Oncorhynchus keta (chum salmon): 118396648 Help Entry 118396648         CDS       T09424                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke03040   Spliceosome Brite KEGG Orthology (KO) [BR:oke00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118396648 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oke03021]     118396648 (sf3b3)    03041 Spliceosome [BR:oke03041]     118396648 (sf3b3)    03036 Chromosome and associated proteins [BR:oke03036]     118396648 (sf3b3) Transcription machinery [BR:oke03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      118396648 (sf3b3) Spliceosome [BR:oke03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     118396648 (sf3b3)  Complex B     118396648 (sf3b3)  Complex C    U2 SnRNP specific factors     118396648 (sf3b3) Chromosome and associated proteins [BR:oke03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      118396648 (sf3b3)     TFTC complex      118396648 (sf3b3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_EML Motif Other DBs NCBI-GeneID:  118396648 NCBI-ProteinID:  XP_035646852 LinkDB All DBs Position 17:complement(23111356..23151789) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATSMCVLKTGFLFVSSEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKEDELGVKGTV GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEAAFSVTVCRFASGG DDWYVLVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFMHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYKRNENQ LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtataacctgaccctgcagcgtgccactggcatcacccacgccatccatgga aacttctcaggaaccaagatgcaggagatagttgtttccagggggaagataattgagctg ttgcgtccagatgccaatacagggaaggttcacaccctgcttaccatggaggtgtttggc atcattcgctccctcatggccttcaggctgacaggaggaactaaagactatattgtggtg ggcagtgactcaggccgcatcgtgatccttgagtaccacccctccaagaacatgttcgag aagatccaccaggagacctttggcaagagtggatgtcgtcgcatcgtccctggacagttc ctcgccgtcgaccccaagggcagagcagtcatgataggtgccattgagaagcagaagctg gtgtacatcctgaacagagatgcagcagcgcgtctcaccatctcctctcccctggaggct cacaaggccaacacgctggtctaccatgtggtaggagttgatgtgggctttgaaaacccc atgtttgcctgtctggagatggactatgaggaagctgacaatgaccccactggcgaggct gcagccaacacccagcaaaccctgaccttttatgagctggacctgggtctgaaccacgtt gtgcgcaagtacagcgaggccctggaggagcacggcaacttcctcattacagttcctgga ggctctgatgggcccagtggagtactcatctgttcagagaattacatcacctacaaaaac tttggggaccagcctgacattcgctgtcccatcccacgcaggaggaatgacctggatgac cctgagcgaggtatgatcttcgtctgctcagccacccacaagaccaaatccatgttcttc ttcctggcccagacggagcagggtgacattttcaaggtcaccctggagaccgatgaggag atggttacagagatcaggatgaagtacttcgacaccatacctgtagccacatccatgtgc gtgctgaagaccggcttcttatttgtgtcctcggagtttggtaaccattacctgtaccag atagcccatctgggagatgacgatgaagagccagagttctcctctgccatgcccctggag gagggagataccttcttcttccagccacgccccctcaagaacctggtgctggtggacgag caggagaacctctcccccataatgtcctgccagattgctgacttggctaatgaggacact cctcagctgtatgtggcctgtggcaggggacccaaatccaccctccgtgtcctcagacat ggactggaggtatcagagatggctgtgtctgagctgcccggtaaccccaatgctgtgtgg actgtgcgccgacacattgaagatgagtttgacgcgtacatcatcgtttccttcgtcaac gccaccctggttctgtctatcggtgagaccgtagaggaagtgacagactctggctttctg gggaccacccccaccctctcctgctctctgctcggggaggatgctctggtgcaggtgtat cctgatgggatccgtcacatccgtgctgataagcgtgtgaatgagtggaagactccaggg aagaagaccattgtgcgctgcgcagtcaaccagaggcaggtggttatcgctctgaccgga ggagagctggtctactttgagatggacccttctggccagctgaatgagtacacagagagg aaggagatgtcagctgacgtggtgtgtatgagcttggccaatgtcccccctggcgagcag cgctcccgtttcctggcggtggggctggtggacaacaccgtccgcatcatctcactggac ccctcggactgtctccagcccctcagtatgcaggccctgcctgcccagcctgagtctctg tgtatagtggagatgggaggagtggagaaggaagatgagctaggagtgaagggcactgtc ggctttctctacctcaacatcggactgcagaatggtgtgttgctcaggaccgtgctggac ccagtgactggagacctgtctgatactcgtactcggtacttggggtcgcgacctgtgaag ctcttccgcgtcaggatgcagggacaggaagctgtgttggccatgtcgagtcgctcctgg ctgagttattcctaccagtcccgattccatctgacgcccctgtcctatgagacgctggaa tatgcctctggcttcgcctctgaacagtgtccagagggcattgtggcaatctctaccaac accctgaggattctggccttggagaagctgggtgccgtgttcaaccaggtggccttcccc ctgcagtacacacctcgcaagtttgtcattcacccagagacaaacaacctgatactcata gagactgatcacaatgcctacacagaggccaccaaggcccagcgcaagcagcagatggca gaggagatggttgaggcagctggtgaggatgagagggagctggcagcagagatggctgct gccttcctcaatgagaacctgccagaggccatctttggggcgcccaaggccgggtctggc cagtgggcctctctggtgcgtctggtcaaccccatccagggaaccactctggaccttgtc caactggagcagaatgaggctgcctttagtgtgactgtttgtcggtttgccagcggaggt gatgactggtatgtgctggttggggtggcccgggacatgatccttaacccccgctctgtg ggaggcggttttatctacacctatcggctgggagggggaggggacaaactggagtttatg cacaagactccagtggaggacgttcctctggcaatcgctccattccagggccgtgtgctg gtgggcgttggcaaactgctgcgcatctatgacctgggcaagaagaagctgctccggaag tgtgagaacaagcatgtgcccaacctggtgactggtatccacaccatcggtcagcgggtc atagtgactgatgtacaggagagtctgttctgggtgcgctacaagcgtaacgagaatcag ctgatcatcttcgctgacgacacccaccctcgctgggtcaccactgcctgcctgctggac tacgacaccatggcttcagccgacaagtttggcaacatcagcattgtgcgccttccccct aacaccagtgacgatgtggatgaggacccaactgggaacaaagcattgtgggatagaggt ctgctgaacggagcttctcagaaggctgaagtgatcatgaactaccacattggggagacg gtgctgtcactgcagaagaccacactgatccccggaggctcggaatctctggtctacaca actctgtctggaggcatcggcatcctggtgcccttcacttcccacgaggatcatgacttc ttccagcacttagagatgcatatgcgctcagagttcccccctctgtgtggcagggaccac ctcagcttccgctcctactacttccccgtaaagaatgtgattgatggagatctgtgtgag cagttcaactccatggacccccacaagcagaagagtgttgctgaggagctggaccgtaca ccacctgaggtctcaaagaaactggaggacatccgcacacgctatgccttctag

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