Oncorhynchus keta (chum salmon): 118397185
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Entry
118397185 CDS
T09424
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118397185
04121 Ubiquitin system [BR:
oke04121
]
118397185
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118397185
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Atypical E3
118397185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118397185
NCBI-ProteinID:
XP_035647596
LinkDB
All DBs
Position
18:complement(9016294..9020725)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSPQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGTDRIEFLIETARQLKIT
HVMQDDRSPCPQPTKHGPGGRDGPMEGGRPLPERFERGRGDYGAPARIPNGLHRIDDGGP
QQELSGQSPNNARRPMGGTVPPNLMTQGLVGAPHGLLAAVPGLNARVGGAPLTLSAPMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVQGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLALDFELKIFAEYPCGSGNMFSSLAVLVKQM
FHDSQRDSGSKMVNSGLKYVEYEKRHGAGDWRLLSELLSDAVRAFKDTPGPDVLPQPYLD
ASCSMLPTALCHMSRSAPPVRGRRRKASPEPQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSFPSVRQPPPHQEGSASHSHSSDPSPITALMSVAESPREAPSSSSSGGGLGHSSLAVR
QSSSSPMAACPAGQQRHLASRNGEPQGASNSAGGTTAALPLAGASDQGAGDPSGSSGPPL
CCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSQGAGSEVFCPSGERCPLVGSNVPW
AFMQGEIATILAGDVMVKKERDP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccccagtcatattcaaggcggcagtggtgttgttacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggtacggaccgtattgaatttctcatagagacggcaaggcagttgaaaataact
catgttatgcaggatgacaggtccccgtgtccccaacccactaaacatggcccaggtggg
agagatggacctatggagggtggcaggccacttcctgaacgctttgaaaggggaagaggg
gactacggagccccagcacggatccccaacggtctgcacagaatagatgacgggggccca
caacaagaactcagtggacagagccctaacaacgccagaagacccatggggggtaccgtt
ccgcccaatttaatgacacaaggccttgtgggggctccacacgggttgctagcagctgtg
cctggtttaaatgccagagtcgggggagcccccctcaccctctctgcccccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcagag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacaaggggccctg
ctcaccctctccggctgcacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
gggcggatctttgccttcgacgccaagctggcgctggactttgagctgaagatctttgcg
gagtacccgtgtggctcggggaacatgttctccagcctggcggtgctggtcaagcagatg
ttccacgacagccagagagactcagggagcaagatggtcaactcgggcctaaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctgctgagtgat
gcggtaagggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
gccagctgctccatgctgcccacagcgctgtgtcacatgtcccgctcggcaccgccagtc
cgcgggcgccggaggaaggcttccccagagccccagggtggagaggtagtgaccacagag
gagcagctccggcagcactggcccatggggatgtacccgggaatggctatccacctagct
gcctcatccttccccagcgttagacagccacctccccaccaggagggctcggcctcccat
tcccacagcagcgacccctcccccatcacagcactgatgagcgtggctgagtcacccaga
gaggcccctagcagcagcagtagtggtggaggcctgggccactcctccttggcagtgagg
cagagcagcagcagccccatggcggcctgccctgcggggcagcagcggcacctggcctcc
aggaatggggaacctcagggagccagcaactctgcagggggcaccacagcagctctcccc
ctggctggggcctcggaccagggagcaggggacccctccggctcctctggtccccctctc
tgctgcaccatctgccacgagcgcttggaagacactcactttgtccagtgcccctcggtt
gcggcccataagttctgcttcccttgcaccagagacttcatccggagccagggggccggc
agcgaggtgttctgccccagtggagagcggtgtcccctggtgggctccaacgtgccctgg
gccttcatgcagggagagatcgctaccatcctggctggagatgtcatggtgaagaaggag
cgcgacccgtaa
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