Oncorhynchus keta (chum salmon): 118396598
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Entry
118396598 CDS
T09424
Symbol
map1lc3b
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B isoform X1
KO
K10435
microtubule-associated protein 1 light chain
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
oke04216
Ferroptosis
oke04371
Apelin signaling pathway
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118396598 (map1lc3b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118396598 (map1lc3b)
04137 Mitophagy - animal
118396598 (map1lc3b)
09143 Cell growth and death
04216 Ferroptosis
118396598 (map1lc3b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118396598 (map1lc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118396598 (map1lc3b)
03029 Mitochondrial biogenesis [BR:
oke03029
]
118396598 (map1lc3b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118396598 (map1lc3b)
Membrane trafficking [BR:
oke04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
118396598 (map1lc3b)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
118396598 (map1lc3b)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
118396598 (map1lc3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Peptidase_M26_C
Motif
Other DBs
NCBI-GeneID:
118396598
NCBI-ProteinID:
XP_035646784
LinkDB
All DBs
Position
17:19356812..19381854
Genome browser
AA seq
125 aa
AA seq
DB search
MPSEKTFKQRRTFEQRVDDVRLIREQHPNKIPVIIERYKGEKQLPILDKTKFLVPDHVNM
SELIKIIRRRLQLNSNQAFFLLVNGHSMVSVSAAIAEVYDREKDDDGFLYMVYASQETFG
TITPQ
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagagaagacgttcaaacaaaggaggacatttgagcagagagtagatgatgtg
agactgattcgagagcagcaccccaacaagatcccagtcatcatcgagagatacaaggga
gagaaacagctgcccatcctggataaaaccaagttcctggttcctgaccatgtcaatatg
agtgagctgatcaaaatcatcaggaggcgcctccagctgaactccaaccaggccttcttc
ctgctggtgaatggccacagcatggtctccgtgtcggcagccatcgctgaggtgtacgat
cgcgagaaggacgatgatggcttcctctacatggtgtacgcctcgcaggagacctttgga
accataaccccccagtaa
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