Oncorhynchus keta (chum salmon): 118396446
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Entry
118396446 CDS
T09424
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118396446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118396446
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
118396446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
nSTAND1
AAA_23
Beta-prop_IFT122_1st
TraD_N
Motif
Other DBs
NCBI-GeneID:
118396446
NCBI-ProteinID:
XP_052321445
LinkDB
All DBs
Position
17:11623296..11748461
Genome browser
AA seq
1604 aa
AA seq
DB search
MISRYKLSPGSNMSLAFCGNENNSLAYNVDSGVLNNGCFLDALNVVPHIFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFVLLFVLVCEIAEGVVSDGFTQSLHLHLYM
PAGLAFMAGITSIIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHGIGLRQLR
YGITGLLALIYGLLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITAAHRRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRRPLGSMPQDPKWIW
RALCQAFGRPLIISITFRFLADLLGFAGPLCISGIVHHISKENRTIQPPIKLLGVYFISS
QEFLANAYVLAVLLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMS
MGELTVGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVIMLYYLLGISALIGATVIA
VLAPVQYFVATKLSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEDTRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSAQKLSEFFSSDEIGDEQEPNATMPAGPSNHNSKYQAVPLKVV
NRKRPPREDCWNNYSQKGGDPPPQERDQDLCFRITSGYFTWTDGPPTLSNVDIKVPFGQL
TMIVGQVGCGKSSLLLAALGEMQKVSGTVTWNSLPNLDSEGDERYVSEGDESPTSDKDAA
GDGDIQKRGSVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGD
QTEIGERGIVLSGGQRQRIGVARALYQQANVVFLDDPFSALDIHLSDHLMQEGILKLLRE
EKRTVVLVTHKLQYLPHADWIVAMKNGTTQTEGTLKDIQNSEPELFEQWKTLMHRQDGEF
EKETVPESMTVLERKNLRRAMYSKEAAKTEEEDKEESVDSDEDDNLSQAMRHRTTIPWHS
CGVYLSSAGLLLLLLLLLSQLFKHSLMVAIDYWLAHWTSRVINAKMEATGRNCTAAQECV
FSHSWYLSVFSVLCCLGIILCLVTSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPL
GSILNRFSSDTNTIDQHIPATLECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFI
QKYFRVASRDLQQLEDSTQLPLLSHFSETVEGLTTIRAFKYEPKFRQRLLEFTDANNIAS
LFLTAANRWLEVRMEYIGACVVLIAAVASISNSLYNHLSTGLVGLGLTYALMVSNYLNWM
VRNLADMEVQLGSVKRINGLLQTEPENYEGLLTASQVPDGWPQQGEIQIENLSVRYDTTL
KPVLKQVNAHISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTL
RSRFSIILQDPILFSGTIRFNLDPEMKATDDMLWEALDIAQLKPVVKTLPGGLDATVTEG
GENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAH
RVHTILKADLVIVMKRGLILEYDRPQALLEKEDSVFASFVKADK
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgatacaaactgagtcccggttccaacatgtccttggcgttctgtgggaac
gagaacaactcgttggcgtacaacgtggacagcggcgttctcaacaacggctgcttcctg
gacgcgctcaacgtggtgccgcacatcttcctgctcttcattaccttccccatcctcttc
atcggctggggcagccagagctccaaggtgcacatccaccacagcacctggctgcacttc
cctggtcacaacctgcgctggctcctcaccttcgtcctcctcttcgtcctggtctgtgag
atcgcagagggcgtcgtctccgatgggttcacccagtcccttcacctgcacctgtacatg
cctgcaggcctggccttcatggcggggatcacctccatcatctactaccacaacatcgag
acctccaacttccccaagctactgctagccctactgttctactgggtcttggcctttctg
atgaaaaccatcaagtttgccaagtacactgagcacggcatcggcctgagacaactccgc
tacggcatcacaggactcctggccctgatctacggactactactggctgtggaaatcaac
gtcatactgggcaggcgctacctgtgtttcactgaagctacagaggtgaaacccccagag
gacctgcaggatctgggggtgaggttcctgcagccctttgtcaacctgctgtccaaggcc
acttactggtggatgaacaccttcatcacagcagcccaccgccgccccatcgacctcaag
gtcatcggcaagctgcccatcgccatgcgagccctcaccaactatctgaagctccgcaag
gctttcgagagtcagaggaggcctctgggctccatgccacaggaccctaagtggatctgg
agggccctatgccaggcgtttggacgtcccctcatcatcagcatcacctttcgcttcctg
gctgacctgctgggcttcgctgggcctctctgtatctctggcatcgtccaccacatcagc
aaggagaatcgcaccatacagcccccgataaagctgctgggggtctactttatctcctct
caagagttcttggcgaatgcatacgtgctggccgtgctgctgttctttgccctgatcctg
cagagaaccttcctccaggcctcgtattatgtggccatcgagacgggcatcaacttacga
ggggctatacagactaagatctacaacaagatcatgcggctgtgcacctccaatatgtcc
atgggagaactgacagtggggcagatctgcaacctggtagccatagataccaaccagctc
atgtggttcttcttcctctgtcccaacctgtgggccatgccagtccagatcattgtgggg
gttattatgctctactacctcctggggatcagtgctttgattggggccacagtcattgct
gttctggcccctgtccagtactttgtggccaccaagctgtcccaagcacagaagagcacc
ctggagtactccagtgagcggttaaagaagactaatgagctgctgcggggcatcaagctg
ctgaaactgtacgcctgggaacacatcttctgtcacagtgtggaggacaccagaggcaag
gagctcaccagcctgcaggccttcgccctgtacacatccatatctatattcatgaatgca
gccatccctatcgctgctgtcctgactacgtttgtggtccatgtgcacatctctgaggag
gctgacctgtcacctgctgtggccttcgcgtccttatccctgtttcacatcctggtcact
cctctcttcctgctctccagcgtggtgcgatccacagtcaaggccctggtcagtgcccag
aagctgagtgagttcttcagtagtgatgagattggagacgagcaggagcccaacgctacc
atgcccgctggccccagcaaccacaacagcaagtaccaggctgtgcccctgaaggtggtg
aacaggaagaggccccccagggaagactgctggaacaactacagccagaagggaggcgac
ccgcccccccaggagagggaccaagacctctgcttcaggataaccagcggatatttcacc
tggacagacggccctcccaccctgtctaacgtagacatcaaggttcccttcggtcagctg
actatgatcgtgggccaggtgggttgtgggaagtcgtccctgctgcttgcagctctggga
gagatgcagaaagtctctgggactgtcacctggaacagtttgcccaacctggactctgaa
ggcgatgagaggtatgtgtctgaaggagacgagagccccacatcagacaaggatgcagct
ggtgatggggatattcagaagagaggctctgtggcttatgcttcccagaagccctggctg
ctcaacgcgacgctggtggagaacatcacctttgagatgcccatgatcaaacccaggtac
aaggctgtcatcgaggcgtgttccctgcagccggatatcgacatcctgccacagggagac
cagacggagatcggagagaggggtatagttctatctggagggcagcgccagcgtataggt
gtggccagagccctgtaccaacaggccaacgtggtcttcctggatgacccgttctcagcg
ctggacattcacctgagtgaccacctgatgcaggagggcatcctcaaactgctgagagaa
gagaagaggactgtggtgctggtcactcacaagctacagtatctaccccacgctgactgg
atcgtagcgatgaagaacgggaccactcaaaccgaggggactctgaaagacatccagaac
tctgaaccggagctgtttgaacagtggaagaccctgatgcaccggcaggacggagagttt
gagaaggagacagtgcctgagagtatgacggtgttggagcgcaagaacctgcggagagcc
atgtactccaaagaggccgccaagactgaggaggaggacaaagaagagtctgtggacagt
gacgaggatgacaatctgtcccaggccatgcgtcaccgcaccaccatcccctggcactcc
tgtggggtctacctgtcctctgcagggctcctcctcctgctactgctcctcctatcacag
ctctttaaacactccctcatggttgccatcgactactggctggcccactggacgtcccgc
gtcatcaatgccaagatggaagccaccgggaggaactgcactgccgctcaggagtgtgtg
ttcagccactcatggtacctgtcggtgttcagtgtgttgtgctgtctgggcatcattctg
tgtctggtcacctctgtggccgttgagtggacaggcctgagagtggccaaagaactacac
cacaacctgctcagcaagatcatactggcccctatgaggctgtttgagaccactcccctg
ggcagcatcctcaacaggttctcctctgacaccaacaccatagaccagcacatccctgcc
accctggagtgtctgagtcgctccaccctgctgtgtgtgtcggccctgggggtcatctcc
tacgtgacccctgtgttcctcattgctctggtgcctctggccatcgcctgctacttcata
cagaagtacttccgggtcgcttctagggacctccagcagttggaggatagtacccagctc
cctctcctgtcccacttctcagagacagtggagggcctcaccaccatccgggccttcaag
tatgagcccaagttcagacagaggttactggagttcactgatgccaacaacatcgcctcc
ctctttctcacagcagccaatcgctggctagaggtccgcatggagtacataggtgcctgt
gtggttctgatagcagctgtggcctccatctctaactctctgtataaccacctctccact
ggcctggtaggactaggactcacctatgcactcatggtgtccaactacctgaactggatg
gttcgtaacctggcagacatggaggttcagctgggttcagtcaagagaatcaatggtctg
ctacagactgagcctgagaactatgaaggactgctcactgcatctcaggtgccagatggc
tggccacagcagggggagattcagattgagaacctgagtgtgcgttacgacaccaccctg
aagcctgtcctcaaacaagtcaacgcacacatcagccctgggcagaaggtggggatctgt
ggcaggacaggaagtgggaagtcttccttctccctggccttctttcgcatggtcgacatg
ttcgaggggcgtatcatcatagatgacattgacatcgccaagctgcctctgcagaccctg
aggtctcgattctccatcatcctccaggaccccatcttattcagcggaaccatccggttt
aacctggacccagagatgaaggctactgatgacatgctgtgggaggctctggacatcgct
cagctaaaacctgtagtcaagaccctaccaggaggactggacgccacagtgacagaggga
ggggagaacttcagccagggccagagacagctcttctgtctggccagagccttcgtcagg
aagtctagcatcctcatcatggacgaagccacagcctctatagacatggccacggaaagc
atcttacagaaggtggtgatgactgccttcgctgatagaacagtggttactatagcacat
cgtgtccacaccatcctgaaagcagacctggtgatcgtgatgaagcgagggctcattcta
gaatacgacagaccccaggcgctgctggagaaagaggacagtgtcttcgcctccttcgtc
aaggcggacaagtga
DBGET
integrated database retrieval system
