Oncorhynchus keta (chum salmon): 118396325
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Entry
118396325 CDS
T09424
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118396325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118396325
03036 Chromosome and associated proteins [BR:
oke03036
]
118396325
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118396325
Coactivators
SAGA/TFTC/STAGA complex
118396325
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118396325
STAGA complex
118396325
TFTC complex
118396325
SAGA complex
118396325
SLIK complex
118396325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
118396325
NCBI-ProteinID:
XP_052321298
LinkDB
All DBs
Position
17:5260970..5273140
Genome browser
AA seq
639 aa
AA seq
DB search
MAEERRPKQCTVVLPTESMKAMAESIGVGQLQEESCAALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKAESTEPLKVVKPGQEEEGSIQK
GQGAISAEAKGKKEGLMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATD
PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVV
TCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDEKTQ
WTTRYGCIAGLSELGPDVIKTLILPRLTVEGARIKAVSEGPVVSNIDKIGADHVQSLLLK
HCASVIAKTRPLPDNMEQYRTDYGYLGPTLCSHVVKARAQAALQAQQVNRTTLTITQPRP
TLTVSQSGIGGSGGSRSPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGASSTQ
QVITLSSSSGSSVTSTVASATSTLQPLVKLESRGAGGLGGSRPLQKYIVVSLPTSASSSL
ESKSGMLPPSSSSTSPISLEAGMKMDRSDSPGASTQSPH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcggaggccgaagcagtgcactgtggttctgcccactgagtccatgaag
gccatggcagagtccataggagtggggcagctacaggaggagagctgtgccgccctgagc
gaggaggtcagctacagaataaaggagatcgcccaggacgcgttgaagttcatgcaccac
ggaaagagacgtaaactgacgacaagcgacatagatcatgctcttaaactgaagaatgta
gagcctctgtatgggttccagtcgcaggagttcatcccgttccgctttgccagcggagga
gggagggagcttcacttctacgaggagaaggaggtggaccttagtgacatcatcaacaca
cccctccctagagtcccacttgacgtttcactcaaagctcactggttaagtattgaaggt
gtccagcctgctataccagaaaacccacccccagcccccaaagagcagcagaaggctgag
tctacagagcccctcaaggtggtcaagcctggtcaggaggaggagggctccatccagaag
ggccagggagctatatctgcagaggctaaaggtaagaaggagggtctgatgaggatgaag
ccccgcagtactcacgagctctcagtggaacagcagctctactacaaggagatcacggag
gcctgcgtcgggtcctgtgaggccaagagagctgaggctctacagagtattgctacagac
cctgggctctaccagatgctccccagattcagcacatttatctctgagggggtccgtgtg
aacgtggtgcagaacaacctggccctgctcatctacctgatgaggatggtcaaggccctc
atggacaaccccacactctacctagagaaatatctgcatgagttgatcccagcggtggtg
acgtgtatagtgagtaagcagctgtgtttgcggcctgacgtggacaaccactgggctctg
agggacttcgctgcccgtctgatggcccagagctgtaagaccttcagcaccaccaccaac
aacatccagtcacgcatcaccaagaccttcaccaagagctggttggatgagaagacccag
tggacgacacggtatggttgcatcgctggactgtctgaactaggacctgacgtgatcaag
acgttgatcctgcccaggctcactgtagaaggagctcgtatcaaagctgtgtctgaggga
cctgtggtctccaacatcgataagataggagccgaccacgtccaaagccttctactgaaa
cactgtgccagcgttatcgccaagactcgtcccctgcctgacaacatggagcagtaccgg
acagactatggttacctggggcccacgctctgttcccacgtggttaaagcccgggcccag
gcagcactacaggcccagcaggtcaacagaaccacacttaccatcacacagcctcggccc
accctgacggtgtctcagagcgggataggagggtcgggggggtcccgttcccccagcatc
atcaaggttcccagctccctcaccctcatgtccacccgaccaggcaccccaacacagcca
tcgccaccggcaaccaagtacatcgtcatggcaaccagtgcaggggcgtcctccacccag
caggtgatcaccctgagttcctcctcgggctcctcggtaaccagcacggttgccagcgct
acctccaccctgcagcctctggtcaagctggagtccagaggggccggtggcctcgggggg
tcgcgacccctccagaagtacattgtggtgtctctccccacgtccgcctcttcctccctg
gagagtaagagtggcatgctccccccctcctcttcctccacctctcccatctcgctggag
gccggaatgaagatggatcgctcagactctcccggggccagcacacagtccccgcactaa
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