KEGG   Oncorhynchus keta (chum salmon): 118396341
Entry
118396341         CDS       T09424                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118396341 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118396341 (snupn)
Spliceosome [BR:oke03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    118396341 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme DNA_ligase_A_M
Other DBs
NCBI-GeneID: 118396341
NCBI-ProteinID: XP_035646364
LinkDB
Position
17:7256442..7283919
AA seq 381 aa
MDDLTQALSASFAVSKEANSTAAPHPRMAQYKTKFSVLEQSERRRRFLDLQKTKRLNYVN
HARRLADGDWTGTDSDEEAVVVDRKEEEQQKEKDAEDDGMEIERKKLPKYYANQLMLSEW
LVDVPQELDTDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVERTYFILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGMADIAKRNP
FKFVSLQSTACSTEAIQQALATEYNFNVDGLLFYHRQTHYTPGSTPLVGWLRPYMVVDIL
GMEVPLGPLTAKPEYASHQLAQIREHKKTSDHVRPGDLNGRYELEHLSTPDQEKGDGDTA
TSPRSRPLKESRMETSEKSTS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggatgacctaacccaagctctctcggccagcttcgccgtctcgaaggaggccaacagc
acagcggccccccacccacggatggcccagtacaagaccaagttcagcgttttggagcaa
agcgaacgacgacggcgctttctagatctgcagaaaacgaaaaggctgaattatgtcaac
catgcacgccgtctggctgatggggactggacagggacagatagtgatgaggaagcagtg
gtggtggacagaaaggaggaggaacagcagaaggagaaggatgcagaggatgatgggatg
gagattgagaggaagaagttgccaaagtactatgccaaccagctcatgctgtcagagtgg
ctagtggacgtccctcaggaactggatactgattggctcatggtggtctgtcccgtgggg
aagcgctctctcatcgtcgcctccaaggggtccactgcagcatataccaaaagtggctac
tgtgtgaaccgcttcccttctctgttgcctggagggaacagacacaactcagcaatggga
aaagattacaccatcctggactgtatctacagtgaggtggagcggacctacttcatcctg
gatgtcatgtgttggaggggccatcctgtgtacgactgtccaacagagttccggttctac
tggctccagtcgaaagtccaggagacggatggcatggctgacattgccaagaggaaccct
ttcaagtttgtgagtcttcaaagcactgcctgctcaacggaagccattcagcaagcactt
gcaacagagtacaacttcaatgtggacggacttctgttttaccaccggcagacccactac
acccccggcagcacccctctggtgggctggctgcggccctacatggtcgtcgatatcctg
ggcatggaggtcccgttggggcccctcaccgccaagcccgagtatgccagccaccagctg
gcccagatccgggagcacaagaagacctccgaccatgtccggccaggggacctgaacggc
cgctacgagctggagcacctatccacccccgaccaggaaaagggagatggcgacaccgcc
acctcgccccgcagcagaccgcttaaggaatctcgcatggagacctcagagaagagcacg
agttga

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