Oncorhynchus keta (chum salmon): 118396394
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Entry
118396394 CDS
T09424
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118396394
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118396394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118396394
NCBI-ProteinID:
XP_052381250
LinkDB
All DBs
Position
1:complement(41327367..41401974)
Genome browser
AA seq
2194 aa
AA seq
DB search
MSSRRYANLFVLGVAFILFLTFSKLYGTLVRRSTHKRVHETQRRTASRYHHTTVNYHVYH
TQRRMPTTSKPTLKQKQFHFNGKKHWKYATNVTLQLNGPNVCGNRCCHGWTVSPKTQKCT
KSRCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGIPWALPCPTSPMVSTTTS
GLSITLPPTTSLSPTITLPPTTVTPTTTTPVSAETTATWRTAGTPASTTNPETKKYYAVR
WQPLTLQEAQLLLLKKALARGGRGDKMTTILMKHIETERKKLQSASQSDLHDTQTTSVKS
FHTQKGQYTVHASPPAASNQTAGHRGGTAAGAGRRGAERIKVLFTPTICKVRCTQGRCTN
FCEQGNVTTLYNSEQGGRAAPGPGFRVFLCPMLCQNGGVCIQKDRCVCPPTFTGKFCHIP
VATPSTNDIEKPPRIPSVLASQQLLTQSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHP
PEASVKIHQVLKVGYGPGTVREQSETVTWSAGLSGARTSVLPGERAEAPPPKPRVQAQTL
HGDSTYTESSGFKYCFREVRNGQCSSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNG
VDGSCPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGYILDASHGICIS
RKVISEDKGQCYRILNSGSGRGSCSVPILRNITKQICCCSRVGKAWGKNCERCPYFGSVA
FKEICPAGPGYHYSASAIKFNQRVVEQHGTGGPPVISQSTPQTRPQQPASSGAQTPQTSP
QQTSSSGFFTPQTRPQQPDGRALIPQTRPQQPSSGGSLSPQGRPHIPAISVTAGPTRVVT
ARTPTQTKRPPVDQRPISPVRPAQPLPSPVTPRPPIPRPVRGVCETMPQVCGQGRCVDQP
GGRHTCICNEGYQHNAQQTHCQDIDECRASPPPCGSGRCQNTEGGYRCSCPSGYQPGPRG
TSCIDVNECIQAPSPCSVGECENTPGRYRCVCPAGFRANIQQTQCQDIDECRQVPNPCNN
GRCENSPGSFKCVCRTGYKLEGNTCKDVDECEDPLKCPGQACVNSPGSYKCVSCPPGFGL
LNEQCRDVDECRQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKACTDVDECEDPLRCPGQ
ACVNSQGSYNCVSCKPGFSMINGQCSDIDECRQSPGPCTNGHCENTQGSYSCACLTGYRL
HGDTCTDADECADPSQCPGQECVNSQGSYKCVSCKPGFGLVDRRCTDVDECLHSPSRCAN
GRCENTAGSYKCACRSGFRLQGNTCTDVNECENALQCPGQECINSEGSFICVACSPGFEA
GNGQCTDIDECRQTSNLCANGLCENTLGSYRCVCRTGFKLQGSVCVDVDECADSSRCPGQ
RCVNSEGSYKCIACKAGHRMQDGLCADVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRT
TGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRCVCSQGYTTSSDGSSCLDVDECARSGP
GVCQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRTQRCENTIGSYRCIT
SCEPGYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYTATSDGKGCVDEN
ECETMQGVCGAARCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGLPVFSGGSSSSSST
TGLGPQRRPDTSQLPPARPGELRECYYNTEEQSSCSVLARNTTQQECCCTVGQGWGMGCQ
FDPCPQLDTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCVNNIPGYSCY
CTSGYYYDNVFLECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDDTQRSCVNST
GLAVDEKLSFCWQYVTPDLVCQSPLLGGQVTFTECCCLYGEGWGLQCALCPARDSEDYEA
RCNVFLRPPEFPPPFPDRYGPDPGPGRGGGGGYRVPYGPDSFPDPIPRRPEYPRPDYDDY
TPPGGSRSGFRGRTPSTFRVPESPYRQPSGYIPERYYDEDDYGPPDAPPRPPFRSLPDPR
SELSFGERPPIPEGLPLSLAPLPDSDPYSEEEEEGPEPWRVGPPFPDRRGPGGGPRRVYE
RQYEPYAGLSTEDCGILHGCENGRCIRVVEGYTCDCYEGYELDMTSMACIDINECEDPDN
VCASGQCINTDGSYRCVCHRGYVMSRRPNHCVAA
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaacttattcgttcttggggtggcatttattttatttctt
acattttcgaaattatatgggacactagtgaggcgttcaacccataaaagagtgcacgag
acgcagcggagaactgcgagcaggtaccaccatacgaccgttaattatcacgtttatcac
actcagcggaggatgccaacgacttcaaaacccacattaaaacagaaacagttccatttt
aatggaaagaaacactggaaatacgcaactaatgtgacactacagttaaacgggcctaat
gtatgtggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcacc
aaatcaaggtgccttccacgatgccacaacggagccgtgtgcaggcagcccaacatctgt
gaatgcagaacgggcttctacggggcccgctgtgagtttgcaagcgtgacctatggcctc
gtaggcattccctgggccttaccgtgccccaccagccccatggtcagcaccaccacctca
ggactaagcatcaccctcccaccaaccactagcctctcaccaaccatcaccctcccacca
accaccgtcacccccaccaccaccaccccagtttccgcagagaccacagctacatggagg
acagcggggacaccagccagcaccaccaacccagagaccaagaaatattacgctgtgcgc
tggcaacctcttactctgcaggaggcccagttactgctactaaagaaggcattggcccgt
ggcggtcgaggtgacaagatgaccaccatcctgatgaaacacatcgagacagagaggaag
aagctccaatcagcctcacagtcagacctacatgacacccagaccacaagtgtcaagagc
ttccacacccagaagggccagtacactgtccacgcgagccctcctgcagccagcaaccag
accgccggccaccgaggaggaacggcagccggggcaggaaggagaggagctgagcgcatc
aaggtgctcttcaccccgaccatctgcaaggtgcgctgcacccagggacgctgcaccaac
ttctgcgagcagggcaatgtgaccaccctctacaacagtgaacaggggggccgggctgcg
ccgggaccgggcttcagagtcttcctgtgccccatgttgtgtcaaaacggaggggtctgc
atccagaaggatcgctgcgtctgcccgccaaccttcaccggcaagttctgccacatcccc
gtggccacgccctccaccaatgacattgagaagcctccgcgcatcccctcagtgctggcc
agtcagcagctgctgacccagtcggaatacattctccccctgcagagccagcagcagagc
cacagtcagcccagcggtgcgtctggctcatccatggtcaaggtgcgggtgcagcacccc
ccagaggccagcgtgaagatccaccaggtgctgaaggtggggtatgggccaggcacagtt
agggagcagtcggagacggtcacctggtcagcaggcctctcgggggccaggaccagtgtt
ctgccaggggagcgggccgaagccccaccacccaaacccagagtccaggcccagacactc
cacggtgactccacctacacagaatcctccggattcaagtactgcttcagggaggtccgc
aacggccagtgcagctcacctctcccaggactcaggagtcaggacacctgctgccgaggg
attggactggcctggggcatcaacgagtgtgtcctatgtcctcctaacacaggaaatgga
gtcgatgggagctgtccggctggatttgagaggatcaacggcacccagtgtgttgatgtt
aatgagtgtttgcagccaggcttctgtgagaacggcaactgtgtgaacactcgggggagc
tacagttgtgtctgcaggcaaggatacatactggacgcctctcacgggatctgtatctcg
cgtaaggtgatctcggaggataagggccagtgctatcgtatcctaaactctggctctggc
cgtggtagctgctccgtgcccatcctcaggaacatcaccaagcagatctgctgctgcagc
cgcgtgggcaaggcctggggcaagaactgtgagaggtgtccctactttggatcagttgct
ttcaaggagatctgcccagcagggcctggctaccactactctgcctctgccatcaagttc
aaccagagggtggtggagcagcacgggactggaggtccccctgtcatatcccagagcacc
ccacagaccaggccacaacaaccagccagtagtggtgcacagactccccaaactagtccc
caacaaacttcaagctcaggctttttcactccccaaactagaccccaacagccagatggt
agagctctcatacctcagaccaggccccagcagccatcgagtggaggctcgctgtccccc
cagggcagaccacacatcccagccatctctgttacagcaggacccacccgggtggtgaca
gctcgaacccccactcagaccaaacggcctccagttgaccaacggccaatatctccagtg
agacccgcacagcccctcccatctccggtcacgccccgcccacccatccccaggccagtg
cggggtgtgtgtgagaccatgccccaggtgtgtggacagggccgctgtgtggaccagccc
ggagggagacatacctgcatctgtaacgagggataccaacacaacgctcagcagactcat
tgtcaagacatagacgagtgcagggcgtctcccccgccttgtggcagcggccgctgccag
aacacagaagggggctacaggtgcagctgcccctctggataccagccgggaccccggggc
accagctgtatagatgtcaatgagtgcatccaggctcccagtccctgttctgttggagag
tgtgagaatacaccaggccgctacagatgtgtgtgtcctgctggcttcagagccaacatc
caacagacgcagtgtcaagatattgacgagtgtcgtcaggttccgaacccctgtaacaac
ggccgctgtgagaatagccctggtagcttcaagtgtgtctgccgcactgggtacaagcta
gagggcaacacgtgtaaagatgtggatgagtgtgaggaccccttgaagtgtcctggtcag
gcctgtgtcaactctccaggatcatacaagtgtgtgtcttgcccaccagggtttgggctg
ctcaacgaacaatgccgagatgttgacgagtgtcgtcagacccccagcctttgcaccaat
ggtcgttgtgagaacactcccgggagctacaggtgtgtttgccatacgggatacaaacta
caaggcaaggcctgcacagatgtggatgagtgtgaggaccctttgaggtgtcctggtcag
gcctgtgtcaactctcagggttcttacaactgtgtgtcttgcaagccaggcttcagcatg
atcaatggacaatgctcagatatagatgagtgtcgtcaatcccccggcccatgcaccaat
ggtcactgcgagaacacccagggtagctacagctgtgcgtgtctcactggctacagacta
cacggtgatacctgtacagacgcggatgaatgtgcagacccgtcccagtgccctggccag
gagtgtgtcaactcccagggctcatacaagtgtgtgtcctgcaagccaggctttgggctg
gttgacagacgctgcacagatgttgacgagtgcctccacagcccatctcgctgtgctaac
ggtcgttgtgagaacacggctggaagctacaagtgtgcgtgccgatctggcttcaggtta
cagggcaacacctgcacagatgtcaatgaatgtgagaacgctctacagtgtcctggtcag
gagtgtatcaactctgagggctccttcatatgtgtggcctgtagcccaggctttgaggct
ggaaacggacagtgtacagatatcgatgagtgtcggcagacctccaacctatgtgccaac
ggcctctgtgaaaacactctcggtagctaccggtgcgtttgtcgcaccgggttcaaactg
cagggcagcgtctgtgttgacgttgatgaatgtgcagactcctcacggtgtcctgggcaa
cggtgtgtgaattctgaaggctcctacaagtgtatcgcctgcaaagcgggccacagaatg
caagatgggttatgcgcagatgtggatgaatgccagagccctgacacctgtggtgcagcg
aggctgtgtgtgaacacggacggctcctatcgctgtgactgtcaaccaggctacagaacc
actggccttggacgccaatgtcgagacgtcaacgagtgtctagagggggagtactgcttc
cccaggggagagtgtgtgaacacagagggctcctaccgctgtgtgtgttcccagggttac
accaccagcagcgacgggagctcctgcctagatgtggatgagtgtgccaggtcaggcccg
ggggtgtgccaggatgggcgctgtgtcaacacagagggctcctaccagtgccagtgccaa
gtgggattcaccaccaacccagagaagacagcctgtctggatgtagatgagtgctcagag
ggagcagtgtgtcggacacagcgttgtgagaacaccattggctcctaccgctgtatcacc
tcctgtgagccgggctaccgggtcacccgcaccggagagtgtgtcgatatcaatgagtgt
gccaatgagaccgtatgcggggagcatgcgttctgccagaacctaattggaacataccag
tgcatgtgtgaccagggctacacagccaccagcgatgggaagggatgtgtggatgaaaac
gagtgtgagacgatgcagggcgtgtgtggcgcggcgcgctgtgagaatgtggatggctcc
ttcatgtgtgagtgtccaggagagggggaagagtttgatacgcgctcaggacagtgcctc
agcacgccccgaccaggtcttccagtgttctctggcggctcctcctcgtcttcctccacc
accggcctcggtccccagcgtcggcccgatacgtcccagctgccccctgcccggcctggc
gagttgagggagtgttactacaacaccgaggagcagagctcgtgcagcgtcctggcccgc
aacaccacccagcaggagtgctgctgcaccgtgggccagggctggggaatgggctgccag
ttcgacccctgtcctcagctagacacagccgagcaccaggcgttgtgccccagcggacgg
ggatatgtgactgggccaggagcgtttagctacaaagatgtggatgagtgtaagctgttc
caccctgaggtgtgtaagagcggtgtatgtgtcaacaacatccctggctactcctgctac
tgcaccagtgggtactactatgacaacgtgtttctggagtgcatcgatgttgatgagtgt
gaggcaggggaggacagctgtccagggggaatctgcgtcaacacattaggctcacacttc
tgtacctgcgtgcctcctcttgtgttggacgacactcagcgcagctgtgtcaattccact
ggcctcgccgtggatgagaagctgtccttctgctggcagtatgtcacaccagacctggtg
tgtcagagccccctgctgggcggacaggtcaccttcactgagtgctgctgtctgtatgga
gagggctggggactgcagtgtgctctgtgtcctgccagagactcagaggactatgaggct
cggtgtaacgtcttcctgaggcccccagagtttcctccccccttccctgaccgctacggt
ccggacccagggccaggtagaggaggaggaggggggtaccgcgtgccctatggaccggac
tccttcccagaccccatcccccgcaggcctgagtacccccggcctgactatgacgactac
acaccaccagggggcagcaggtctggcttcagaggcagaacacccagcaccttcagggtc
ccagagagcccatacagacagccctcaggatacattcctgagcggtactatgacgaggac
gactacggcccacctgacgctcctccgagacctcccttccgcagcctcccagaccctcgt
tctgagctctcctttggggagcggccccccatccccgagggcctccctctgagtctggcc
cccctcccggacagtgacccctacagtgaggaggaggaggaggggccagaaccctggcgt
gtgggaccccctttccctgatagacgggggccaggtggaggcccaaggagagtctatgag
agacaatatgagccgtatgcaggcctgagcacagaggactgtgggatactgcacggctgt
gagaacggcaggtgtatccgggtggtggagggatacacgtgtgactgctacgagggatac
gagctggacatgacctccatggcctgcatagacatcaatgaatgtgaggatcctgacaac
gtatgtgcgagcggccaatgcatcaacacagacggctcctatcgctgtgtgtgtcaccgg
ggctacgtcatgtcccgccggcccaaccactgtgtggcagcataa
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