Oncorhynchus keta (chum salmon): 118396635
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Entry
118396635 CDS
T09424
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118396635 (zgc:173742)
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118396635 (zgc:173742)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Topoisomerases
118396635 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
118396635
NCBI-ProteinID:
XP_035646833
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All DBs
Position
17:complement(21334714..21372877)
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AA seq
750 aa
AA seq
DB search
MGGEKNVGQAKGGKAKAKTPRQRLSDKEGGSGGDAPRKSTKPNKERTKATAKSQRVEKVK
VQKKVKAFKTESVESFDDDVRFNLAVKEEPEDGDFVPEKRGKKRKRPEDEPMEGPSCSSA
TPMKLKEKDGADPRTEKNTKEGIKKEKRPKKEEAEHPVTTKKKSKEEIEAAKALKIKKRE
EEEQQRWRWWEEDKYEDGVKWKFLEHRGPFFPPEYQHLPDNVNFYYNGKVVKLGLAAEEV
ALFFAQMLDHEYTTKDVFRNNFFKDWRKEMTLEERVLISDLNKCDFRELHAMHKEKVEAR
KAMSKEEKLVMKEANQKIVEEYGFCILDHHRERIGNFKIEPPGLFRGRGEHPKQGMLKKR
IQPEDVIINCEKESCIPEPPAGHHWKEVRHDNTVTWLASWTENVQGSCKYVMLNPSSKLK
GEKDWEKYEVARRLKSCVNGIRQQYQQDIKSKQMETRQRAVALYLIDKLALRAGNEKEEG
ETADTVGCCSLRVEHITLHDLLEDKECVVEFDFLGKDCIRYYNKVPVTKRVFKNLTLFMK
NKEPGDDLFDRLNTTLLNKHLSSLLPGLTAKVFRTFNASITLQEQLQQLSNMTDNPAEKL
LSYNRANRAVAVLCNHQRVPPKTFDQSMANLQSKIDGRREQLALAKSELKLAKKEVKAHS
SDGKLQAVVERKKKAVQRCEEQLMKMEVQATNREENKQIALGTSKLNYLDPRISVAWCKN
MEVPLDKIYNKSQRDKFAWAVDMTGADFIF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagagaagaatgttggccaagccaaaggagggaaggccaaagcgaagacaccc
agacagaggctgagtgataaggaaggaggctcgggtggagacgcacctaggaaaagtaca
aagcccaataaggaaagaactaaagccacagcaaagtctcagcgggtggaaaaagtaaaa
gttcagaaaaaggtcaaggctttcaaaacggagagcgtggagagctttgatgatgatgtg
aggtttaatttggctgtaaaagaggagcctgaagatggagactttgtgccagaaaagagg
gggaaaaagaggaaaagaccagaggatgaacccatggaaggtccctcgtgttccagtgca
accccaatgaaattgaaagagaaggacggggctgacccgaggacagagaagaacacaaag
gaggggataaagaaagagaagaggccaaagaaagaggaggcggagcatccagtcactaca
aagaagaagtcaaaggaagagattgaggcagcaaaagcgttgaagatcaaaaaaagagaa
gaagaagagcagcagcgctggagatggtgggaagaggacaagtatgaggatggtgtaaaa
tggaagtttctggagcacaggggtccctttttcccaccggagtaccagcatctcccagac
aacgttaacttctactacaatggtaaagttgtgaagctgggccttgctgcagaggaggtg
gccctgttctttgctcagatgcttgaccatgaatacaccacaaaagatgtgttccgaaac
aacttcttcaaggactggaggaaggagatgaccctggaggagagggtgctaattagtgac
ctgaataagtgtgactttcgggagcttcacgccatgcacaaggagaaggtggaggctagg
aaggccatgagcaaagaggagaaactggtgatgaaagaggccaatcagaagatagtggag
gagtatggcttctgtatactggaccaccaccgggaacgcattggcaactttaaaattgag
ccgccaggtctcttccgaggacggggggagcaccccaaacaaggcatgcttaagaagagg
atccagccggaggacgtcatcatcaactgtgaaaaagagtcttgtatcccagagccccct
gctggtcaccactggaaggaggttcgccatgacaacacagtgacctggctggccagctgg
actgagaatgttcagggctcctgcaagtatgtcatgctcaaccccagctccaaactcaag
ggtgagaaggactgggagaagtatgaggtggcccgccggttgaaaagctgtgtgaatggg
atccgccagcagtaccagcaggacatcaagtccaaacagatggagacccgccagagagct
gtggccctttacttaatagataagctggccctgagagcgggtaacgagaaggaggagggc
gagacggcggacacggtgggctgctgctccctgagggtggagcacatcaccctccacgac
cttctggaggacaaggagtgtgtggtggaatttgacttcctgggtaaagactgtatccgc
tactacaacaaggtccccgtcaccaagagggtgttcaagaacctcacgctcttcatgaag
aacaaggagcctggagacgacctgtttgatcgcctcaacacgaccttgttgaataagcac
ctgtcatccctgctgcctggtctgactgctaaggtattcaggactttcaacgcctccatc
accctgcaggagcagctccaacagctgtccaacatgaccgacaacccggcagagaagctg
ctctcctacaacagggccaaccgagctgttgcagttctgtgtaaccaccagcgggtgccg
ccaaagacctttgatcagtctatggccaacctccagtccaagattgatggcaggagggag
cagttggccctggccaagagtgagctgaagctggccaagaaggaggtcaaagctcatagt
tcagacggcaagctgcaggcggtggtggagcgtaagaagaaggctgtgcagcgctgtgag
gagcagcttatgaagatggaggttcaggccacaaaccgagaggagaacaagcagatcgca
ctgggcacctccaaactcaactacctggacccacgcattagcgtggcctggtgtaagaac
atggaggtgcccctggacaaaatttataataaatctcagagggataagtttgcctgggct
gttgacatgaccggggcagattttatattctaa
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