Oncorhynchus keta (chum salmon): 118397357
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Entry
118397357 CDS
T09424
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118397357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118397357
Membrane trafficking [BR:
oke04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118397357
Protein recycling
Other Rab GTPase associated proteins
118397357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rep_N
NUDE_C
EST1
HCMV_UL139
Motif
Other DBs
NCBI-GeneID:
118397357
NCBI-ProteinID:
XP_035647908
LinkDB
All DBs
Position
18:complement(16298558..16306423)
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AA seq
491 aa
AA seq
DB search
MSHGPERRGIHVDQSELLCTKGCGFYGNVAWQGLCSKCWREEYQQTRHKQIQEDHALAER
LQMEEEAAYANNHQGAAQSQPAIAPFSKFEERKTKESRKVNTVTKFFTPSAKTPPKKDSV
PGEAQSTPSPSVSRKPLEMDRTTREFINFLKTLKPGREIFKQCRAFTESMACKRDLGADE
LSECVQDFYQNLSDRLQTHYKGSSERVESVMDEVERYMMTRLYDEVFCPETTDDEKKDLD
VQKRIRALHWVTIEMLCVPVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLTCITRCSKH
IFNAINTTKKEAASADDFLPTLIYIILKANPPRLQSNIQYITRFCNPSRLMSGEDGYYFT
NLCCAVAFIEKLDGQSLNLSAEVFELHMSGQVSPQRPQAAPSPPGSAAFSEMNERLDLLT
GLGVRQERVVEGARRLEGDLIDWRDGVEHKVQDVLERFPLEMHPPASSAIDADNVENDLL
PPPLQPQLFAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgggccggaacgtcgtgggatccatgtggaccagtcagagctgttgtgtacg
aagggatgtggtttctatggcaatgtggcctggcagggcctctgctccaagtgctggcgg
gaggagtaccaacaaaccagacacaaacagatccaggaggaccatgctctggcagagagg
ttacagatggaggaggaggcagcatacgctaacaaccaccagggggcagcccagtcccag
cctgccatcgcacccttcagcaaatttgaagagaggaaaactaaggagtcacggaaagtc
aacacagtgactaagtttttcactccctcagcaaagacaccacccaagaaagactctgtc
cctggcgaggcccagtcgaccccaagcccctcagtgagccgcaagcccttagagatggac
cgcaccacacgagagttcatcaatttcctcaagacactgaaacctggcagggagatcttc
aaacagtgccgggccttcacagagagcatggcctgcaagagggacctgggtgctgatgag
ctgtctgagtgtgttcaggacttctaccagaacctgtcagaccgcctgcaaacacactac
aaagggtcgtcggagcgcgtggagagtgtgatggacgaggtagagaggtacatgatgaca
cgtctctacgatgaggtcttttgtcctgagaccacagacgatgagaagaaagacctggat
gttcagaagagaatcagggccttgcattgggtcaccattgagatgctgtgtgtccctgtg
gatgaggagattcctgaggtgtctgataatgtggtcaaagccatcacagacgtgatagag
atggactcgaagcgtgtgcccagggacaagctgacctgcatcacgcgctgcagtaagcac
atattcaatgccatcaataccaccaagaaggaggcagcatctgctgatgacttcctgccc
accctcatctacatcatcctgaaggccaaccctccacgactgcagtccaacattcagtac
atcacccgcttctgtaaccctagccgcctcatgagcggagaggacggatactactttacc
aacctgtgctgtgcggtggccttcatagagaagctggatggccagtctctgaacctaagc
gctgaggtgtttgagctccacatgtcaggccaggtgtccccccagcggccccaggctgcc
ccctcccctccaggcagtgctgctttcagcgagatgaacgagcgtctggacctgttgacg
gggctgggcgtgaggcaggaacgcgtcgtggagggagctcgccgcctggagggtgacctc
atcgactggagggacggggtggagcacaaagtgcaggatgtgttggagaggttccccctg
gaaatgcacccccccgcctcttctgccatagacgctgacaacgtggagaacgacctcctg
cctcctcctctccagccgcagttgtttgccggctga
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integrated database retrieval system
