Oncorhynchus keta (chum salmon): 118396529
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Entry
118396529 CDS
T09424
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118396529
Enzymes [BR:
oke01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
118396529
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118396529
Prokaryotic type
118396529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
118396529
NCBI-ProteinID:
XP_035646677
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All DBs
Position
17:16896351..16907984
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AA seq
721 aa
AA seq
DB search
MGGFQGVTISGVKYTWVGNLAYFIVRSLLNPCTSRSIRNSLWVALRYHTPHLRTPDIRAP
GVCQIHSFFFEVPISNLLIPMADAEPMLVPAPGGEKRACPALEEEVDHSTKRPRVQKEEK
NGGPSHKLPQDEGEEPEGEETEPLDEDGEGEGLGSGEAFAEMMKHGLTELDVGILKFVSE
HQGFSGILKERYSDFVVHEINKEGKTVRLDDLSVPEEAEEAPVEQPESQVFTEEQKQQLE
QLQLFKNKEGDVSIEVADDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQK
ALAAPRKHSWPKSRGAFCHFVLYKENRDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITV
QEIAVLKITAERLSHLNKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTEEQVQ
QAMSSLRETGFINYYGMQRFGTTAVPTHQVGKAILQDNWKEVIDLILKPRPGAEKGYLVK
CREEWAQSQDPEAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQ
SFMWNTMVSRRIEAFGLKAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPT
HHVGKGYREMLSADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYEDPRVSLVH
TDVEKLEDQPPPVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWL
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggtttcaaggagtgactatttccggagtcaaatacacgtgggtaggaaacctg
gcgtactttattgtgcgctctctactaaacccctgtacgagcaggtccatcaggaattct
ctttgggttgctttgaggtaccatacaccccatctacgaactcctgacatccgagcacca
ggtgtctgccagatacacagctttttctttgaggtccctatcagcaatctcttgatccct
atggccgatgcagagcccatgctggtccctgcccctgggggggagaagagagcatgccct
gctttggaggaggaggttgaccacagcaccaagagacccagagtccagaaggaggagaag
aacggagggccctctcacaagctgccccaggatgagggagaagagccagagggggaagag
acggagccattggatgaggatggagaaggggaagggttggggtcaggagaggcctttgca
gagatgatgaagcatggcctcacagagctggatgtggggattctgaagtttgtcagtgaa
caccaggggttctcaggcattctcaaggagaggtactctgactttgtggtgcacgagatc
aacaaagaaggcaagactgtgcggttggatgatctctccgttcctgaggaggctgaggag
gccccagtagagcagccagagtcccaggttttcacagaggagcagaaacagcagctggag
cagctacaactcttcaagaacaaagagggtgatgtttctatagaggtagctgatgacaca
aaagagaagcggaccctggtccacaaggctgtgaagaccctgtaccctggactggagacc
aagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagctggacagaaa
gccctcgcagcccctaggaaacactcctggcctaagagccgcggggccttctgccacttc
gtcctctacaaggagaacagagacaccatggaggccatcaacgtgctctccaagttcctc
aggatgaggcccaatgtcttctcctacatggggaccaaggacaagagagccatcactgtg
caggagattgcagttctcaagatcacagcagaaagactgtctcacctcaacaagtgcctc
aataactttaaactgggaaacttctgctacaagaaacaccctctgaagctcggagaacta
cagggcaatcacttcactgtggtcatcaggaacatcacagggacagaggagcaggtccag
caggccatgtcctcccttagagagactggcttcatcaactactacggcatgcagcgtttt
ggcaccaccgccgtgcccacacaccaagttggcaaggccatcttgcaagacaactggaag
gaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttatctggtgaag
tgccgtgaggagtgggcccagtcccaggacccagaagcagcgctaaagaagctgcctgtt
aaacgctgtgtggagggacagctgctccgaggtctctccatgtacggcaagaagaacatc
atcactgccttcgccatgatccctcgtaacaaccggctgatgtacatccacagctaccag
agctttatgtggaacaccatggtcagcagacgcattgaggccttcggactgaaggctgtg
gagggagacctcgtgctcaggggaggcactgcattcgtgctgtccgcagcagaggccgag
acccactctatccaagacgtggtgatgcccctaccagggtttgacgtcatctaccccact
caccacgtgggtaagggctacagggagatgctgagtgcagataacctggacattgacaac
atgagacacagggtgagggactactctctggccggggcctaccgacgcatcctcatcaaa
cccagtgacgtcagctgggaggtgattaactatgaggaccctcgtgtctccctggtccac
actgatgtggagaaactagaggaccaacctcccccagttttcaacaaagaggggaagtac
agggctctgaggatggagttctccctgcctccctctacctatgccaccatggccatcaga
gaggtgctcaagatggacaccagcatcaagaaccagactcagctcaacaccacctggctc
aactaa
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