Oncorhynchus keta (chum salmon): 118396646
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Entry
118396646 CDS
T09424
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04115
p53 signaling pathway
oke04120
Ubiquitin mediated proteolysis
oke04137
Mitophagy - animal
oke04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118396646 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118396646 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118396646 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
118396646 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118396646 (siah1)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118396646 (siah1)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118396646 (siah1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
118396646
NCBI-ProteinID:
XP_035646847
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All DBs
Position
17:23027162..23051912
Genome browser
AA seq
335 aa
AA seq
DB search
MSGRANLQPMNSWKGVLKLFTCIASRTTANKPKELPIFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatcttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaactgccaacaaacctaaagagttacccatttttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgcgccccctcccagcgcgtccccaccttgtccggc
actacggcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactat
gtgttgccccccatcctgcagtgccagagcggccacctggtgtgcagcaactgccggccc
aagctcacctgctgccccacctgccggggcccgctgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctcttcccctgcaagtatgcgtcgtcgggctgtgaggtg
acgctgccccacacagacaaggcagagcacgaggagctgtgtgagttccggccatactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttccttgcc
acagacattaacctgcctggggcagtggactgggtcatgatgcagtcctgcttcggtttc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgcc
attgtgcagctgatcggcacgcggaagcaggcagaaaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccatgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttc
gctgagaacggaaacctgggcatcaacgtcaccatatccatgtgctga
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