Oncorhynchus keta (chum salmon): 118396520
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Entry
118396520 CDS
T09424
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03320
PPAR signaling pathway
oke04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118396520
03320 PPAR signaling pathway
118396520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118396520
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118396520
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118396520
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
118396520
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118396520
NCBI-ProteinID:
XP_035646669
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Position
17:16247051..16308804
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AA seq
464 aa
AA seq
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MASHYRPPSPLEDSVLGSPVCGDFLGGMEELQDIPQSIDGDALSSLDVPEYQSQSSNGSE
GSTVLDALTPASSPSSGGYGAAAGLEEFSSTSLNLECRVCADRASGYHYGVHACEGCKGF
FRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQSEKLKLK
AEILTGDREVEDPQQADQKTLARHIYEAYLKNFNMNKAKARTILTGKTSTPPFVIHDMET
LQLAEQTLVAKMVGTAGGHLLEKEAEVRIFHCCQCTSVETVTELTEFAKSVPGFSSLDLN
DQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPKFQFAM
KFNGLELDDSDLALFVAAIICCGDRPGLVNVTHIECMQENIVQVLQLHLLANHPDDTFLF
PNLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccactaccggccgccgtcccccctggaggattcggtgctgggcagcccggtg
tgtggggacttccttgggggcatggaggagctgcaggacatcccccagtccatcgacggt
gacgccctcagctccttggacgtccctgagtaccagtcccagtcgagtaacggctccgaa
ggatccaccgtcctagatgctctgaccccagcatccagcccgtcatcaggggggtatgga
gcggctgcagggctggaggagttctcctccacctctctcaacctggagtgtcgggtgtgt
gccgaccgcgcctccggataccactacggagttcacgcctgtgagggctgcaagggtttc
tttcggcggaccatccgcctgaagctggaatatgacaagtgtgagcgtcgctgtaagata
cagaagaagaaccggaacaagtgccaatactgccgctttcagaagtgcctgtctgtgggc
atgtctcacaatgcgatccgttttggtcggatgccccagtctgagaagctgaagctgaag
gcagagatcctgacgggtgacagggaggtggaggacccccagcaggccgaccagaagact
ttggccaggcacatttatgaggcctacctcaagaacttcaacatgaacaaggccaaagcc
cgcaccatcctcactggcaagacgagcactccacccttcgtcatccatgacatggagacc
ctccagctggcagagcagaccctggtggctaagatggtgggcacggccggaggccatctc
cttgagaaggaggctgaggtccgcatcttccactgctgccagtgcacctccgtagagacg
gtcacagagctaaccgagttcgccaagtctgtccccggcttctccagcctggacctgaac
gaccaggtgactctgctgaagtacggcgtgtacgaggcactgttcgccctgctggcatcg
tgtatgaacaaggatggcctcctggtggcctacggatcgggcttcatcaccagggagttc
ctcaagagtctgaggaggcccttcagcgacatgatggagccaaagtttcagtttgccatg
aagttcaacgggctggagctggatgacagtgacctggctctgtttgtggctgccatcatc
tgctgtggagaccgccctggcctggtgaacgtgacccacatcgagtgcatgcaggagaac
attgttcaggtgctgcagctccacctgctggccaaccacccagacgacaccttcctcttc
cccaatctgctgcagaaacttgccgacctccgtcaactggtcaccgagcatgcgcagttg
gtccaggagatcaagaagacagaggacacgtcactccaccccctgctgcaggagatctat
agggacatgtactga
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