Oncorhynchus keta (chum salmon): 118396623
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Entry
118396623 CDS
T09424
Name
(RefSeq) zinc finger CCCH domain-containing protein 18-like
KO
K13092
nuclear protein NHN1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118396623
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
General mRNP proteins
118396623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
118396623
NCBI-ProteinID:
XP_035646818
EnsemblRapid:
ENSOKEG00005039054
LinkDB
All DBs
Position
17:20982404..21017288
Genome browser
AA seq
1144 aa
AA seq
DB search
MDTPESPTQSPESPNQSPQSPEEERAISDSEFLASPEEEEEDRLLSDSELLNDEDNGGLD
EEGGEGGDSELDDDEDGGVVQERISDPEDDEADGEGGRDRHTILEQEQEESVGMVMMGQE
RQESQSDEEEDRISQTPKSPDSEPEQERSSPLAEEMSSHEKEDESGEPSVKLAVETAEVD
DEEEEERLRRRRVVVNQMKEELSSVSRELDEHELDYDEEVPEEPNVLAPEEDDEVEKGPR
EGDEKEDKSVKKKEKIPILPPSPKDGPPKKPEESRAQDRGRRDSFRDKKDEDDGEIDEGE
IDDDDLEEGEVKDPMDRKVRPRPVCRFFMKGNCTWSMNCRFIHPGVNDKGNYSLISKPDP
FSPNGAPPGAPHPLIPGSNPWGGPAVEELPPPPPPVEPPVESAWERGLRHAKEVLKKATI
RKEQEPDFEEKRFNVTIGEDERDFDKENDFFRERSYRITREIRDPGDLEFRDPVYPNDPY
ADPYYDYEMEAFWRGGQYENFRVQYTETPLPYHYSERERERDPRERHRDRERDHRERERR
QREREREREREREKERMRRKEEWERDRMKRDEKERPVRERPPREPREKKEGEDKQPKGPP
RSPIDTNMPPNRPMMEPPLKTELMPMSKRPDEWKDPWRRSKSPRTRPGMSGSPPRGRRRH
RPSGSSVSLSNSSRSSSRSSSYTGSGSSRSRSRTSSFSSYSSHSSQHSSFSGSRSRSRSF
SSSPSPTPSAQRNAKNKAAAPLALGPKGIPSKPGAPSPPGREKAPPKKAPSPPLPGQPGK
PPKPTLEGAKPGNSREPREVGRPMPPQEGGKPLNLREGRRKERQQHNPPRRQTVSGSVSG
SSYSGSSSRSRSHSSSATISPSGSKKSRSLSVSSVSSVSSASSSSSVRSADSDDMYADLA
SPVSSASSRSPTPGHTHARKERGPPRDRGPNKDKGKPTKKDEPHPPREDRRKMDPSGLPP
RNTHGPMPRSGPGSRGHGPGGHPMHPPHGPPMGPPGGYGQHKDIKLTLLNKQQAERGNRK
RYMPSDKDRPTSPLSKRIAMSPERGRGDRRMPGRPPLSPRMDRPRGQGPRPMPPPGERKR
PLSPPPKSSGKGPGGLSSGSGKQPPGGPGSGKPSSTLSRREELLKQLKAVEDAIARKRAK
IPGK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggacacccctgagagtcccacccagtctcctgaaagccccaaccaatcaccccaatcc
ccagaggaagagagggcaatttctgacagtgagttcctggcatcccccgaggaggaggag
gaggacaggctgctctctgacagtgagctgctgaatgatgaagacaacggtggtttagat
gaagagggtggtgaaggtggggactctgagctggatgatgacgaagatgggggggtagtt
caggagcgtatctctgacccagaggatgatgaagctgatggggaaggtggaagggatagg
catactattctagaacaggagcaggaggagtcagtggggatggtgatgatgggacaggag
cgacaggaaagccaatcagatgaggaggaggaccggatcagccaaactcctaagtcccct
gattctgagccagagcaggagaggtcatcccctttagctgaggagatgtccagccatgag
aaggaagatgagagtggggaaccgtctgtgaagctggcagtggagacggcagaagtagat
gatgaagaagaggaagagagactgaggaggaggagggtggtggtgaatcagatgaaggag
gagttgtcgtctgtgtccagagagcttgacgagcatgagctggactatgacgaggaggtt
cctgaggagcccaatgttctagcgcctgaagaagatgacgaggtagagaaaggacccaga
gaaggggatgagaaagaggacaagagcgtcaaaaagaaagagaagataccaatccttcct
ccatccccaaaagacggtccacctaagaagcctgaagagtccagggctcaggacagagga
aggagagattcctttcgtgacaaaaaggacgaggatgatggagagattgatgagggagaa
atagatgatgatgacctggaggagggagaggtgaaggaccccatggacaggaaggtcaga
cccaggcccgtctgcaggttcttcatgaaaggtaactgcacatggagtatgaattgtagg
ttcatccatccaggggtcaacgacaagggcaactactctctcatctccaagccagacccc
ttctctcccaacggggcaccacctggagcaccccaccctctcattcctggaagcaaccca
tggggtggacctgctgttgaggagctgcctccaccccctcctccagtggagcctcctgtg
gagagtgcctgggagaggggtctgagacatgccaaagaggtgttgaaaaaagctaccata
cgcaaagagcaggagccagactttgaggagaagcgctttaacgtgaccattggagaggat
gagcgagactttgacaaggagaatgatttctttcgggaacgcagctaccgcatcaccaga
gaaatcagagacccgggtgacttggagttcagagacccagtctatcctaatgacccttat
gctgatccatactatgactatgagatggaggccttctggagagggggacagtatgagaac
ttcagagtgcagtacacagagacacctctgccctaccactacagtgagcgtgaacgtgag
cgggacccgcgagagcgccatcgtgaccgtgagcgggaccaccgcgagcgagaacgccgg
cagagagaacgtgaaagggaaagagagagggagcgagagaaggagagaatgcgcagaaag
gaggagtgggagagggatcgcatgaagcgtgatgagaaggagaggcccgtcagggagcgg
cctccacgcgaacctcgggagaagaaggagggggaggacaagcagcctaaaggtcccccc
aggtcccccatcgataccaacatgccccccaatcggccaatgatggagccgcctctcaaa
acggagctgatgcccatgtccaagcggccagatgagtggaaggacccctggcgccggtct
aaatcccccaggacacgtccgggcatgtccgggtcaccaccgcggggccgccggcgtcac
cggccctctggatcctctgtctcactgtccaactcctctaggtcttcgtcccgctcttcc
tcctacacaggctccggatcatcccggtctcgctctcgcacctcatccttcagctcgtac
tccagccactcctcccagcacagctccttcagcggcagccgctccaggtccagatcgttc
tcctcgtctccctctccgaccccttcagcacagagaaacgccaagaataaagcagcggcc
ccactggccctagggcccaaaggcatcccgtcgaaacctggtgcgccttcccctcctggt
agggagaaggctccccccaagaaggctccaagcccaccactgccaggccagcctgggaaa
ccccccaaacccaccctagagggggctaagcctggcaactcccgcgagccccgtgaggtg
ggccgacccatgccgcctcaggaggggggcaaacccctcaacctgcgggagggccgacgg
aaggagcggcagcagcacaatccacccaggaggcagacggtcagtggcagtgtgagtggc
agtagttactctggctccagctctcgctcaagatcccactcctcctctgcaaccatctca
ccttccgggtccaagaagtccaggtctctgagtgtgagcagtgtgtctagcgtgtcctcg
gcctccagcagcagctctgtgaggagcgctgactcagatgacatgtacgccgacctggcc
agccctgtgtcgtcagccagctcccgctccccaaccccaggacacacccatgcacgcaag
gagaggggccccccacgggacaggggccccaacaaggacaaagggaagcccactaagaaa
gatgagccccatccccccagggaggaccggaggaagatggatccctcaggcctccctccc
agaaacactcacggtcccatgcccaggtctgggcctggcagcaggggccatggtcctgga
ggccaccccatgcacccgccgcacggacctcccatgggtccccctggaggttacggccag
cacaaagacatcaaactcacgctcctcaacaagcagcaggcagagcggggtaacaggaag
cgatacatgccttcagacaaggacaggccgacctctcccctcagcaagaggatagcaatg
tctcctgagagaggtcgtggtgacaggaggatgcctggacggcccccactctctcctaga
atggaccggcctagaggccagggccctcgtcccatgcccccaccgggagaaagaaaacgt
cctctgtccccaccacccaagtcgtctgggaaaggtccaggggggttgtcatcgggctca
ggcaagcagcccccaggcggcccgggctcaggcaagcctagcagcacactgtcccgccgt
gaggagctgctgaaacagctcaaagctgtggaggacgccattgcccgcaagagggccaag
atccctgggaaataa
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