Oncorhynchus keta (chum salmon): 118397015
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Entry
118397015 CDS
T09424
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118397015 (rnf169)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118397015 (rnf169)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118397015 (rnf169)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118397015 (rnf169)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
118397015 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_10
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118397015
NCBI-ProteinID:
XP_035647295
LinkDB
All DBs
Position
18:complement(659782..672222)
Genome browser
AA seq
658 aa
AA seq
DB search
MKMAATGSVRSTSRLGHKCKARPADMLKTRTHSQLLTLEEARCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNIELWEMVRQSYPQRCKMRME
QRDCETGGEDIFRSPAQVSKSGEIRLEYGKQKVPINEEKEEGRRKVHHREGCGTLKHFQD
PFYGLLSDSENEEPIGKRTRNVSAFVRRTKISAGLHTNVVQRSQSCTDPVEGRRKMRVST
HLPGLDKASIAHSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVIMASSTPFMVPQSKQE
RSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRSLERPTSY
EASPTILQKWKQIEVDRQSVKVTSKGTLTNPMNEDLVFKPSPIEEKDGKPCSCSPAANKG
KEHLVMCAKTDSSGQENERTCIHNKRRLIFDQAIGETAFHQKQFTKFQTPFVALTSEETV
KECGVSFESVVVPELHCGPTSIHQNPTVVPHDINASVRICKLKSKDSQDQRKEFDIRNCA
QNQPTSRRGKKRSQKTKHLEETESGLKRPRSQSQDGCNIECAQAELYIQQVQQEREDREL
ALNLQRQFDREQQQEDKQKTSPDKYFLRSCMSSENRIKCNPRRSGRISKKNEHFNCYY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacagggtccgtcagatccaccagtagattgggacacaaatgcaaa
gccaggcccgcagatatgctgaaaactcggacacattcacagctgctaaccttggaggag
gcaaggtgtccggtttgttcggaaattttattagagcccgtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggacagttgaattcaccagtttgtgctgtcccctc
tgccggctgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagttaac
atcgaactctgggaaatggttcgacagagttacccacaacgatgcaagatgagaatggag
cagagagactgtgagactggtggagaagacattttccgctcgcctgctcaggtatccaaa
tctggagagatccgactggagtatggaaagcaaaaagtcccaatcaatgaagagaaagaa
gaggggaggaggaaagtccaccacagagagggatgtggaactctcaagcactttcaagat
cctttctatgggttgctgtcagactcggagaatgaagaacccattgggaagagaaccaga
aatgtgtctgcgtttgttagaagaacaaagatctcagctggtctacataccaatgtggtg
cagagaagccagagctgtactgatccagtagagggaaggagaaaaatgagggtatctact
catcttcctggactggacaaggcaagtattgctcacagctacaatgcaggaatccttctg
tcgtctgagaacagccgatctctttcggcacccatcattgtccaagacaagaggcatagc
tggcgaggcgtcatcatggcatcatcaacaccttttatggtcccccagtcgaaacaagag
aggtccattagccctgagagcaatgacagtatttctgaggagctgaatcacttcaagcca
atagtgtgttcgccgtgcacccctccaaagcgactacctgacgggcgagtgatggaaccc
acaattgtgaagtccaccccccggaacttattccgcagcctggaaaggcccaccagctat
gaagcgagccctactatcctccagaaatggaagcagatagaggtggaccgtcagtctgtc
aaagtgacctcgaagggtaccttgaccaaccccatgaacgaggaccttgtcttcaaacca
agccccatagaggagaaggacggcaagccctgtagctgctctccagcagcaaataaggga
aaagaacacttggttatgtgtgccaagactgattcctctgggcaagagaatgaaagaact
tgtatacataataaacgaagactgatatttgatcaggccattggagagacagccttccat
caaaaacaattcacaaagtttcaaactccatttgtagccttaaccagtgaggagactgta
aaagaatgtggggtttcttttgagtctgtggtggtacctgaattacattgtggaccaact
tcaattcatcaaaatccaaccgtagtaccacatgatataaatgccagtgttaggatttgc
aaacttaaatcaaaagactcacaggatcagagaaaagagtttgacattagaaactgtgcc
cagaaccaacctacctcaaggaggggcaagaagaggagccagaagaccaaacacctggaa
gagaccgagtctggactcaagaggccaagatcccagagccaagatggttgcaatatagag
tgtgcgcaggctgaactgtacattcaacaggttcagcaagagagagaagacagagagcta
gcgttgaatcttcaaagacagtttgacagggaacagcaacaagaagacaagcaaaagacc
agtcctgacaagtactttctccggtcctgcatgtccagtgaaaacagaatcaaatgcaat
ccacgcagatcaggaagaatttccaaaaagaatgagcactttaattgctattattaa
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