Oncorhynchus keta (chum salmon): 118396534
Help
Entry
118396534 CDS
T09424
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118396534 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118396534 (tubgcp6)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
118396534 (tubgcp6)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
118396534 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
118396534
NCBI-ProteinID:
XP_035646685
LinkDB
All DBs
Position
17:17431222..17462780
Genome browser
AA seq
1921 aa
AA seq
DB search
MYSSPDVCLKSGSHNSSSNSNSITELLGSLCDSSLTGVSWKRRALGGVSREGVRRTLRKR
AYGALLSKLFQEGSPKGFLSVPSATSTTPPRNKLLMISFDLRVAGCQDEAERLEEQLGRL
SEGPASGLKELDSVLELLVQLTGSAPPPPASFSRDYMRRERPVLRRPPLGGYQSEELQRL
EARAWALMCGEEWGSLKGLCGTLGLMDAPPGTGLLALRRRSDVEERFEKETRMSLFGALQ
HSRTSDLDIRLNLPPVPSNADVTGLAIRVPPCLDQLEDEGFQSASNLTPDSQSEPSPSPE
LDVWDALRTFEPGRRRCWESVGCPPGKREFPYLTEGGREAFDQLYRLWEGEMRVVCSASP
SPLLPLPLDCQTQLVSDLLNVLIGVASTTFPLNQVCVNFDVRPGVCVSGASPESVSRLLG
ELAQYGTHYLRLSRFVLQSAQKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFL
FRKVGRQLRYLSELCCVDGASGVGQATFPVGVTLLSYLYNEAQSNCSNENYPVLLSLLKS
SCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWAQGYTLISRDVEDCVPVF
LRHIANDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRM
ERIAKHSATSREEQALRTAQARQELINQVRQSAAKTLESIRGRQVSQRLAEEAKKRERFE
ELRQHLEQEQEWHSLARRKEQEDEFSFARELRDREKRLQALEEQLEIRARKELIAQYSHL
SEEAAKREWRAMWRVQRMRLDDSRAQFLQQDQQETEAILEKYPVGGQRPPLEILQPAPAQ
TTQPLTQESLSPEPCEQQSEEPTQALLHHQSTPPALPTTKLDLTLVTEHIDANDLPKPAD
SLQVDQALQEIGSDLPEALAPHKPVDYDFSAPYSPLEGVTALARPSWGPVVQPDVAHPRI
PTGPPESTLGMGCVVSGTLALPSPLPGSTYGHSSDSTMGVGCVVSGAGVLLRPSPHGQAS
QSSIPLGQYFTDVPLALHTANVHGHPSQTTVQLVDGSESKQMDSRQENTEDPSPPGGIVK
EAEGTVEASCLVEMKPAEMEKLDCVGAEEQMAGSLREASASSTPEQGHDSGYHPGQASPS
LSGPSSVYELPTANIQGHASDAHIEVGEHVSDVEALLPSQNIHGHSSDANIKVGEFVWEV
AAPLPTANVHGHASDAHIKVGDHVSEVVASLFTQNIHGHASDSHIKVGEHMSEEVASIHT
QNIHGHSSNTHFKAGEFVLDAEPSRPRWSKHGHASDCTLQVGCVLSGTEPVLSPLPGSTY
GHSSESTLGIGCVVSGVEPLHAPLPGSDFGHASDSTLGGGCVVSGTVTLPSPIPGSDYGH
SSDSAMGGGCVISGIEPVRPPLPGSNFGQSSDSTLGTGCVVSGVSPLPSPIPGSIYGHSS
DSALGGGCKVSGVNPLPSPIPGSIYGHSSDSALGGGCKVKETGNEYDARTLEQQEQQRLA
EGISSWAAGLALSPGESSEREYLRSLAAQYQVEQYEDCYGLMTLAPECHPLHQVTRGPWG
LPVDPSLRRATDTTVVQLSGMVSLPVLMKHSVTTPLITHVSLVNKAVVDYYFVELGVERH
FEALRHFLLMEDGEFAQSLSDLIFEKMGSGQTPGELLTPLVLNSILSKALQYSLHGDSSL
APNFTFALRFLPETFHPHAPDALNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKH
MVWSLRDVWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWLEF
STKLASASDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPW
DSQQGEAVHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKD
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagtccagatgtctgccttaaatctggcagtcacaacagtagcagtaacagc
aacagcatcactgaactcctgggctccctgtgtgacagcagcctcactggggtgtcatgg
aaacgtcgtgctctcggaggggtgtctcgagagggggtccgccgcactctcagaaagcgt
gcctatggggccctgctgtccaaactgttccaggagggctccccgaaagggttcttgtca
gtacctagtgccacgtccaccaccccgcccagaaacaagctacttatgatatcctttgac
ctgcgagtggcggggtgccaggacgaggccgagaggctggaggagcagctggggaggcta
agtgaggggcccgcctcgggtctgaaggagctggactctgtgctggagctcttggtgcag
ctgactggctctgcaccaccacccccggcctcattcagcagggactacatgcgcagggag
aggcccgtgttgaggaggcctccactggggggctaccagagcgaggagctgcagagattg
gaggcccgagcctgggccctgatgtgtggggaggagtggggatccctgaagggtctgtgt
gggactctgggtctgatggatgctcctccgggcacaggcctgctggcactgaggaggagg
tccgacgtagaggagaggtttgagaaggagaccaggatgtctctgtttggagccctgcaa
cactcccgtacctcagacctggacatcaggctcaatctgcctcctgttcccagcaatgct
gatgtcactgggctagccatacgggtgccaccttgtttggaccagttagaagatgagggc
ttccagtcagcctccaacctaaccccagactcccagtcagagcccagtcccagcccagaa
cttgatgtctgggacgccctgaggacttttgagcctgggagacgccgctgctgggagtct
gttggctgcccaccagggaagagggaattcccctacctgacggagggaggcagggaggct
tttgatcagctctacaggctgtgggagggggagatgagggtggtatgctctgcctccccc
tcgcccctcctgcccctgcctctggactgtcagacccagctggtcagtgacctacttaat
gtattgatcggggtggcgtctactaccttccccctcaaccaggtgtgtgtaaattttgac
gttcgacccggagtgtgtgtgtcgggagcgtcaccagagagtgtgtctcgtttgcttggc
gagctggctcagtatggcacccattacctgaggctcagtcgcttcgttctgcagagtgcc
caaaagagaggcctggtcttccaggcgtttacaggtgggctgcgtaagtacctgcattac
taccgggcctgtgtcctcagcacccctcccacccttagcctgctcaccatcggcttcctg
ttccgcaaggtgggccggcagctcaggtatttgtcagagttgtgctgtgtggatggggca
tctggtgtgggccaggctaccttccctgtgggtgtgacgctgctctcctacctgtacaac
gaggcccagagcaactgcagcaatgagaactaccccgtgctgctgtccctactgaagagc
agctgtgagccttacacacggtttgtgtcagactgggtgtacagtggagtgttccgggac
gtgtacggagagttcatgatccaggtcaacgaagactacctcagcttcagagacaagcac
ttctgggcgcagggctacacactgatctcccgtgatgtggaggactgcgtgcctgtcttc
ctccgacacatagccaacgatgtgtacgtctgcgggaagaccatcaacctgctcaagatc
tgttgtccccagcattacatctgctggtcggagctgcccgtgcctcgcatcgctgtcacg
ttctccctgcaagaggtagaggagatagagagggactgtgccgtgtaccgaggacgcatg
gagaggatcgccaagcacagcgccaccagcagggaggaacaggccctgcgcacagcgcag
gcacgccaggaactgatcaatcaggtcaggcagtcggccgccaagaccctggagagcatc
cgcgggcgccaggtgtcgcagcgtctggctgaagaggcaaagaagagggaacgctttgaa
gagctgagacagcacttggagcaggaacaagagtggcacagtttagccaggaggaaggag
caggaggatgaattcagctttgccagggagctgagagaccgagagaagcgactacaggcc
ctggaggagcagctggagatccgagccaggaaggaactgattgcccagtacagccaccta
tcagaggaggcggccaagagggagtggcgggccatgtggagggttcagcgaatgagactg
gacgattcccgggcccagttcctacagcaagaccaacaggagactgaggctattctggag
aagtatcctgtcggagggcagagaccccctctggaaatactacagccagctccagctcag
accactcaaccattaacacaggagtccctatccccggagccctgtgagcagcagtctgag
gagccaacccaggccctccttcaccaccaatccactcccccagcactccccaccacgaaa
ctcgacctcaccctcgtcacagagcacatcgacgccaatgacttgcccaagccggccgac
agcctgcaagtggaccaggccctacaggaaattgggtcggacctcccggaggctcttgca
cctcataaacccgtagactatgactttagcgccccctacagtccccttgagggagtgacg
gccctggctagacctagctggggtcctgtggtacagccagacgtggctcaccctcgcatc
ccaaccggtccccctgagtccactctaggcatggggtgtgtggtgtccgggactttagct
ctcccgtctccgctacccggaagtacctacggccattcttcagactccactatgggtgta
gggtgtgtggtgtcaggagctggggtcctcctcaggcccagtcctcacggccaggcctcc
caatctagcatccccctgggccagtacttcactgatgtgcccctggctctccacacagcc
aatgtccacggacacccctcccagacaacagtgcagctggtggatggaagtgagtcaaag
cagatggacagcaggcaggagaataccgaagacccatcacctccagggggcatcgtaaaa
gaggctgaagggactgtagaggcatcatgcctggtggagatgaagccagctgagatggag
aaactagattgtgttggagcagaggaacagatggctggttctctcagggaggcttctgcc
tcctccaccccagagcagggccatgacagtgggtatcacccaggacaggcctccccttcc
ctctctggaccctccagtgtgtacgagcttcctactgccaacattcaaggccatgcctca
gatgctcatattgaagtcggagagcacgtttcagatgtggaagcccttctcccttctcaa
aacattcatggtcactcatctgatgctaatataaaggtaggagagtttgtttgggaggtg
gctgctcctcttccgaccgccaacgttcacggtcacgcatctgacgctcatattaaagtt
ggagaccatgtttcagaagtggtcgcctcccttttcacccagaacattcacggtcatgcc
tcggactctcacatcaaggtcggggagcacatgtcagaagaggtcgcctccattcacacc
caaaacatccacggtcactcatccaacactcacttcaaggcgggtgagtttgtgttggac
gcagagccctcccgaccacgctggagcaagcatggtcacgcctcagactgcacacttcaa
gtaggctgtgtgctgtccggcacagaaccagtactctcccctttacctggtagcacctac
ggccattcctctgagtccacactaggtatagggtgtgttgtctctggggttgaacccctt
catgctcctctacctggaagtgactttggacacgcctcagactcaaccctgggtggaggg
tgtgtggtgtcaggaacggtaacccttccttctccgatacccggaagtgactacggccat
tcgtcagattcagcgatgggcggagggtgcgtgatatctgggattgaacccgttcgccct
cctcttcccggcagcaacttcggacagtcctcagactccacactgggcacagggtgtgtg
gtgtcgggtgtaagccctctgccctcacccatccctggcagtatctacggccacagctca
gactctgccctgggagggggctgtaaggtgtcaggtgtaaaccctctgccctcacccatc
cctggcagtatctatggccacagctcagactctgccctgggagggggctgtaaggtgaag
gagactggtaatgaatacgacgccaggaccctggagcagcaggagcagcagcggctggcc
gagggcatctcgtcctgggcagcgggcttggctctgtccccaggcgagagctcagagagg
gagtacctccgctccctggctgctcagtaccaggtagagcagtacgaggactgctacggt
ctcatgacgttggccccagagtgtcaccccctgcatcaggtgacgcggggcccctggggc
ctcccggtggacccatcgctccgcagggccacagacaccacggtggtgcagcttagtggg
atggtctccctgcccgtcctcatgaagcactctgttaccaccccactcatcacacatgtg
tccttggtgaacaaggcggtggtggactactacttcgtagagcttggagtggagaggcat
tttgaggccctcaggcacttcttgctcatggaggacggggagttcgcccagtctctcagt
gacctgatctttgaaaagatgggcagtggtcagactcctggagagctgttgactcctctg
gtcctgaactccatcctgagtaaggctcttcagtacagtcttcatggagacagttctctg
gcccctaacttcaccttcgccctgcgcttcctcccggagaccttccatcctcacgccccc
gacgcactcaactgcctggagctacggtacaaggtggactggccgttgaacatcataatc
acagacagctgtatgaacaagtacaaccgtctgttctccttcctgctgcagctcaaacac
atggtgtggagcctcagagacgtctggtttcacctcaagaggactgcactggtgaaaggg
gcgggccgctcggtgcagttccgccagctgcagctgtacagacacgagatgcaacacttt
gtgaaggtgatccagggttacatcgctaaccagatcctgcaggtgtcctggttagagttc
agcaccaagctggccagtgcctcggacctggacgccatacaccgcacacatgccgactac
ctcaacagagctatcttcaggggtctgctgacagagaaggcagctccagtcatgaacatc
atccacagtatcttcagcctgatcctgaaattccgggcccagctgatcgcacagccctgg
gacagccagcagggggaggcagtgcaccccagcttcatcgccatgcagcagtcatacaac
acttttaaatactactcccacttcctcttcaaagtggtgaccaagctggtgaaccgagga
tatcagcctcacctggaggacttcctgctccgcatcaacttcaacaactactacaaagac
tcctga
DBGET
integrated database retrieval system
