Oncorhynchus keta (chum salmon): 118396246
Help
Entry
118396246 CDS
T09424
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118396246
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118396246
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118396246
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
118396246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
CorA
Motif
Other DBs
NCBI-GeneID:
118396246
NCBI-ProteinID:
XP_052321688
LinkDB
All DBs
Position
17:complement(24192735..24271886)
Genome browser
AA seq
1158 aa
AA seq
DB search
MYSGYGGSPSRAVSSMSLSMRSSRRVLSRSITRSQSFAGVNSYDKPYRNLSAFSTLGVTR
KPSRVSRMFTLSAKSPPPKVPQPERLDEVYEALKRGLQSYLQVHQMELDSLSQQMRESKR
NSRLGFLYELDKQVKVNERFMRRLEFHLSKVDELYEAYCMQRRLRDGANKMVKAYTDSQV
SREARESLSEANKGYKEYTENMCMLESELENQLGEFHVKMKGLAGFARLCAGDTYEILMK
YGRQRWKLRGRIEINCKQVWDSEDMIFLPLITEFLSIKVTELKSLANHVVVGNVSCETKD
LFAALPQTVAVDINDLGTIKLSLEVTWNPFDKDDQASTASTVNKPPTVNKRFSTYNQSPP
DTPSLREQAFYTAPRSLSSSMMPPKQRWSLLDVFRDTLVERLSQSCSCSDVSSVHLASAN
MQTDNMLRRQEDMENGTAWSNSSESSDDSSSPQLSLGLRHTNKNLVQPEVNVSTPSIEIS
FALRDTATSTPTHLAKQEDVQEETQKESSDIGAAGKDEASGKQAVPNGHARYSRSLSHIS
ENSADGVLIDRSTSEFVEPSEVTSLQCGICINDIEMVIPARAEWALIPGETVVVRDPPEQ
PAPATVTMEESRPESRYSAVSIESDTGLEAVSEVEPELQSAVPTRTDTLYQQGASLNPRP
DSQAQTQSTEGISFSAHRAVLVEAKKPEAVVAKPTDCKKQQAVDSGIEEALSAVISSLDD
YRGQFPELQVLEQELQLLEETLTCILKGRTCSRSSSVQSLTVETALGSFDFLNTSDLEDE
DEENCEKRSVMDSEHHSAPGRPSEESAGGDEDCEKRCWESPSYGPVSTGCQALDHALLVH
LKNCSAQLLRLGTFGPLRCGEMYALDRLLREARVLELIRHVAKETPGGATQADEVVPQLE
QCQGATLLWQQCTDNGSVYSTSTDAFLTTLAAAYTNRLPERGASLADTVFLRLVERILER
RLPKRGGQAAREMLTLFQFWSYLEAEGVSELDTHITELAEEVWLVQSLQSGDQEVLVKAL
KRPPESSLKREGMHAVSLLLRDPRGKVSASASSLLRSLANQPRHRERALVSCLELLENES
METRVCGCKALACLKAKESIDQLVYLCRSDKEDVRDAAKQALLVLGEDGKLAHRHVETSL
QEGVPRLFSPGSMTSTSF
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggatatggagggagtccctccagagctgtgtcctccatgtccctttccatg
cgctcgtcgcgccgagtcctttccagatccatcactaggagccagtcctttgctggggtc
aactcctacgataagccctacagaaacctatcagcgttcagcaccctgggggtcaccagg
aagccctccagagtcagcaggatgttcaccctctctgctaaatcaccaccgcccaaggtg
ccccagcctgagaggctagacgaagtctatgaggctctgaagagaggcctgcagtcttac
ctgcaggtgcaccagatggagctggacagcctgagccaacagatgagggagtccaagagg
aactctcgcctggggtttctctatgagctggataagcaagtaaaagtgaatgagaggttc
atgcgacggcttgagttccatctaagcaaggttgacgagctgtatgaggcctactgtatg
cagcgccggctgagagatggtgccaataaaatggtgaaggcctacacagactcccaggtc
agccgcgaggccagagagagcctgtctgaggccaacaagggctacaaagagtacacagag
aacatgtgcatgttggagagcgagctggaaaaccagctgggagagttccatgtgaaaatg
aagggtctcgcagggttcgcacggctgtgtgctggagacacatatgagatcttaatgaag
tatgggcggcagcgctggaagctgaggggaaggattgagatcaactgcaagcaggtgtgg
gacagcgaggacatgatcttcctgcctctcatcacagagttcctatcaataaaggtgaca
gagctgaagagcctggccaatcacgtggtggtgggaaacgtgtcgtgtgagaccaaggac
ctgtttgctgctttaccccagacggtggcagtggacatcaatgacctggggaccatcaaa
ctgagcttggaggtcacctggaaccccttcgacaaggatgaccaagcctcgaccgccagc
acggtcaacaaaccccccacggtgaacaaacgcttctccacctacaaccagagtcctcct
gataccccctccctacgggaacaggccttctatactgctccgaggagcctgtcaagcagc
atgatgccccccaaacagcgctggtcccttctggatgtgtttcgtgacacgctggttgag
agactgtctcagagctgctcctgcagtgacgtctcttcagtccacctggcctctgctaac
atgcagactgacaacatgctgaggaggcaggaagatatggagaatggcacagcatggtct
aactcctctgagtcatcagatgactcatccagccctcaactctccctggggctgcgtcac
accaacaagaacctggtccagccagaggtcaatgtctccacaccctccattgaaatctcc
tttgccctccgagacactgccacctccacccctacccacttagccaaacaggaggatgtg
caggaggagacgcagaaggagtcgtcagacattggggcagcggggaaagatgaggcttct
gggaaacaggcagtgcctaacggccacgcccgctactcacgctcactcagccatatcagt
gagaacagtgccgatggcgtactgatagaccggtcaaccagtgaatttgtggagccctct
gaggtcacctccctgcagtgtgggatctgtataaacgatattgagatggtgatacctgcc
agggcagagtgggcccttatcccaggagagactgtggtggtcagagacccccctgagcaa
cccgccccagctactgtgaccatggaggagagcaggccggagagcaggtattctgcagtg
tctatagagtccgacacagggttagaggctgtttcagaagtagagccagaacttcagagc
gctgtacccactaggactgatacattgtatcagcaaggtgcctctctgaatcccagacca
gactcacaagcacagacccagagcactgagggcatatcattcagtgcccacagggcagtg
ttggtggaggccaagaagcctgaggctgtagtagccaagcccacagactgtaagaagcag
caggctgtggacagtggaattgaggaagccctgagtgcagtcatctcctctctggatgac
tacaggggacagtttcctgagttacaggtcctggagcaggagttacaactactggaggag
acattaacatgtattctgaagggccgcacctgcagtcgttcgtccagtgtccagagtctg
acggtggagacagccctgggcagctttgactttctcaacacctcagacctggaggatgaa
gatgaggagaactgtgagaagaggagtgtgatggacagtgagcaccacagtgcccccggc
aggccatcagaggagagtgcagggggagatgaagactgtgagaagagatgctgggagtcc
ccctcctatggacctgtgagcactggctgccaagctctagaccacgccctactggttcat
ctgaagaattgcagcgcccaacttctgaggctggggacctttgggcctctgcgctgtggg
gagatgtatgctctggaccgcctactcagggaggcccgcgtcctcgagcttatcagacat
gttgccaaggagacccctggaggagccactcaggcagatgaggttgttccccagttagaa
cagtgccaaggggcaacattactatggcaacagtgtacagacaatggcagtgtgtacagc
acctccacagacgctttcctcacaacactggctgctgcttacaccaacagactgcccgag
agaggagccagcctggcagacacagtgttcttgcgtctggtggagaggattctggagagg
aggttgcccaagcgtgggggccaggcagccagagagatgctgactctcttccagttctgg
agctacctggaggcagagggagtgagcgagctggacacacacatcactgaactggcagag
gaggtctggctggttcagagcctgcagtcaggagaccaggaggtgctggtgaaggccctg
aagaggcctccagagagcagcctgaagagggaggggatgcatgctgtcagcctgctgctc
agggacccccgggggaaggtgtctgcctctgccagctccctgctccggagcctagccaac
caaccacgccatcgagagagggccctggtaagctgtctggagcttctggagaatgaaagc
atggagacgagagtgtgtggctgtaaagcacttgcatgtctgaaggccaaagagagcatc
gaccagctggtctatctctgtcgttcggacaaggaggacgtgagggatgctgccaaacaa
gctttgttggtgcttggtgaggatgggaagttggcccacagacacgttgagacatctctg
caggaaggagtgccacgtctcttctcccctggcagcatgaccagcacctccttctaa
DBGET
integrated database retrieval system
