Oncorhynchus keta (chum salmon): 118397350
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Entry
118397350 CDS
T09424
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118397350 (trim59)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118397350 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_10
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118397350
NCBI-ProteinID:
XP_035647900
LinkDB
All DBs
Position
18:complement(16185300..16190897)
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AA seq
450 aa
AA seq
DB search
MTRAATSQVHRASLSHHPTMDNLEEDLTCSVCYSLFADPRVLPCSHTFCKSCLDNVLQVS
AVYSIWRPLRLPLKCPNCRSVVELPPTGVDALPINVSLRAIIEKFQKDSQPQPPSCPEHH
RQPLNIYCVQDRQLICGFCLTVGQHQGHPIDDLQAAFIRERQAPAHLLRRLSDHRWAEVC
ELGEQLDQEKASCEGLVRQDRQAVEQYFQGLELVLARKKEAFMGALDTASMEVSLAYNPL
IQRLKELQEEQLDLLSLGSAVEDEDSPLVFLEKVHLFRERVEALVNATLPEVTSLTITPR
AAEYLEQHWVGVTIGGLEEGPVPRVCCCAKPTILEMVLRTETGSQPGGWVRDLWQQLHPT
PPVVLLGMLLLLAAVWVNPVGGASLGFSLLSQLSQMVHGLSSELTTSLWETTGFLYAQTG
EVVWRYSSALSTLGENTYQQLASLYKTLST
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggcagcaacaagccaggtacacagagcatcattgtcccatcaccctaccatg
gataacctagaagaggacctgacatgttctgtgtgctattccctctttgctgatcctcgg
gtcctgccctgctcccacaccttctgtaagtcctgcttggacaacgtactccaagtctct
gcagtctattcaatctggcgtccgctgcggctcccactcaagtgccccaactgccgcagt
gtggtagagctcccgcctacaggtgttgatgcattgcccataaatgtctccctccgcgcc
atcattgagaagttccagaaggacagccaaccacagcccccctcctgccctgagcaccac
cgacagcccctcaacatctactgtgtccaggaccgccagctcatctgtggcttctgccta
acagtgggccagcaccagggacaccccattgatgacctgcaggcagccttcatcagggaa
aggcaggcacccgctcacctactgaggaggctctcagaccaccgctgggcagaggtgtgt
gagctgggggagcagttggatcaggagaaggccagctgcgagggcctagtgaggcaggac
cggcaggccgtggaacagtacttccaggggctggagctggtgcttgccaggaagaaagag
gcattcatgggggccctggacaccgcaagcatggaggtgtcgctggcctacaatccactc
atccagaggctgaaggagctgcaggaggagcagctggacttgttgtctctgggctcagct
gtggaagatgaagactcccccctggtgttcctggagaaggtgcatctgttccgggagagg
gtggaggcactggtaaatgccaccctgcctgaagtcacatccctcactatcaccccccgt
gctgctgagtacctggagcagcactgggtgggggtgaccatcggagggctggaggaaggg
ccggtgcctcgggtctgctgctgtgccaagcccaccattctggagatggttcttaggaca
gagaccgggagtcaacctggaggctgggtccgtgatctgtggcagcagctccatcccact
cccccagtggtgctcctggggatgctgctgctcctggcggcagtgtgggtgaatcctgtt
ggcggagcatctctgggattctccttgctgtcccagctcagtcagatggtgcacggcctg
agtagcgaactgaccacctcactatgggagacaacaggctttctgtatgcacagacaggg
gaggtggtgtggaggtacagctctgccctctccacactgggggagaacacctaccagcag
ctggcatccctctacaagaccctcagcacctga
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integrated database retrieval system
