
gctgtgttcagtggacttgtgtctctacaggagctcaatctgtcaaactctggaataacc
tcattgccaaataacatgctaagtcacttgccaatcatcaagagtatcaccctgggccag
aatatccattgttggaggactcaaaagcagggccagtttcacaggcagctcggacaggaa
cagaaacatgacgaggtgctgacctgtgacgttgaaggggttatttcatga
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