Oncorhynchus keta (chum salmon): 118397411
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Entry
118397411 CDS
T09424
Name
(RefSeq) pre-mRNA splicing regulator USH1G-like
KO
K21878
Usher syndrome type-1G protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118397411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118397411
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118397411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
Attacin_C
Motif
Other DBs
NCBI-GeneID:
118397411
NCBI-ProteinID:
XP_035648027
LinkDB
All DBs
Position
2:19035660..19075317
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AA seq
501 aa
AA seq
DB search
MNDKYHRAARDGYLDLLREATRKELNAPDEDGMTPTLWAAYHGNLDALRLIVGRGGDQDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALKPKLVSKLKDRAFRMAERRIKDCVKMQQKHHQRMERKFLKESVASDNSDAMSF
TSYNSSSTLNRKLPQFNTLTSNMPYSQATLHSTAKGRTKIKKKLEKKKQVDGTFKIYEDG
RKSVRSLSGLQLGQDVMFLKQGTYANSKDRSRLNIRDMFPHHDNNHDYHDDDHDDYDDDH
ADTISHISHAISDPGLHETAYSEISADSGRDSLFTRPGLGTMVFRRNYVSGGLFGIGARD
KVFVAGSEPVGRAPNVRLRGHLPRRQPSLDDAIEIGSIGSALSLQERHLQELPWEEADVG
LDEELEPENGPLETFLASQGLGEFMPIFRKEKIDLEALLLCSDQDLTSIHIPLGSRKKLL
EACKRRLDTLEEPEGIEDTDL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggcccgggatggctacctggacctactcagagaggcc
actcggaaggagctgaatgcgcctgatgaagatggaatgacaccgactttatgggctgcg
taccacggcaaccttgacgcgctccggcttattgtgggaagaggaggtgaccaggacaag
tgtgatatctgggggaacactccgctccacctggccgccgccaacggccaccacaactgc
ctatccttcctggtgtcgttcggagccaacgtgtggtgcctggacaatgactaccacacg
cccctcgacatggccgccaccaagagccacatggactgtgtccggtacctggactccatc
gccgccaagcagtcggctctcaagcccaagctggtgagcaagctgaaagacagagcattc
cgcatggcggagaggaggataaaggactgtgtgaagatgcagcagaaacaccaccagcgg
atggagaggaagttcctgaaggagagtgtagcgtcggataactcagatgccatgagcttc
actagttataacagcagcagcacgctaaaccgcaaacttcctcagttcaacactctcact
tccaatatgccatactcacaggccactcttcactccacagccaagggtaggaccaagatt
aagaagaagctagagaagaagaaacaggtggatggcaccttcaagatctatgaggatggg
aggaagagtgtacgctcgctgtctggccttcagcttggccaggacgtcatgttcctcaag
cagggcacctatgccaactccaaggatcgctcgcgtctcaacatccgggacatgttccct
caccacgacaacaaccacgattaccatgacgatgatcatgacgattatgatgatgaccat
gcggacaccatctcccacatttcccatgccataagcgacccgggccttcacgagacagcc
tactctgagatcagcgccgactcaggccgcgactctttgttcacccggccaggtctcgga
accatggtgttccgacggaactacgtatccggcggtctcttcgggatcggagcccgggac
aaggtttttgtggctggcagtgaacccgtaggccgggcccctaacgttcgtctccgtggc
cacctcccacgtcgccagcccagcctggacgatgcaatagagataggcagcatcggcagt
gccctgagcctccaggagaggcacctacaggagctgccctgggaggaggctgatgtgggc
ctggacgaggagctggagcctgaaaacggcccactggagaccttcctggcatcccagggc
ctgggggagttcatgcccatcttcaggaaggagaaaatcgacctggaggccctactgctc
tgctcggaccaggacctgacctccatacacatccccctgggatccaggaagaagctacta
gaggcatgtaagagacggttggacaccctggaggaaccagagggcatcgaggacactgat
ctctga
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