Oncorhynchus keta (chum salmon): 118396344
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Entry
118396344 CDS
T09424
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118396344 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118396344 (sin3aa)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118396344 (sin3aa)
REST complex
118396344 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118396344 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
118396344
NCBI-ProteinID:
XP_035646366
LinkDB
All DBs
Position
17:7368464..7401725
Genome browser
AA seq
1269 aa
AA seq
DB search
MKRRLEEQEPVFASQQRRLTCSTEAFQHRVLAPAPAAYEAVGDSMQPTAGNIQYSVPQGY
QVPTVPQNSSGHVHTPSPTVHHHSPAVQPHGPPVMQCHAHPPASAQGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVATNDLVNVTTPGQIHHITPHGISVSQIPLSGPPTPHQPQVPAPTTTSAPSPPT
QPTPTKMSKQPLQSPVLTPSSQPNPSIPAYASPQSPTLQPHTPISGTPNAPPLQNNQPVE
FNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVA
RLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKLQLNNKQRPNQNG
CQIRMLSGTVATPPVKKKPKLLNLKDSSLVEASKHGDGTESLFFEKVRKALRSAEAYDNF
LRCLVIFNQEVISRAELVQLVLPFLGRFPELFNWFKNFLGYREMSHTERYPKERALEGIA
MEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRMSAEEQAKFRLDNTLGGSSEV
IHRKAIQRIYGDKAPDIIDGLKRNPAISVPIVLKRLKTKEEEWREAQRGFNKIWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQASEENTAMPTGPHLTLTYKD
SQILEDAAALIIYHVKRQTGIQKEDKYKIKQIIHHLIPDMLFAQRGELSDLEEEEEEEME
LDEAVAKKHNGVTQGGSPNKSSKLLFCNTGAQKLRSCTEAYNLFYVNNNWYIFLRLHQTL
CSRLMRIYGQAERQIEEDIRERNWEREVLGLKRDKNDNPAIQLRLKEPMDIEVEDYYSAF
LEMVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQSIARQLQHIVSDEICVQVTD
LYLAESTNGATGGPLPTQTSRASTEGCYQRKAEQIMSDENCFKLMFLKNRGHVQLTVELL
DTEEENSDEPMEAERWSDYVGRYLNSDSTSPELREHLAQKPVFLPRNLRRIRKYQRGREQ
LEKEASEGEKKSTENAENLKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVST
RLHKRFQAWVDFWVKEHVTRDMAAETNKWLMGEGRDGLVPCTTTRELEILHFMNINKYRV
KYGSPFKAP
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcgcttggaggaacaggaaccggtatttgcgtcccaacagcggcgcctcacc
tgcagcacggaggctttccagcaccgtgtcctggccccggcgcctgccgcatacgaggcg
gtgggcgacagcatgcagcctacggcaggcaacattcagtattctgtcccacagggctac
caggtccccacggtgccacagaactcgagtggtcatgtgcacacccctagcccaacggta
caccaccacagcccagcggtccagccccacgggccccctgtgatgcagtgccacgctcac
ccccctgcctcagcccagggccagcagcaattccagaggctcaaggtggaagatgctttg
tcttacctggaccaagtgaaactccagtttggcaaccaacctcaagtctacaatgacttc
ctggacatcatgaaggagttcaagtctcaaagcattgacactccaggggtgataagcagg
gtatcccagctcttcaaaggccaccccgacctcattatgggattcaacaccttcctgcca
ccgggctacaagatcgaggttgcgaccaacgacctagtcaatgtaaccacgccgggtcag
atccaccacatcacccctcacggcatttctgtctcacaaatccccctgtcgggaccaccc
accccgcaccagccccaggtgccagcccccaccaccacctctgcaccatcccctcccaca
cagccaacccctaccaagatgagcaagcagccactgcaatctccagtcctcacgccaagc
agccagcccaatccgtccatccccgcctatgcctccccccaatccccaaccctgcagccc
cacacaccgatcagtggcacgcccaatgcccctccgctgcagaacaaccagcctgtggag
ttcaatcatgccatcaactacgtcaacaagatcaagaaccgtttccagggtcagccggac
atctacaaagccttcctggagatcctgcacacctaccagaaggagcagcggaatgctaag
gaggcaggagggaactacaccccagccctgacagagcaggaggtctatgcccaggtggcc
cggctcttcaagaaccaggaggaccttctctctgagtttggccagttcttaccagatgcc
aacagctcggtgctgttaagcaagacgacagcagaaaaggcggagtctgtgcggaatgac
cacggtggcacagcgaagaagctgcagctcaacaacaaacagaggcccaatcagaacggt
tgccagatccgcatgctctctgggacggttgccacaccccctgtcaagaagaagcccaag
ttactgaatttgaaagactcgtccctggtagaagccagcaaacatggagatggcacagaa
tctctgttctttgagaaggtgcggaaggccttgcggagtgcagaggcctatgacaacttc
ctgcgttgtttggttatcttcaaccaagaggtcatctccagggctgagctggtgcaactg
gtgctacctttcctggggagattccctgaactgttcaattggttcaagaacttcctagga
taccgggaaatgtcccacactgagcgctatcccaaggagcgtgccttggagggcattgcc
atggagatagactatgcttcctgcaagagactgggctcgagctacagagcactgccgaag
agctacacgcagcccaagtgcaccgggagaacgccactgtgcaaagaggtcctcaatgac
acctgggtgtccttcccttcctggtctgaagactccacctttgtgagctccaaaaagacc
cagtatgaggagcacatctacagatgtgaggatgaacgcttcgagctggacgtggtgctg
gagaccaacctggccaccatccgcatgctggagaccgtacaaagaaaactgtcccgtatg
tctgccgaggagcaggctaagtttcgcctggacaacacgctgggaggctcctcggaagtc
atccatcgcaaggccatccagaggatatacggtgacaaggcccctgacatcatcgatggg
ctcaagaggaaccctgccatttctgttcccattgtgctgaagaggttaaagaccaaggag
gaggagtggcgggaagcccagaggggcttcaacaagatctggagggagcagaatgagaag
tactacttgaagtctctcgaccaccaaggtatcaacttcaaacagaacgacaccaaggtg
ctacgatccaagacactgctcaatgagattgagagcatctacgacgagcgacaggaacag
gcgtcggaggagaacaccgcgatgcccaccggcccccatctgactttgacctacaaggac
agccagatcctggaggatgctgccgccctcatcatctaccacgtcaagcggcagacgggc
atccagaaggaggataagtacaagatcaaacaaatcattcaccacttgatcccagacatg
ctgtttgcccagcgcggcgagctctcggacctggaggaagaagaggaagaggagatggag
ctggatgaggccgtggccaagaagcacaatggcgtcacgcaaggcggaagccccaacaag
tcctccaaactcctcttctgcaacactggtgcccagaagctgcgaagttgcaccgaggcc
tacaatctattttacgtcaacaataactggtacatcttcctgcggctgcaccagacactg
tgctcgcggctgatgcggatctacgggcaggcggagagacaaattgaggaggacatccgg
gagcgtaactgggagagagaggtgctgggcctcaagcgagacaagaatgacaaccctgcc
atccagctgagactgaaagagcccatggatatagaggtggaggactactactctgccttc
ctggagatggtgcggaaccttctggatggcaacatggagccggctcagtacgaggactcc
ctccgggagatgttcaccatccatgcctacaccgccttcaccatggacaaactcatccag
agcatcgccaggcagctccagcacatagtgagtgacgagatctgcgtgcaggtgacagac
ctgtacttagcagagagcaccaacggggccaccggaggtccccttcccacccagacatcc
agagcttccacagagggatgctaccagcgcaaggcggaacagatcatgtccgatgagaat
tgcttcaagcttatgtttctaaagaacagaggccatgttcaactgacagtggagcttctg
gacaccgaggaggagaactccgatgaacccatggaggcagagcgctggtcagattacgtg
ggtcgctacctgaattctgactctacctctccagagttgcgggaacaccttgctcagaaa
cctgtcttccttcccaggaacctccgtcggatacggaagtaccaaaggggtagggagcag
ctagagaaggaggccagcgagggagagaaaaagtccacggagaatgccgagaaccttaaa
atggaatgtatgttcaagctcaactcctataagatggtttatgtcttcaaatctgaggac
tacatgtaccgacgcactgccttgctgcgagctcaccagtcacacgagagagtgagcact
cgattgcacaagcgcttccaggcctgggtcgacttctgggtgaaggagcatgtcactcgc
gacatggccgctgagaccaacaagtggctgatgggagaggggcgcgacggtctggtgccg
tgcaccaccacccgcgagctggagatcctccacttcatgaacatcaacaagtaccgtgtc
aaatacggctcacccttcaaagcaccataa
DBGET
integrated database retrieval system
