KEGG   Oncorhynchus keta (chum salmon): 118396211
Entry
118396211         CDS       T09424                                 
Symbol
itga11b
Name
(RefSeq) integrin alpha-11 isoform X1
  KO
K06587  integrin alpha 11
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
oke04810  Regulation of actin cytoskeleton
oke04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118396211 (itga11b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118396211 (itga11b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118396211 (itga11b)
   04810 Regulation of actin cytoskeleton
    118396211 (itga11b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118396211 (itga11b)
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin alpha subunits
   118396211 (itga11b)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 118396211
NCBI-ProteinID: XP_052321354
LinkDB
Position
17:8474564..8566370
AA seq 1189 aa
MEYYCSLLLWTCALLPGLRHCFNFDTKKYKIIEGSKEAQFGYTVQQHEAGGRKWLLVGAP
FETSGQHQTGDIYKCPMDTSPNTNCTRLNLGKVSLNNVSERKDKMRLGMTLTSNPKDNSF
VTCGPLWSYECGSSYYSTGICSRVNESFKFSKTISPAFQRCETYMDIMIVLDGSNSIYPW
YEVQDFLINILQKFYIGPGQIQVGVVQYGSRVVHEFTLNDFRSVEEVVEAAKTIDQRGGE
ETRTALGINVARTEGFKRGGRKGAKKVMLVITDGESHDSPDLQKAMEDTEADNITMYAIA
VLGYYNRRGINPEAFLKEIKYIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGVNPN
GTGFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVVPPKSSYLEEFPEEL
KNHGAYLGYTVNSVVSAKGRQLYVAGAPRFNHTGKVIIFTLRNNGNLTILHSLKGQQIGS
YYGSELAPLDIDGDGVTDFLLVAAPMFFSKGWERGKVYIYRVTQQNHFLLEGTLEVSDQS
QNSRFGGAMAPIPDMNGDSYSEVVVGAPLEDDHQGAIYLFYGQLSGIEHKYRQRIGAAGF
SAGLQYFGRSVHGMMDVNEDGLVDLAVGALGAAVLIWSRSVVRIQGKMTFEPEKINTFNK
DCRRGGKDVTCMSAIVCISLDARTRMQSHGVGVWYRVLIDERRHPPRASLDDNDRQQQSR
NLTLQRGEESCEHVHFYVQETADYGHPIVFVVKVGLQSPDQGPVLDHGWPTTFRTEIPFW
NGCEGDDSCVPDLILHSRTDLLDRRQFCRPRERAAWALCHHQGASVGSERVVEASRRRLV
VEARLENQGENAYGTTLNISHSHNLLFSSLIVKDHSDIQIECRAEDRERSDRTCNVSSPF
MRSLTQVSFRLEFELSHSVFLDHVRVVLQAASDGEEMSPEDNINNIFHPLKYEADLLFTR
DSKPPRFEINSDHYRNKPGSSGPMFNLTYHIQNLGFFPVTDLQFAVDVFAVTKSGNHLFQ
IANIDTDQAVSSNCVLPHHMTPNHVFPEDLSHVPQLNHSNSMTLPMQCRLNVPAYREVRV
TVRGRLHLQALFAVKFKTLELVTAASIELSPSSPVFLHEERPTRHIILEMRKEEDYKIPI
WIIVGSTLGGLLLLSLLILALWKLGFFNRQKQREEEEEQVANGKMPEER
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggaatactactgcagcctgctgctgtggacctgtgccctcctgccaggccttcggcac
tgcttcaattttgacacaaagaagtacaagatcattgaaggctccaaagaggcccagttt
gggtacacagtgcagcagcatgaggcaggaggacggaagtggctactagttggagctccc
tttgaaaccagtggccaacaccaaacaggcgatatatacaaatgcccgatggacaccagt
cccaacaccaactgcactagactcaacctaggaaaggtatccctgaacaatgtgtcagag
cgcaaggacaaaatgaggctgggcatgacactgacctccaaccctaaggacaacagcttt
gtgacctgtggtcctctgtggtcgtacgaatgtggaagctcctactacagcacaggcatc
tgctccagggttaacgaaagcttcaagttctccaaaaccatctcgccggcctttcagagg
tgcgagacctacatggacataatgattgtcctggacgggtccaactccatctacccctgg
tatgaggtgcaggacttcctcatcaacattctgcagaagttctacattgggccaggtcag
atccaggttggagtggtgcagtatgggtcgagggtggtccatgagttcaccctgaatgac
tttcgctctgtggaggaggtggtagaagcagccaagaccatcgaccaacgtggaggggag
gagacacgcacggccctgggcatcaatgtggcacggacggagggatttaaacggggaggt
cggaaaggggctaagaaagtgatgctcgtgatcacggatggtgaatcccacgacagccct
gacctgcagaaggccatggaggacactgaggcggacaacatcaccatgtatgccatcgct
gtattgggctactacaatcggcgcgggataaacccagaggccttcttgaaagagatcaaa
tatatcgccagcgatcctgacgacaaacacttcttcaatgtgactgatgagtcggcgcta
aaggacatagtggatgccctgggagagaggatcttcagtctcgagggagtgaaccctaac
gggacggggttcggtctgcagatgtctcaggcaggcttctcatcacacatagtggaggat
ggcatattggtgggggccgtgggggcctatgactggaacggggctgttctgaaagagaca
cgtcatgggaaggtagtcccacccaagtcctcctatctagaagagttcccagaagaactg
aagaaccatggggcctacttgggttacacagtaaattcagtggtgtcggccaaaggcagg
cagctctatgttgctggagcccctcgcttcaaccacacaggcaaagtcatcatctttacc
ctgagaaacaatggcaacctcaccatcctacactcactcaaaggccagcagattgggtca
tactacgggagtgagctagctcctctggacatcgatggggacggtgtgacagacttcctc
ctggtggcagcgcccatgttcttcagtaagggctgggagaggggcaaggtctacatctac
agggtgactcagcagaaccatttccttttggaagggacacttgaggtctccgaccagtcc
cagaactctcgttttggtggagcgatggcccctatccctgatatgaatggtgactcgtac
agtgaggtagtggtgggagctcctctagaggacgatcaccagggggccatctacctgttc
tacggccagctcagtggcatagaacacaaatacagacagagaattggagcagcaggcttc
tctgctggtctgcagtattttggccgcagtgttcatgggatgatggatgtcaatgaagac
gggttggtggacttggcagtgggcgcattaggtgcagcagtactgatctggtctcgcagt
gtggtgcgcatccaaggaaaaatgacttttgaaccggaaaagatcaacaccttcaacaag
gactgccgcaggggaggcaaggacgtcacctgcatgtctgccatcgtgtgtatcagtctg
gatgccaggactcggatgcagagccatggagtgggtgtgtggtacagggtgctgatagac
gagaggaggcaccctcccagagcatcgctggacgacaatgacagacaacagcagtcaagg
aatctgacactacaacgcggggaggagtcctgtgaacatgtccacttctatgttcaggaa
actgcagactacggccatcccatagtgtttgtggtgaaggtaggtctgcagagtccagac
caaggcccggtgctggaccacggctggcccactacctttaggactgagatccctttctgg
aatggctgcgagggggatgacagctgtgtccctgacctcatcctgcacagtcggacagac
cttctagaccgcaggcagttctgtaggccaagggagcgggccgcatgggcgctgtgtcac
caccagggggcctcggtgggctcggagcgagtggtggaggcatcacgcaggaggctggtg
gtagaagctcgtctggagaaccaaggagagaacgcctatggcaccacgctcaacatctcc
cactcccacaacctgctcttctccagtctcatagtcaaggaccactcagacatccagatt
gaatgtcgtgctgaagacagggagaggagcgataggacctgcaatgtcagctcacccttt
atgaggtcactgacccaggtgtctttccggctggagtttgagttgagtcactctgtcttc
ctggaccatgtgagggttgtcctgcaggctgccagtgatggggaggagatgagcccagag
gacaacatcaacaacatatttcatcctctgaagtacgaggcagacctcctgttcacaagg
gactccaagcctcctcgttttgagatcaactcagaccactaccggaacaaacccggcagc
agtggtccaatgtttaaccttacttatcacatccagaatctgggcttcttcccagtgaca
gacttgcagttcgctgttgacgtgtttgctgttacaaagagtggtaaccatctcttccag
attgccaatatcgacactgaccaggcggttagctctaactgtgtcctcccacatcacatg
actccaaaccatgttttccctgaagatctctcacacgtcccacagctgaatcactccaac
agcatgacgttgccaatgcagtgcagactcaacgtgcctgcgtacagggaggtcagagtg
acagtcagggggcgtctgcacctccaagctctctttgctgtgaagtttaaaactctggag
ttggtgacagcagcctccatagaactgagtccgtccagtcccgtgttcctgcatgaggag
aggccaacacgacacataatcctggagatgagaaaggaggaagattacaaaattcccatc
tggattatagtagggagcacgctgggtggtctgctgctgctatccttgctcatcctggct
ctatggaagctgggcttcttcaacaggcagaaacagagggaggaagaggaggagcaagta
gccaacgggaagatgccagaggagcggtaa

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