Oncorhynchus keta (chum salmon): 118396160
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Entry
118396160 CDS
T09424
Symbol
smc4
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118396160 (smc4)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
118396160 (smc4)
Condensin II
118396160 (smc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
SAM_KSR1_N
Motif
Other DBs
NCBI-GeneID:
118396160
NCBI-ProteinID:
XP_052375264
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Position
1:complement(34050141..34077872)
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AA seq
1230 aa
AA seq
DB search
MLVDLSLGLLLASHRREEPVQVNGEEVLLHLHHQADLTGQQVLSLDLVVLTAGVQLVCSG
AAHTAHKLFVCPGVKEDNEIVTAKTSKSRTTSKPRGKGSQPRDDSGGELDVPHKEANSNG
QEAPRTNAPAPGEGAEAVDNRGLEEILGSIPPPPPPAMTNEPGAPCLMITHIFNQNVKSC
AGEQILGPFHKCFSCIIGPNGSGKSNMIDSXGYRAQKIRSKKXSVLIHSSDQHKDVQSCT
VEVHFQKITDKEGDDYEVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGTLLRSHGID
LDHNRFLILQGEVEQIAMMKPKGQTEHDEGMMEYLEDIIPSCRLKQPIHTLRXRVELLNG
ERRGACFTLNRVRMVEKTALEGVNNTAVEFLTLENDIFXQKSQLCQYYVHDFQKRVANKE
EEKQRIQDDTKELXEKNNNIAEEMKNQDLKNVEKKQGKLTKYKEFQQEKFTQLDLQDVEV
XEKLKHTKKLQKELEKDKEKLEEVRNVPASSEKIISEASARREVLEKEKLKEVMESLKEE
TSGLQQEKDIMAKELSKSVNKIRDXESELDIYLSRHNTAVTQLNTAKQSLQIASDTLRDR
RAAIKGLQVKIPQCEQELQKDKAELEQLLQADGQTRELVRDMRQKVEEAKSSLSSNRSRG
KVPDALMQQKRSGKIPGILGRLTVFLSXPGVLGAIDXKYDIAISSSCGSLDNILVESIDX
AQECVNFLKDQNNGLATFIDLGKMKVRENKMGPISTPENIPCLFDMVRVQDESMKPAFYF
ALRDTLVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGGGRVMRGRMGSSIGTEVTQQE
LDCMESKLIEKVVQLQGCQKWKLQLEEKVQRLLQQLRDMKNTLEKYTNNMQSLAEQEAHL
KPQIKELDDNVLAANPNRNKQKQLEKTLKDFQKASSKAGKVERLHTLIVDINSHKLKAQQ
DKLDKVNKEQMDTSITEHTNKIKHYESRPPRASKLSLHAIEDDLAATKGPGVITNQISLM
QARCAQMKPNLGAIAEYKKKVHTQLSLGGTVHEQDEIRDNFKRGCEDLCKQRLNEFMACF
NITNKLKENYQMLTLGGDAELELVNSLDPFXEGIIFSVRPPKKSWKKVFNLSGGEKTLSS
LALVFALHHFKPTPLYFTDEINAALDFKNVSIVACYIYEQTKNAQFISLRNMFEIADRLI
GIYKTHNTTEWGNQLENHCLQTDNLSLEQQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgatctcagcctgggcctgcttcttgcctcccaccgccgtgaggaaccagtg
caggtcaatggggaagaggtcctcctgcaccttcaccaccaggctgatctcactggtcag
caggttctatctttggatctggtggtcctcactgcaggagtacaactcgtctgcagtggt
gcagcccacacagctcacaagctctttgtgtgtccaggtgttaaggaggacaatgaaatc
gtgacagccaaaacgtcgaaaagtagaactacttccaagccaagagggaaagggtcgcag
cctcgggatgactccggaggcgagttggacgtaccccataaagaagcgaactccaatggc
caagaggctccgcggacaaatgctccggctcctggggagggtgccgaggctgttgataat
cgaggtttggaggagattcttggtagcatccctccacccccgcccccagcaatgaccaat
gaaccaggcgctccttgcttgatgattacacatatatttaatcagaacgtcaaatcctgt
gccggcgagcagattctgggccctttccataagtgtttttcttgtattattggtccaaat
ggcagtgggaagtccaacatgatagattcantaggctatagggctcaaaaaatcagatcc
aaaaaannctctgtgctgattcacagctctgaccagcacaaggatgtgcagagctgcact
gtggaagtgcattttcagaaaattactgacaaggaaggagatgactacgaagtcatcccc
aacagcaagttctatgtttccagaactgccagcaaagacaattcctcgtcctaccacatc
aatggcaagaaggccactttcaaagatgtggggactctgctgcgtagccatggcattgac
ctggaccacaacagatttttgattttacagggtgaggtggagcagatagccatgatgaag
cccaaggggcagactgagcatgatgagggcatgatggaatacctggaggacatcattcct
tcttgccgcctgaagcagcccatccacaccctgaggtgacgtgtggagctcctcaacggg
gagagaagaggggcctgtttcactctaaacagggtcagaatggtggagaagactgctctg
gagggagtgaataacacagccgtggagttcctcactctggagaatgatattttctaacaa
aagagccagctctgccagtactatgtccatgacttccagaagagagtggcaaacaaagag
gaggagaagcagaggatccaagacgacaccaaggaactcnnagagaagaacaacaatatc
gctgaagagatgaagaaccaagatctgaaaaatgtggagaagaaacaaggcaagctgacc
aagtacaaagagttccagcaggagaagtttacccagctggacctgcaggatgtggaggtc
tgagagaaactgaagcacaccaagaaactacagaaagaacttgagaaggacaaggagaag
ctagaggaggtgcgtaacgtgccggccagcagtgagaagatcatctctgaggcgtccgct
cgcagggaggtgttggagaaggagaaactgaaggaagtgatggagagtctgaaggaggag
accagcggcctgcagcaggagaaggatattatggcgaaggagctgagtaagtctgtgaac
aagatacgagatnacgagtctgagctggacatctacctgagtcgccacaacaccgctgtg
acccagctaaacacggccaagcagtccctgcagatcgcctccgacacactgcgagaccgc
cgcgccgccatcaaagggctgcaggtcaagataccccagtgtgagcaggagctccagaag
gataaggcggagctggagcagctgctgcaagcagatggtcagaccagggagctggtgagg
gacatgaggcagaaggtggaggaggccaagagctccctgtcctctaaccgcagcaggggg
aaggtgccggacgccctcatgcagcagaagaggagcggcaagatccccggcatcctgggg
cgactaactgtgttcttgtcctgaccgggtgttcttggggccatcgattagaagtatgac
atcgccatctcatccagctgtggctctctggacaacatcctggtggaaagcatcgacnna
gcccaggaatgtgtcaacttcctcaaggaccagaataacggattggccacctttattgac
ctgggcaagatgaaggtgcgggagaataagatggggcccatctccaccccagagaacatc
ccctgcctgtttgacatggtgcgggtgcaggatgagagtatgaagccagccttctacttt
gccctgagggacaccctggtggccaaggacctggagcaggcaacacggctcgccttccag
aaggacaaacgctggcgagtggtcaccatgcagggacagatcatagagatggctggtgga
gggagagtgatgcggggcaggatgggctcctccatcggcactgaggtcacccagcaggag
ctggactgtatggagagcaagttgattgagaaggtggtgcagctgcagggctgccagaag
tggaagctgcagctggaggagaaagtccagagactcttacagcagcttagagacatgaag
aacaccctggagaaatacaccaacaacatgcagagcttggcagagcaggaggctcacctg
aagcctcaaattaaagagctagatgacaatgtcctggctgctaaccccaacaggaacaaa
cagaaacagttggagaagaccctgaaggacttccagaaagcttccagtaaggcagggaag
gtggagaggctccacaccctcattgtagacatcaacagtcacaagctgaaggcccagcag
gacaaactggacaaggtcaacaaggagcagatggacacctccatcaccgaacacaccaac
aagatcaaacactatgagtcccgtcctccccgggcctctaagctctcccttcacgccatt
gaggatgacctggcggccaccaaggggcctggcgttatcaccaaccagatctccctgatg
caggcccgctgtgcccagatgaagcccaacctgggagccatcgcagagtacaaaaagaag
gtccacacccagctctctctaggaggaactgtacatgagcaggatgagatcagagacaac
tttaagcgtggatgtgaggacctgtgcaagcagaggctcaacgagttcatggcttgcttc
aacatcaccaacaagctgaaggagaactaccagatgctgacactagggggtgacgctgag
ctggagctagtcaacagcctggaccccttcnntgagggcatcatattcagtgtgcgtccc
cctaagaagagctggaagaaggttttcaacctgtctggaggagagaagaccctgagctct
ctggccctggtgtttgctctgcaccacttcaagcccacgcccctctacttcacggatgag
attaatgcagccctggacttcaagaatgtctccatcgtggcctgttacatttatgagcaa
accaagaatgctcagttcatctccctgaggaacatgtttgagattgctgaccgtctgatc
ggcatctacaaaacccacaacaccaccgagtgggggaatcaactcgaaaaccattgtctt
caaacagacaatctcagcttagaacagcagtga
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integrated database retrieval system
