Oncorhynchus keta (chum salmon): 118396820
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Entry
118396820 CDS
T09424
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118396820
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118396820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
118396820
NCBI-ProteinID:
XP_052323293
LinkDB
All DBs
Position
18:8689224..8770745
Genome browser
AA seq
2163 aa
AA seq
DB search
MSSRRYANFFVLGVTFLVFLTFSKCGTLVRRSARKGHEMQRRTAGRYQHATVNDQVYQTQ
WRMTTTSKPKLKQKQYHFNGKKYWKYATNVTLQLNGTNVCGNRCCHGWTVSPKTQKCTKP
RCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWAFLRPTSPMVSTTTTLS
PTTTLSPTTVIPNTTPVPTETTAAWRTEGTPVSTVRWKPLTLQEAQSVLLKKALARGGRG
DKMTSILMKHIETERKKLQSASPSDLQDTRTTSVKSFHTQKGQYTIHVSPPAARNQTAGH
RGGTAAGAGRRGAERIKVLFTPTVCKVRCTQGRCTNFCEQGNVTALYISEQGDRAALGPG
FRVFLCPMLCQNGGVCIQKDRCLCPLTFTGKFCHIPVATPSTNDIEKPPRSPSMLASQQL
LSQSEYILPLQSQQQSHSQPSGASGSSMVKVRVQHPPEASVKIHQVLKVGYGPGTVREQS
ETVTWSAGLSGASTSVLPGERAAAIPPKPRVQAQTLHGNSTNTESSVFKYCFREVRNGQC
SSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGSCPAGFERINGTQCVDVNECL
QPGFCENGNCVNTRGSYSCVCRQGYILDASHGICISHRVISEDKGQCYRILNSGSGRGSC
SVPILRNITKQICCCSRVGKAWGENCERCPYFGSVAFKEICPAGPGYHYSASVIQFNQRL
LEQHGTGGPPVISQSTGQTSPQQPASSGAQTPQTSHQQSSGSLTPQTRPQQPGITTLLTT
PTRPQQPGGGALTLQTRPQQPSVEQWSSGGSLSSQGRPHIPASSVTAGPTRVVTARPLTQ
TQWPPVDRQPVSPVRPAQPLPPLVTPRPPIPRPVRGVCETMPQVCGQGRCVNQPGGRHTC
ICNEGYQLNAQQTRCQDIDECRASPPPCGSGRCQNTEGGFRCSCPSGYQPGPRGTSCIDI
DECRQVPNPCNNGRCENSPGSFKCVCRTGYALEGNACKDVDECEDPLRCPVQACANSPGS
YKCVSCPPGFGLLNEQCSDVDECHQTPSLCTNGRCENTPGSYRCVCHTGYKRQGKTCTDV
DECEDPLRCPGQACVNSQGSYNCVSCKPGFSMINGQCSDIDECRQTPSPCTTGHCENTQG
SYSCACLTGYRLHGDTCTDVDECADPSQCPGQECVNSLGSYKCVSCKPGFGLVDRHCTDV
DECLRSPTPCANGRCENTAGSYKCACRSGFRLQGNTCGDVDECENALQCPGRQCINSEGS
FICVACSPGFEAGNGQCTDIDECRQTSNLCANGRCENTPGSYRCVCRTGFTPQGSICIDL
DECEDPSQCPGQRCVNSEGSYKCIACKAGHGMRDGLCADVDECQSPDTCGAARLCVNTDG
SYRCDCQPGYRTAGLGRQCRDVNECLEGEYCFPRGECVNTEGSYRCVCSQGYTTSSDSSS
CLDVDECARSGPGACQDGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQR
CENTVGSYRCITSCEPGYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYT
ATSDGKGCVDENECETMQGVCGAAHCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGRP
AYPGGSSSSSSSSTTGLGPQRRPDASQLPPARPGEFRECYYSTGEQSSCSILARNTTQQE
CCCTVGQGWGMGCQYDPCPPLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCK
SGVCVNNIPGYSCYCTIGYYYDDVFLECIDVDECEAGEDSCPGGICVNILGSHFCTCEPP
LVLDDTQRSCVNSTDLAVDENLSFCWQFVTADLVCQSPLLGGQVTFTECCCLYGEGWGLH
CALCPARDSEDYEARCNVFLGPPEFPPPFPDPYGPDPGPGPGRGGEGGGGVGYRVPNGPD
SFPDPIPRRPEYPQPDYDDYTPAGGSRSGFRSRTPSTFSVPESPYRRPSGYIPERYYDED
DYGPPDAPPRPHFRTLPDPRSELAFGARPRPPIREGLPLSLAPLSDSDPYSEEEEEEEEG
PDPWRVGPPFPSFPDRQGPGGGGPRRVYERRYEPYAGLSTEDCGILHGCENGRCIRVAEG
YTCDCYEGYELDMTSMACIDINECVDLDNACTNGRCIDTDGSYRCVCHRGYVMSRRPNHC
VAA
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaactttttcgttcttggagtgacatttcttgtatttctt
acattttcgaaatgtgggacactagtgaggcgttcagcccgtaaagggcacgagatgcag
aggcgaacggcgggcaggtaccaacacgcaaccgtgaatgatcaagtttatcagactcag
tggagaatgacgacgacttcaaaacccaaattaaaacagaaacagtaccattttaatgga
aagaaatactggaaatacgcaacaaatgtcacacttcagttaaatgggactaacgtctgt
ggaaacaggtgctgccacggatggaccgtttcacccaagactcagaaatgcaccaaacca
agatgccttccacgttgccacaacggagccgtgtgcaggcagcccaacatctgtgaatgc
cgaacgggcttctacggggcccgctgtgagtttgcaagcgtgacctatggcctcgtaggc
ctaccctgggccttcctgcgccccaccagccccatggtcagcaccaccaccaccctttca
ccaaccaccaccctctcaccaaccaccgtcatccccaacaccaccccagtgcccactgag
accacagctgcatggaggacagaggggacaccagtcagcactgtgcgctggaaacctctt
actctgcaggaggctcagtcagtgctgctaaagaaggcattggcccgtgggggccgaggc
gacaagatgacctccatcctgatgaaacacatcgagacagagcggaagaagcttcaatca
gcctcaccgtcagacctacaggacacccggaccaccagtgtcaagagcttccacacccag
aagggccagtacaccatccacgtgagcccacctgcagccagaaaccagaccgccggccac
cgaggaggaacggcagcaggggcaggaaggagaggagctgagcgcatcaaggtgctcttc
accccgaccgtctgcaaggtgcgctgcacccagggacgctgcaccaacttctgcgagcag
ggcaatgtgaccgccctctacatcagtgaacagggggaccgggctgcactgggaccgggc
ttcagagtcttcctgtgccccatgttgtgtcagaacggaggggtctgcatccagaaggac
cgctgcctctgcccgctaaccttcaccggcaagttctgccacatccccgtggccacgccc
tccaccaatgacattgagaagcctccgcgcagcccctcgatgctggccagtcagcagctg
ctgtcccagtcggagtacattctccccctgcagagccagcagcagagccacagtcagccc
agcggtgcatctggctcatccatggtgaaggtgcgggtgcagcacccaccagaggccagc
gtgaagatccaccaggtgctgaaggtgggctatgggccaggcacggttagggagcagtcg
gagacggtcacctggtcagcaggcctctcgggggccagcaccagtgttctgccaggggag
agggccgcagccataccacctaaacccagagtccaggcccagacactccacggtaactcc
accaacacagaatcttctgtgttcaagtactgcttcagggaggtccgcaacggccagtgc
agctcacctctcccaggactgaggagtcaggacacctgctgccgagggattggattggcc
tggggcatcaacgagtgtgtcctatgtccccctaacacaggaaatggagtcgatgggagc
tgtccggctggatttgagaggatcaacggcacccagtgtgttgatgttaatgagtgtttg
cagccaggcttctgtgagaacggcaactgtgtgaacactcgagggagctacagttgtgtc
tgcaggcaaggatacatactggacgcctctcacgggatctgtatctcccatagggtgatc
tcggaggataagggccagtgctatcgtatcctgaactctggctctggccgtggtagctgc
tccgtgcccatcctcaggaacatcaccaagcagatctgctgctgcagccgcgtgggcaag
gcctggggagagaactgtgagaggtgtccttactttggatcagttgctttcaaggagatc
tgcccagcagggcctggctaccactactctgcctctgtcatccagttcaaccagaggttg
ctggagcagcacgggactggaggtccccctgtcatatcccagagcacgggacagaccagc
ccacaacaaccagccagtagtggtgcacagactccccaaactagtcaccaacaatcttca
ggctctctcactccccaaaccaggcctcaacaaccaggtatcactactctgctcaccact
ccgaccagaccccaacagccaggtggtggcgctctcacgcttcagaccagaccccagcag
ccatcagtggagcagtggagcagtggaggctccctgtcctcccagggcagaccacacatt
ccagccagctctgttacagcaggacccacccgggtggtgaccgctcggcccctcactcag
acccaatggcctccagttgaccgacagccagtatctccagtgagacctgcccagcccctc
ccacctctggtcacgccccgcccacccatccccaggccagtgcggggtgtgtgtgagacc
atgccccaggtgtgtggacagggccgttgtgtgaaccagcccggagggagacatacctgc
atctgtaacgagggataccaactcaacgctcagcagactcggtgtcaagacatagacgag
tgcagggcttctcccccgccctgcggcagcggccgctgccagaacacagaagggggcttc
aggtgcagctgcccctctggataccagccgggaccccggggcaccagctgtatagatatt
gacgagtgtcgtcaggttccgaacccctgtaacaacggccgctgtgagaatagccctggt
agcttcaaatgtgtctgccgcactgggtacgcgctagagggaaacgcgtgtaaagatgtg
gatgagtgtgaggaccccttgaggtgtcctgttcaggcctgtgccaactctccaggatca
tacaagtgtgtgtcttgcccgccaggctttggcctgctcaacgaacaatgctcagacgtt
gacgagtgccatcagacccccagcctttgcaccaatggtcgttgtgagaacactcctggg
agctacaggtgtgtttgccacacaggatacaaacgacaaggcaagacctgcacagatgtg
gatgagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaattctcagggttct
tacaactgtgtgtcctgcaagccaggcttcagcatgatcaatggacaatgctcagatata
gatgagtgtcgtcagacccccagcccatgcaccaccggtcactgcgagaacactcagggt
agctacagctgtgcgtgtctcactggctacagactacacggcgatacctgtacagacgtg
gatgaatgtgcagacccgtcccagtgccctggccaggagtgtgtcaactccctgggctca
tacaagtgtgtgtcctgcaagccaggctttgggctggtcgacagacactgcacagatgtt
gacgagtgcctccgcagccccactccctgcgctaacggccgttgtgagaatacggctgga
agctacaagtgtgcgtgccgatctggcttcaggctacagggcaacacctgcggagatgtc
gatgagtgtgagaacgctctgcagtgtcctggtcggcagtgtatcaactctgagggctcc
ttcatatgtgtagcctgtagcccaggctttgaggctggaaacggacagtgtacagatatc
gatgagtgtcgccagacctccaacctatgtgccaacggtcgctgtgaaaacactccgggt
agctaccggtgtgtttgtcgcaccgggttcacaccgcagggcagcatctgtattgacctg
gatgaatgtgaagacccctcacagtgtcctgggcaacggtgtgtgaattctgaaggctcc
tacaagtgtatcgcctgcaaagcgggccacggcatgcgagatgggttatgcgcagatgtg
gatgaatgccagagccctgacacctgcggtgcagcgaggctgtgcgtgaacacggacggc
tcttaccgctgtgactgtcagccaggctacagaaccgctggcctcggacgccagtgtaga
gacgtcaacgagtgtctagagggggagtactgcttccccaggggagagtgtgtgaacaca
gagggctcctaccgctgtgtgtgctcccagggatacaccaccagcagcgacagcagctcc
tgcctggatgtggatgagtgtgccaggtcaggcccgggggcgtgccaggatggccgctgt
gtcaacacagagggctcctaccagtgccagtgccaagtgggattcaccaccaacccagag
aagacagcctgtctggatgtagatgagtgctcagagggagcagtgtgtcggtcacaacgt
tgtgagaacaccgttggctcctaccgctgtatcacctcctgtgagccgggctaccgggtc
acccgcaccggagagtgcgtcgatatcaacgagtgtgccaatgagaccgtatgcggggag
catgcgttctgccagaacctaattggaacataccagtgcatgtgtgaccagggctacaca
gccaccagcgatgggaagggatgtgtggatgaaaacgagtgtgagactatgcagggcgtg
tgtggcgcggcgcactgtgagaatgtggacggctccttcatgtgtgagtgtccaggagag
ggggaagagtttgatacgcgctcaggacagtgcctcagcacgccccgaccaggtcgtccg
gcgtaccctggcggctcctcctcttcttcgtcttcctccaccaccggtctcggtccccag
cgtcggcccgatgcgtcccagctgccccctgcccggcctggcgagttcagggagtgttac
tacagcaccggggagcagagctcgtgcagcatcctggcccgcaacaccacacagcaggag
tgctgctgcaccgtgggccagggctggggcatgggctgccagtacgacccctgtcctccg
ctaggcacagccgagcaccaggcgttgtgccccagcggacgaggatatgttaccgggcca
ggagcatttagctacaaagatgtggatgagtgtaagctgttccaccctgaggtgtgtaag
agcggtgtatgtgtcaacaacatccctggctactcctgctactgcaccattggctactac
tacgacgacgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggggaggacagc
tgtccagggggaatctgcgtcaacatattaggctcacacttctgtacctgcgagcctcct
cttgtgttggacgacactcagcgcagctgtgtcaattccactgacctcgccgtggatgag
aacctatcgttctgctggcagtttgtcacagcagacctggtgtgtcagagccccctgctg
ggtggacaggtcaccttcactgagtgctgctgtctgtatggagagggctggggactgcat
tgtgctctgtgtcctgccagagactcagaggactatgaggctcgctgtaacgtcttcctg
gggcccccagagtttcctccccccttccctgacccctacgggccggacccagggccagga
cccggcagaggaggagagggaggaggaggagtggggtatcgcgtgcccaatggaccggac
tccttcccagaccccatcccccgcaggcctgagtacccccagcctgactatgacgactac
acaccagcgggaggcagcaggtctggcttcagaagcagaacgcccagcaccttcagcgtc
ccagagagcccgtacagacgaccctcaggatacattcccgagcggtactatgacgaggac
gactacggcccgcctgacgctcctccgagaccccatttccggaccctcccagaccctcgt
tctgagcttgcctttggggcgcgaccccgtccccccatccgagagggcctccctctgagt
ctggcccccctctcggacagtgacccctacagtgaggaggaggaggaggaggaggagggg
ccagatccctggcgtgtgggaccccctttcccttcgttccctgacagacaggggccaggt
ggtggtggcccacggagagtctatgagagacgatatgagccgtatgcaggcctgagcaca
gaggactgtgggatactgcacggctgtgagaacggcaggtgtatccgggtggcggaggga
tacacgtgtgactgctacgagggctacgagctggacatgacctccatggcctgcatagac
atcaatgagtgtgtggatcttgacaacgcgtgtacgaacggccgatgcatcgacacagac
ggctcctatcgctgtgtgtgtcaccggggctacgtcatgtcccggcggcccaaccactgt
gtggcagcataa
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