Oncorhynchus keta (chum salmon): 118396341
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Entry
118396341 CDS
T09424
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118396341 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118396341 (snupn)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
118396341 (snupn)
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
118396341
NCBI-ProteinID:
XP_035646364
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All DBs
Position
17:7256442..7283919
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AA seq
381 aa
AA seq
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MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGTDSDEEAVVVDRKEEEQQKEKDAEDDGMEIERKKLPKYYANQLMLSEW
LVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADIAKRNP
FKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDIL
GMEVPLGPLTAKPEYASHQLAQIREHKKTSDHVRPGDLNGRYELEHLSTPDQEKGDGDTA
TSPRSRPLKESRMETSEKSTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctaacccaagctctctcggccagcttcgccgtctcgaaggaggccaacagc
acagcggccccccacccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgaacgacgacggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacagggacagatagtgatgaggaagcagtg
gtggtggacagaaaggaggaggaacagcagaaggagaaggatgcagaggatgatgggatg
gagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagagtgg
ctagtggacgtccctcaggaactggatactgattggctcatggtggtctgtcccgtgggg
aagcgctctctcatcgtcgcctccaaggggtccactgcagcatataccaaaagtggctac
tgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactcagcaatggga
aaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatcctg
gatgtcatgtgttggaggggccatcctgtgtacgactgtccaacagagttccggttctac
tggctccagtcgaaagtccaggagacggatggcatggctgacattgccaagaggaaccct
ttcaagtttgtgagtcttcaaagcactgcctgctcaacggaagccattcagcaagcactt
gcaacagagtacaacttcaatgtggacggacttctgttttaccaccggcagacccactac
acccccggcagcacccctctggtgggctggctgcggccctacatggtcgtcgatatcctg
ggcatggaggtcccgttggggcccctcaccgccaagcccgagtatgccagccaccagctg
gcccagatccgggagcacaagaagacctccgaccatgtccggccaggggacctgaacggc
cgctacgagctggagcacctatccacccccgaccaggaaaagggagatggcgacaccgcc
acctcgccccgcagcagaccgcttaaggaatctcgcatggagacctcagagaagagcacg
agttga
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