Oncorhynchus keta (chum salmon): 118396311
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Entry
118396311 CDS
T09424
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118396311
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118396311
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
118396311
NCBI-ProteinID:
XP_035646318
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All DBs
Position
17:4482661..4484877
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AA seq
311 aa
AA seq
DB search
MVNMYNIMEHQLKSSGPSHHLGTGMPPANGGGGHGGGHTGSKPPAIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKLMPKNNTLAAQYQMSAGNHLLSASTAQGQGGNPRIDSYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSVAQAQAYMNGANAYSPMSYSSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGTHNHHQAQRGPQVQGDHLRDMISMYMPGGDASDAQRGYSASAANIQQH
YLGGSAPLTHL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatggaacaccaactcaagtcctctggtccctcgcatcat
cttggaacagggatgccacctgccaatggaggaggggggcacgggggcggccacacagga
tccaaaccaccggcaatccaacccgacccgatggacaaagtcaagcggcccatgaatgcc
ttcatggtatggtctcgcggtgagcgacggaaaatggcccaggagaatcccaaaatgcac
aattctgagatatccaaacgactgggtgtcgcgtggaaatctctgacagacgcagagaaa
aggcccttcattgacgaggccaagcgcctccgcgcggtgcacatgaaggattatccagac
tataaatacaaaccccgtcgtaaaaccaaactaatgccgaagaacaatactctagccgcg
cagtatcagatgtcggctggtaaccacctgctgagtgcgtccacggctcagggacaaggt
ggaaaccccagaatcgacagttatggctggggccacaccgggggctacacagcggcgatg
cagagcgaggcgctcggctacagccagcaacttcaccgctatgacctgtcagcacttcag
tatcagtccagcgtggcccaggcgcaggcctacatgaatggtgccaacgcatacagcccc
atgtcctacagcagcagcccccagcaggtcagcccagtgatgtctatggtgaagcagcag
tctgatggccacagcatgtccccctcccctacggggacccacaaccaccaccaggcccag
cgtggtccccaggtccagggggaccatctcagagacatgatcagcatgtacatgcctggg
ggagatgcctcagatgcccagagggggtactctgcctcggcagctaacatccagcagcat
tacctgggagggtcagctccactcacccacctttga
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